RNA–Protein interactions for RNA: ENST00000553039.1

CKAP4-203, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 4

Gene CKAP4, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-203ENST00000553039 SAMD5Q5TGI4 173 aa5.39□□□□□ -1.55
CKAP4-203ENST00000553039 ADALQ6DHV7 355 aa5.39□□□□□ -1.55
CKAP4-203ENST00000553039 CAPRIN2Q6IMN6 1127 aaKnown RBP5.39□□□□□ -1.55
CKAP4-203ENST00000553039 ZCCHC8Q6NZY4 707 aaKnown RBP5.39□□□□□ -1.55
CKAP4-203ENST00000553039 SPATS2Q86XZ4 545 aaKnown RBP5.39□□□□□ -1.55
CKAP4-203ENST00000553039 DCP2Q8IU60 420 aaKnown RBP5.39□□□□□ -1.55
CKAP4-203ENST00000553039 OR14C36Q8NHC7 312 aa5.39□□□□□ -1.55
CKAP4-203ENST00000553039 GPBAR1Q8TDU6 330 aa5.39□□□□□ -1.55
CKAP4-203ENST00000553039 WFIKKN2Q8TEU8 576 aa5.39□□□□□ -1.55
CKAP4-203ENST00000553039 DDI1Q8WTU0 396 aa5.39□□□□□ -1.55
CKAP4-203ENST00000553039 GATAD2BQ8WXI9 593 aa5.39□□□□□ -1.55
CKAP4-203ENST00000553039 NAT6Q93015 286 aa5.39□□□□□ -1.55
CKAP4-203ENST00000553039 RELTQ969Z4 430 aa5.39□□□□□ -1.55
CKAP4-203ENST00000553039 MYLPFQ96A32 169 aa5.39□□□□□ -1.55
CKAP4-203ENST00000553039 ARRDC3Q96B67 414 aa5.39□□□□□ -1.55
CKAP4-203ENST00000553039 TMEM159Q96B96 161 aa5.39□□□□□ -1.55
CKAP4-203ENST00000553039 ZNF274Q96GC6 653 aaPredicted RBP5.39□□□□□ -1.55
CKAP4-203ENST00000553039 B3GNT4Q9C0J1 378 aa5.39□□□□□ -1.55
CKAP4-203ENST00000553039 ELOVL4Q9GZR5 314 aa5.39□□□□□ -1.55
CKAP4-203ENST00000553039 HAPLN2Q9GZV7 340 aa5.39□□□□□ -1.55
CKAP4-203ENST00000553039 RSPH9Q9H1X1 276 aaPredicted RBP5.39□□□□□ -1.55
CKAP4-203ENST00000553039 TMEM245Q9H330 911 aa5.39□□□□□ -1.55
CKAP4-203ENST00000553039 PABPC3Q9H361 631 aaKnown RBP5.39□□□□□ -1.55
CKAP4-203ENST00000553039 SNX25Q9H3E2 840 aa5.39□□□□□ -1.55
CKAP4-203ENST00000553039 ZFAND3Q9H8U3 227 aa5.39□□□□□ -1.55
CKAP4-203ENST00000553039 EBF2Q9HAK2 575 aa5.39□□□□□ -1.55
CKAP4-203ENST00000553039 DDX19AQ9NUU7 478 aaKnown RBP5.39□□□□□ -1.55
CKAP4-203ENST00000553039 KCND2Q9NZV8 630 aa5.39□□□□□ -1.55
CKAP4-203ENST00000553039 MAPK8IP1Q9UQF2 711 aa5.39□□□□□ -1.55
CKAP4-203ENST00000553039 CSNK1G3Q9Y6M4 447 aa5.39□□□□□ -1.55
CKAP4-203ENST00000553039 WASF2Q9Y6W5 498 aa5.39□□□□□ -1.55
CKAP4-203ENST00000553039 MYOFQ9NZM1 2061 aa5.38□□□□□ -1.55
CKAP4-203ENST00000553039 ARID1BQ8NFD5 2236 aaPredicted RBP5.38□□□□□ -1.55
CKAP4-203ENST00000553039 A0A1B0GTH6 734 aa5.38□□□□□ -1.55
CKAP4-203ENST00000553039 A0A1W2PNU3 283 aaPredicted RBP5.38□□□□□ -1.55
CKAP4-203ENST00000553039 EME2A4GXA9 379 aaPredicted RBP5.38□□□□□ -1.55
CKAP4-203ENST00000553039 K7ESM1 405 aa5.38□□□□□ -1.55
CKAP4-203ENST00000553039 WNT9AO14904 365 aa5.38□□□□□ -1.55
CKAP4-203ENST00000553039 TLR5O60602 858 aa5.38□□□□□ -1.55
CKAP4-203ENST00000553039 FBXO24O75426 580 aa5.38□□□□□ -1.55
CKAP4-203ENST00000553039 LDHAP00338 332 aaKnown RBP5.38□□□□□ -1.55
CKAP4-203ENST00000553039 PIGRP01833 764 aa5.38□□□□□ -1.55
CKAP4-203ENST00000553039 IGHDP01880 384 aa5.38□□□□□ -1.55
CKAP4-203ENST00000553039 PRKCGP05129 697 aa5.38□□□□□ -1.55
CKAP4-203ENST00000553039 DLDP09622 509 aaKnown RBP5.38□□□□□ -1.55
CKAP4-203ENST00000553039 ZDHHC11BP0C7U3 371 aa5.38□□□□□ -1.55
CKAP4-203ENST00000553039 PTPN1P18031 435 aaKnown RBP5.38□□□□□ -1.55
CKAP4-203ENST00000553039 PLCG1P19174 1290 aa5.38□□□□□ -1.55
CKAP4-203ENST00000553039 POLR2EP19388 210 aaKnown RBP5.38□□□□□ -1.55
CKAP4-203ENST00000553039 GNLYP22749 145 aa5.38□□□□□ -1.55
CKAP4-203ENST00000553039 GUCY2CP25092 1073 aa5.38□□□□□ -1.55
CKAP4-203ENST00000553039 LMO2P25791 158 aa5.38□□□□□ -1.55
CKAP4-203ENST00000553039 POLR2BP30876 1174 aaKnown RBP5.38□□□□□ -1.55
CKAP4-203ENST00000553039 SLC8A1P32418 973 aa5.38□□□□□ -1.55
CKAP4-203ENST00000553039 MCM7P33993 719 aa5.38□□□□□ -1.55
CKAP4-203ENST00000553039 UGT1A5P35504 534 aa5.38□□□□□ -1.55
CKAP4-203ENST00000553039 SOX18P35713 384 aa5.38□□□□□ -1.55
CKAP4-203ENST00000553039 ACOT2P49753 483 aa5.38□□□□□ -1.55
CKAP4-203ENST00000553039 ZNF165P49910 485 aa5.38□□□□□ -1.55
CKAP4-203ENST00000553039 MLLT10P55197 1068 aa5.38□□□□□ -1.55
CKAP4-203ENST00000553039 WDR4P57081 412 aaKnown RBP5.38□□□□□ -1.55
CKAP4-203ENST00000553039 HNRNPKP61978 463 aaKnown RBP eCLIP5.38□□□□□ -1.55
CKAP4-203ENST00000553039 CCDC15Q0P6D6 951 aa5.38□□□□□ -1.55
CKAP4-203ENST00000553039 KCNMA1Q12791 1236 aa5.38□□□□□ -1.55
CKAP4-203ENST00000553039 ORC2Q13416 577 aaPredicted RBP5.38□□□□□ -1.55
CKAP4-203ENST00000553039 KCNJ12Q14500 433 aa5.38□□□□□ -1.55
CKAP4-203ENST00000553039 SOWAHAQ2M3V2 549 aa5.38□□□□□ -1.55
CKAP4-203ENST00000553039 ZXDCQ2QGD7 858 aaPredicted RBP5.38□□□□□ -1.55
CKAP4-203ENST00000553039 LACTB2Q53H82 288 aaPredicted RBP5.38□□□□□ -1.55
CKAP4-203ENST00000553039 KRT79Q5XKE5 535 aa5.38□□□□□ -1.55
CKAP4-203ENST00000553039 KLHDC10Q6PID8 442 aa5.38□□□□□ -1.55
CKAP4-203ENST00000553039 EFL1Q7Z2Z2 1120 aaKnown RBP5.38□□□□□ -1.55
CKAP4-203ENST00000553039 OSTM1Q86WC4 334 aa5.38□□□□□ -1.55
CKAP4-203ENST00000553039 DAW1Q8N136 415 aa5.38□□□□□ -1.55
CKAP4-203ENST00000553039 C19orf47Q8N9M1 422 aaKnown RBP5.38□□□□□ -1.55
CKAP4-203ENST00000553039 OR6B3Q8NGW1 331 aa5.38□□□□□ -1.55
CKAP4-203ENST00000553039 APOBEC4Q8WW27 367 aaKnown RBP5.38□□□□□ -1.55
CKAP4-203ENST00000553039 SORCS1Q8WY21 1168 aa5.38□□□□□ -1.55
CKAP4-203ENST00000553039 KCNN1Q92952 543 aa5.38□□□□□ -1.55
CKAP4-203ENST00000553039 ABHD17AQ96GS6 310 aa5.38□□□□□ -1.55
CKAP4-203ENST00000553039 PCED1BQ96HM7 432 aa5.38□□□□□ -1.55
CKAP4-203ENST00000553039 CEP63Q96MT8 703 aa5.38□□□□□ -1.55
CKAP4-203ENST00000553039 JAKMIP1Q96N16 626 aaKnown RBP5.38□□□□□ -1.55
CKAP4-203ENST00000553039 AIFM3Q96NN9 605 aa5.38□□□□□ -1.55
CKAP4-203ENST00000553039 HAPLN3Q96S86 360 aa5.38□□□□□ -1.55
CKAP4-203ENST00000553039 CDK5RAP1Q96SZ6 601 aaKnown RBP5.38□□□□□ -1.55
CKAP4-203ENST00000553039 IL12RB2Q99665 862 aa5.38□□□□□ -1.55
CKAP4-203ENST00000553039 SLC12A9Q9BXP2 914 aa5.38□□□□□ -1.55
CKAP4-203ENST00000553039 AGXT2Q9BYV1 514 aa5.38□□□□□ -1.55
CKAP4-203ENST00000553039 BHLHE41Q9C0J9 482 aaPredicted RBP5.38□□□□□ -1.55
CKAP4-203ENST00000553039 CRTAC1Q9NQ79 661 aa5.38□□□□□ -1.55
CKAP4-203ENST00000553039 IL37Q9NZH6 218 aa5.38□□□□□ -1.55
CKAP4-203ENST00000553039 AKAP7Q9P0M2 348 aaPredicted RBP5.38□□□□□ -1.55
CKAP4-203ENST00000553039 AGO2Q9UKV8 859 aaKnown RBP5.38□□□□□ -1.55
CKAP4-203ENST00000553039 ITGA11Q9UKX5 1188 aa5.38□□□□□ -1.55
CKAP4-203ENST00000553039 ARID2Q68CP9 1835 aa5.38□□□□□ -1.55
CKAP4-203ENST00000553039 ATP8B3O60423 1300 aa5.38□□□□□ -1.55
CKAP4-203ENST00000553039 MYO16Q9Y6X6 1858 aa5.37□□□□□ -1.55
CKAP4-203ENST00000553039 A0A1W2PNR3 127 aa5.37□□□□□ -1.55
CKAP4-203ENST00000553039 TARSL2A2RTX5 802 aaKnown RBP5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms