RNA–Protein interactions for RNA: ENST00000547263.1

GCN1-202, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-202ENST00000547263 PSMA2P25787 234 aa11.22□□□□□ -0.61
GCN1-202ENST00000547263 MIPP30301 263 aa11.22□□□□□ -0.61
GCN1-202ENST00000547263 ZNF135P52742 658 aaPredicted RBP11.22□□□□□ -0.61
GCN1-202ENST00000547263 ADKP55263 362 aaKnown RBP11.22□□□□□ -0.61
GCN1-202ENST00000547263 GFPT1Q06210 699 aaPredicted RBP11.22□□□□□ -0.61
GCN1-202ENST00000547263 BYSLQ13895 437 aaKnown RBP11.22□□□□□ -0.61
GCN1-202ENST00000547263 PIGHQ14442 188 aaPredicted RBP11.22□□□□□ -0.61
GCN1-202ENST00000547263 STARD3Q14849 445 aa11.22□□□□□ -0.61
GCN1-202ENST00000547263 CCDC122Q5T0U0 273 aa11.22□□□□□ -0.61
GCN1-202ENST00000547263 C6orf118Q5T5N4 469 aa11.22□□□□□ -0.61
GCN1-202ENST00000547263 RNF219Q5W0B1 726 aaPredicted RBP11.22□□□□□ -0.61
GCN1-202ENST00000547263 RALGAPA1Q6GYQ0 2036 aa11.22□□□□□ -0.61
GCN1-202ENST00000547263 TMPRSS6Q8IU80 811 aa11.22□□□□□ -0.61
GCN1-202ENST00000547263 PYROXD2Q8N2H3 581 aa11.22□□□□□ -0.61
GCN1-202ENST00000547263 SH2D3CQ8N5H7 860 aa11.22□□□□□ -0.61
GCN1-202ENST00000547263 FRMD1Q8N878 549 aa11.22□□□□□ -0.61
GCN1-202ENST00000547263 FAM71BQ8TC56 605 aa11.22□□□□□ -0.61
GCN1-202ENST00000547263 VOPP1Q96AW1 172 aa11.22□□□□□ -0.61
GCN1-202ENST00000547263 TBC1D31Q96DN5 1066 aa11.22□□□□□ -0.61
GCN1-202ENST00000547263 FAM129BQ96TA1 746 aa11.22□□□□□ -0.61
GCN1-202ENST00000547263 TRIM5Q9C035 493 aa11.22□□□□□ -0.61
GCN1-202ENST00000547263 KLC2Q9H0B6 622 aa11.22□□□□□ -0.61
GCN1-202ENST00000547263 SLC6A17Q9H1V8 727 aa11.22□□□□□ -0.61
GCN1-202ENST00000547263 PARD6AQ9NPB6 346 aa11.22□□□□□ -0.61
GCN1-202ENST00000547263 CD93Q9NPY3 652 aa11.22□□□□□ -0.61
GCN1-202ENST00000547263 WSB2Q9NYS7 404 aaPredicted RBP11.22□□□□□ -0.61
GCN1-202ENST00000547263 AKR1B15C9JRZ8 316 aaPredicted RBP11.21□□□□□ -0.61
GCN1-202ENST00000547263 SIN3BO75182 1162 aa11.21□□□□□ -0.61
GCN1-202ENST00000547263 RHOCP08134 193 aa11.21□□□□□ -0.61
GCN1-202ENST00000547263 IL1R2P27930 398 aa11.21□□□□□ -0.61
GCN1-202ENST00000547263 OR1E1P30953 314 aa11.21□□□□□ -0.61
GCN1-202ENST00000547263 HCAR3P49019 387 aa11.21□□□□□ -0.61
GCN1-202ENST00000547263 STK19P49842 368 aaPredicted RBP11.21□□□□□ -0.61
GCN1-202ENST00000547263 CLCN6P51797 869 aa11.21□□□□□ -0.61
GCN1-202ENST00000547263 RPS14P62263 151 aaKnown RBP11.21□□□□□ -0.61
GCN1-202ENST00000547263 ARF5P84085 180 aa11.21□□□□□ -0.61
GCN1-202ENST00000547263 SLC25A11Q02978 314 aaKnown RBP11.21□□□□□ -0.61
GCN1-202ENST00000547263 GNA12Q03113 381 aa11.21□□□□□ -0.61
GCN1-202ENST00000547263 DPYSL2Q16555 572 aa11.21□□□□□ -0.61
GCN1-202ENST00000547263 FNDC3BQ53EP0 1204 aaKnown RBP11.21□□□□□ -0.61
GCN1-202ENST00000547263 EFHC2Q5JST6 749 aa11.21□□□□□ -0.61
GCN1-202ENST00000547263 ERMARDQ5T6L9 678 aa11.21□□□□□ -0.61
GCN1-202ENST00000547263 SLC36A4Q6YBV0 504 aa11.21□□□□□ -0.61
GCN1-202ENST00000547263 PLPP6Q8IY26 295 aa11.21□□□□□ -0.61
GCN1-202ENST00000547263 UMODL1-AS1Q8N2C9 162 aa11.21□□□□□ -0.61
GCN1-202ENST00000547263 GPR161Q8N6U8 529 aaKnown RBP11.21□□□□□ -0.61
GCN1-202ENST00000547263 ZNF366Q8N895 744 aa11.21□□□□□ -0.61
GCN1-202ENST00000547263 RTL3Q8N8U3 475 aaKnown RBP11.21□□□□□ -0.61
GCN1-202ENST00000547263 RLN3Q8WXF3 142 aa11.21□□□□□ -0.61
GCN1-202ENST00000547263 ARHGEF2Q92974 986 aaKnown RBP11.21□□□□□ -0.61
GCN1-202ENST00000547263 ZNF419Q96HQ0 510 aaPredicted RBP11.21□□□□□ -0.61
GCN1-202ENST00000547263 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.21□□□□□ -0.61
GCN1-202ENST00000547263 SNRNP25Q9BV90 132 aaKnown RBP11.21□□□□□ -0.61
GCN1-202ENST00000547263 PACSIN1Q9BY11 444 aa11.21□□□□□ -0.61
GCN1-202ENST00000547263 MAGEH1Q9H213 219 aa11.21□□□□□ -0.61
GCN1-202ENST00000547263 NHEJ1Q9H9Q4 299 aaPredicted RBP11.21□□□□□ -0.61
GCN1-202ENST00000547263 PRDM16Q9HAZ2 1276 aa11.21□□□□□ -0.61
GCN1-202ENST00000547263 UVRAGQ9P2Y5 699 aa11.21□□□□□ -0.61
GCN1-202ENST00000547263 VPS51Q9UID3 782 aa11.21□□□□□ -0.61
GCN1-202ENST00000547263 INTUQ9ULD6 942 aa11.21□□□□□ -0.61
GCN1-202ENST00000547263 USP18Q9UMW8 372 aa11.21□□□□□ -0.61
GCN1-202ENST00000547263 SCML1Q9UN30 329 aa11.21□□□□□ -0.61
GCN1-202ENST00000547263 EP300Q09472 2414 aaPredicted RBP11.21□□□□□ -0.61
GCN1-202ENST00000547263 PCDH15Q96QU1 1955 aa11.21□□□□□ -0.62
GCN1-202ENST00000547263 EDDM13A0A1B0GTR0 161 aa11.2□□□□□ -0.62
GCN1-202ENST00000547263 BCLAF3A2AJT9 711 aaKnown RBP11.2□□□□□ -0.62
GCN1-202ENST00000547263 TTC34A8MYJ7 566 aa11.2□□□□□ -0.62
GCN1-202ENST00000547263 ALOX15BO15296 676 aa11.2□□□□□ -0.62
GCN1-202ENST00000547263 SYNCRIPO60506 623 aaKnown RBP11.2□□□□□ -0.62
GCN1-202ENST00000547263 SNAP91O60641 907 aa11.2□□□□□ -0.62
GCN1-202ENST00000547263 SRGAP2O75044 1071 aa11.2□□□□□ -0.62
GCN1-202ENST00000547263 ZNF821O75541 412 aaPredicted RBP11.2□□□□□ -0.62
GCN1-202ENST00000547263 RNF8O76064 485 aa11.2□□□□□ -0.62
GCN1-202ENST00000547263 RHOBTB1O94844 696 aa11.2□□□□□ -0.62
GCN1-202ENST00000547263 TPM1P09493 284 aa11.2□□□□□ -0.62
GCN1-202ENST00000547263 H2AFZP0C0S5 128 aa11.2□□□□□ -0.62
GCN1-202ENST00000547263 TMEM253P0C7T8 217 aa11.2□□□□□ -0.62
GCN1-202ENST00000547263 SRCP12931 536 aa11.2□□□□□ -0.62
GCN1-202ENST00000547263 TPMTP51580 245 aa11.2□□□□□ -0.62
GCN1-202ENST00000547263 HADHBP55084 474 aaKnown RBP11.2□□□□□ -0.62
GCN1-202ENST00000547263 YBEYP58557 167 aaPredicted RBP11.2□□□□□ -0.62
GCN1-202ENST00000547263 ST8SIA6P61647 398 aa11.2□□□□□ -0.62
GCN1-202ENST00000547263 SLC20A2Q08357 652 aa11.2□□□□□ -0.62
GCN1-202ENST00000547263 ELAVL3Q14576 367 aaKnown RBP11.2□□□□□ -0.62
GCN1-202ENST00000547263 CSRP2Q16527 193 aa11.2□□□□□ -0.62
GCN1-202ENST00000547263 CA9Q16790 459 aa11.2□□□□□ -0.62
GCN1-202ENST00000547263 AFMIDQ63HM1 303 aa11.2□□□□□ -0.62
GCN1-202ENST00000547263 PRR23BQ6ZRT6 265 aa11.2□□□□□ -0.62
GCN1-202ENST00000547263 USP30Q70CQ3 517 aa11.2□□□□□ -0.62
GCN1-202ENST00000547263 H2AFVQ71UI9 128 aa11.2□□□□□ -0.62
GCN1-202ENST00000547263 CEP68Q76N32 757 aa11.2□□□□□ -0.62
GCN1-202ENST00000547263 TFAP2DQ7Z6R9 452 aa11.2□□□□□ -0.62
GCN1-202ENST00000547263 DCLK2Q8N568 766 aa11.2□□□□□ -0.62
GCN1-202ENST00000547263 OR7D4Q8NG98 312 aa11.2□□□□□ -0.62
GCN1-202ENST00000547263 TEKT4Q8WW24 435 aa11.2□□□□□ -0.62
GCN1-202ENST00000547263 TSC1Q92574 1164 aa11.2□□□□□ -0.62
GCN1-202ENST00000547263 PRCCQ92733 491 aaPredicted RBP11.2□□□□□ -0.62
GCN1-202ENST00000547263 SIPA1Q96FS4 1042 aa11.2□□□□□ -0.62
GCN1-202ENST00000547263 SPACA7Q96KW9 195 aa11.2□□□□□ -0.62
GCN1-202ENST00000547263 RPL10LQ96L21 214 aaKnown RBP11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms