RNA–Protein interactions for RNA: ENST00000554615.1

SEC23A-207, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 1 (best)

Gene SEC23A, Length 3,813 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-207ENST00000554615 NAPRTQ6XQN6 538 aa3.53□□□□□ -1.84
SEC23A-207ENST00000554615 DSTYKQ6XUX3 929 aa3.53□□□□□ -1.84
SEC23A-207ENST00000554615 ZNF783Q6ZMS7 281 aa3.53□□□□□ -1.84
SEC23A-207ENST00000554615 LRRC74BQ6ZQY2 392 aa3.53□□□□□ -1.84
SEC23A-207ENST00000554615 ARMCX2Q7L311 632 aa3.53□□□□□ -1.84
SEC23A-207ENST00000554615 SETD3Q86TU7 594 aaPredicted RBP3.53□□□□□ -1.84
SEC23A-207ENST00000554615 ULK2Q8IYT8 1036 aa3.53□□□□□ -1.84
SEC23A-207ENST00000554615 PGAM4Q8N0Y7 254 aa3.53□□□□□ -1.84
SEC23A-207ENST00000554615 ARHGAP18Q8N392 663 aa3.53□□□□□ -1.84
SEC23A-207ENST00000554615 GALNT6Q8NCL4 622 aa3.53□□□□□ -1.84
SEC23A-207ENST00000554615 RP9Q8TA86 221 aaKnown RBP3.53□□□□□ -1.84
SEC23A-207ENST00000554615 NSMCE1Q8WV22 266 aa3.53□□□□□ -1.84
SEC23A-207ENST00000554615 ANKRD36BP1Q96IX9 119 aa3.53□□□□□ -1.84
SEC23A-207ENST00000554615 ECSITQ9BQ95 431 aa3.53□□□□□ -1.84
SEC23A-207ENST00000554615 CCDC77Q9BR77 488 aa3.53□□□□□ -1.84
SEC23A-207ENST00000554615 IQCGQ9H095 443 aaKnown RBP3.53□□□□□ -1.84
SEC23A-207ENST00000554615 CXCL16Q9H2A7 254 aa3.53□□□□□ -1.84
SEC23A-207ENST00000554615 KLF15Q9UIH9 416 aa3.53□□□□□ -1.84
SEC23A-207ENST00000554615 PCDHB4Q9Y5E5 795 aa3.53□□□□□ -1.84
SEC23A-207ENST00000554615 PCDHA9Q9Y5H5 950 aa3.53□□□□□ -1.84
SEC23A-207ENST00000554615 MAGEA13PA6NCF6 341 aa3.52□□□□□ -1.85
SEC23A-207ENST00000554615 K7ERI5 159 aa3.52□□□□□ -1.85
SEC23A-207ENST00000554615 UPK1AO00322 258 aa3.52□□□□□ -1.85
SEC23A-207ENST00000554615 APOL1O14791 398 aa3.52□□□□□ -1.85
SEC23A-207ENST00000554615 MAFKO60675 156 aa3.52□□□□□ -1.85
SEC23A-207ENST00000554615 KRT1P04264 644 aa3.52□□□□□ -1.85
SEC23A-207ENST00000554615 ATXN1LP0C7T5 689 aaKnown RBP3.52□□□□□ -1.85
SEC23A-207ENST00000554615 MAGEA2P43356 314 aa3.52□□□□□ -1.85
SEC23A-207ENST00000554615 PHKA2P46019 1235 aa3.52□□□□□ -1.85
SEC23A-207ENST00000554615 GTF2A1P52655 376 aaPredicted RBP3.52□□□□□ -1.85
SEC23A-207ENST00000554615 CRYBB1P53674 252 aaPredicted RBP3.52□□□□□ -1.85
SEC23A-207ENST00000554615 ADARB1P78563 741 aaKnown RBP3.52□□□□□ -1.85
SEC23A-207ENST00000554615 RING1Q06587 406 aa3.52□□□□□ -1.85
SEC23A-207ENST00000554615 HADHQ16836 314 aaKnown RBP3.52□□□□□ -1.85
SEC23A-207ENST00000554615 ARHGAP44Q17R89 818 aa3.52□□□□□ -1.85
SEC23A-207ENST00000554615 IQCCQ4KMZ1 466 aa3.52□□□□□ -1.85
SEC23A-207ENST00000554615 VARS2Q5ST30 1063 aaKnown RBP3.52□□□□□ -1.85
SEC23A-207ENST00000554615 MSANTD1Q6ZTZ1 278 aa3.52□□□□□ -1.85
SEC23A-207ENST00000554615 MICALL2Q8IY33 904 aa3.52□□□□□ -1.85
SEC23A-207ENST00000554615 FBXO27Q8NI29 283 aa3.52□□□□□ -1.85
SEC23A-207ENST00000554615 HM13Q8TCT9 377 aa3.52□□□□□ -1.85
SEC23A-207ENST00000554615 BPIFB1Q8TDL5 484 aa3.52□□□□□ -1.85
SEC23A-207ENST00000554615 LZICQ8WZA0 190 aa3.52□□□□□ -1.85
SEC23A-207ENST00000554615 FGF11Q92914 225 aa3.52□□□□□ -1.85
SEC23A-207ENST00000554615 PPP2R3CQ969Q6 453 aa3.52□□□□□ -1.85
SEC23A-207ENST00000554615 ROPN1LQ96C74 230 aa3.52□□□□□ -1.85
SEC23A-207ENST00000554615 TEKT5Q96M29 485 aa3.52□□□□□ -1.85
SEC23A-207ENST00000554615 ZNF641Q96N77 438 aaPredicted RBP3.52□□□□□ -1.85
SEC23A-207ENST00000554615 LRRC37BQ96QE4 947 aa3.52□□□□□ -1.85
SEC23A-207ENST00000554615 SMC6Q96SB8 1091 aa3.52□□□□□ -1.85
SEC23A-207ENST00000554615 PITPNM3Q9BZ71 974 aa3.52□□□□□ -1.85
SEC23A-207ENST00000554615 KIF9Q9HAQ2 790 aa3.52□□□□□ -1.85
SEC23A-207ENST00000554615 ETNK1Q9HBU6 452 aa3.52□□□□□ -1.85
SEC23A-207ENST00000554615 PPANQ9NQ55 473 aaKnown RBP3.52□□□□□ -1.85
SEC23A-207ENST00000554615 TMEM30AQ9NV96 361 aa3.52□□□□□ -1.85
SEC23A-207ENST00000554615 TBCCD1Q9NVR7 557 aa3.52□□□□□ -1.85
SEC23A-207ENST00000554615 TMEM248Q9NWD8 314 aa3.52□□□□□ -1.85
SEC23A-207ENST00000554615 KIAA1522Q9P206 1035 aaPredicted RBP3.52□□□□□ -1.85
SEC23A-207ENST00000554615 SFMBT1Q9UHJ3 866 aa3.52□□□□□ -1.85
SEC23A-207ENST00000554615 COMMD3-BMI1R4GMX3 469 aa3.52□□□□□ -1.85
SEC23A-207ENST00000554615 KIAA1549Q9HCM3 1950 aa3.52□□□□□ -1.85
SEC23A-207ENST00000554615 MN1Q10571 1320 aaPredicted RBP3.52□□□□□ -1.85
SEC23A-207ENST00000554615 TSPAN11A1L157 253 aa3.52□□□□□ -1.85
SEC23A-207ENST00000554615 ASPDHA6ND91 283 aa3.52□□□□□ -1.85
SEC23A-207ENST00000554615 M0QX08 132 aa3.52□□□□□ -1.85
SEC23A-207ENST00000554615 CACNB4O00305 520 aaPredicted RBP3.52□□□□□ -1.85
SEC23A-207ENST00000554615 FCHO1O14526 889 aa3.52□□□□□ -1.85
SEC23A-207ENST00000554615 ZBTB14O43829 449 aa3.52□□□□□ -1.85
SEC23A-207ENST00000554615 FZD6O60353 706 aa3.52□□□□□ -1.85
SEC23A-207ENST00000554615 CABYRO75952 493 aa3.52□□□□□ -1.85
SEC23A-207ENST00000554615 KIAA0754O94854 1291 aa3.52□□□□□ -1.85
SEC23A-207ENST00000554615 OLFM2O95897 454 aa3.52□□□□□ -1.85
SEC23A-207ENST00000554615 HPRP00739 348 aa3.52□□□□□ -1.85
SEC23A-207ENST00000554615 CD4P01730 458 aa3.52□□□□□ -1.85
SEC23A-207ENST00000554615 PYGLP06737 847 aa3.52□□□□□ -1.85
SEC23A-207ENST00000554615 UQCRBP14927 111 aa3.52□□□□□ -1.85
SEC23A-207ENST00000554615 KRT4P19013 534 aa3.52□□□□□ -1.85
SEC23A-207ENST00000554615 GPX3P22352 226 aa3.52□□□□□ -1.85
SEC23A-207ENST00000554615 MYF6P23409 242 aa3.52□□□□□ -1.85
SEC23A-207ENST00000554615 DCKP27707 260 aa3.52□□□□□ -1.85
SEC23A-207ENST00000554615 ADORA2AP29274 412 aa3.52□□□□□ -1.85
SEC23A-207ENST00000554615 MAP2K2P36507 400 aa3.52□□□□□ -1.85
SEC23A-207ENST00000554615 NDST2P52849 883 aa3.52□□□□□ -1.85
SEC23A-207ENST00000554615 SOX10P56693 466 aa3.52□□□□□ -1.85
SEC23A-207ENST00000554615 ABCE1P61221 599 aaKnown RBP3.52□□□□□ -1.85
SEC23A-207ENST00000554615 PDE1BQ01064 536 aa3.52□□□□□ -1.85
SEC23A-207ENST00000554615 BST1Q10588 318 aa3.52□□□□□ -1.85
SEC23A-207ENST00000554615 TCP10Q12799 353 aa3.52□□□□□ -1.85
SEC23A-207ENST00000554615 DLG1Q12959 904 aa3.52□□□□□ -1.85
SEC23A-207ENST00000554615 ADGRE1Q14246 886 aa3.52□□□□□ -1.85
SEC23A-207ENST00000554615 ATP6AP1Q15904 470 aa3.52□□□□□ -1.85
SEC23A-207ENST00000554615 UPP1Q16831 310 aa3.52□□□□□ -1.85
SEC23A-207ENST00000554615 ZC3H12BQ5HYM0 836 aaKnown RBP3.52□□□□□ -1.85
SEC23A-207ENST00000554615 EFHC1Q5JVL4 640 aa3.52□□□□□ -1.85
SEC23A-207ENST00000554615 ATG16L1Q676U5 607 aa3.52□□□□□ -1.85
SEC23A-207ENST00000554615 HMBOX1Q6NT76 420 aa3.52□□□□□ -1.85
SEC23A-207ENST00000554615 CLEC20AQ6ZU45 233 aa3.52□□□□□ -1.85
SEC23A-207ENST00000554615 SNX20Q7Z614 316 aa3.52□□□□□ -1.85
SEC23A-207ENST00000554615 PPM1KQ8N3J5 372 aa3.52□□□□□ -1.85
SEC23A-207ENST00000554615 MPP5Q8N3R9 675 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms