RNA–Protein interactions for RNA: ENST00000543359.5

TNFRSF1A-215, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 627 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-215ENST00000543359 SYPP08247 313 aa13.48□□□□□ -0.25
TNFRSF1A-215ENST00000543359 GNSP15586 552 aa13.48□□□□□ -0.25
TNFRSF1A-215ENST00000543359 OXCT1P55809 520 aa13.48□□□□□ -0.25
TNFRSF1A-215ENST00000543359 SHC2P98077 582 aa13.48□□□□□ -0.25
TNFRSF1A-215ENST00000543359 GRIK2Q13002 908 aa13.48□□□□□ -0.25
TNFRSF1A-215ENST00000543359 ZNF177Q13360 481 aaPredicted RBP13.48□□□□□ -0.25
TNFRSF1A-215ENST00000543359 CCDC14Q49A88 953 aa13.48□□□□□ -0.25
TNFRSF1A-215ENST00000543359 ANO6Q4KMQ2 910 aa13.48□□□□□ -0.25
TNFRSF1A-215ENST00000543359 TRIM72Q6ZMU5 477 aa13.48□□□□□ -0.25
TNFRSF1A-215ENST00000543359 PHLDB2Q86SQ0 1253 aa13.48□□□□□ -0.25
TNFRSF1A-215ENST00000543359 MMAAQ8IVH4 418 aaKnown RBP13.48□□□□□ -0.25
TNFRSF1A-215ENST00000543359 STK40Q8N2I9 435 aa13.48□□□□□ -0.25
TNFRSF1A-215ENST00000543359 AADATQ8N5Z0 425 aa13.48□□□□□ -0.25
TNFRSF1A-215ENST00000543359 AOPEPQ8N6M6 819 aa13.48□□□□□ -0.25
TNFRSF1A-215ENST00000543359 EMC1Q8N766 993 aa13.48□□□□□ -0.25
TNFRSF1A-215ENST00000543359 DEFB124Q8NES8 71 aa13.48□□□□□ -0.25
TNFRSF1A-215ENST00000543359 CENPIQ92674 756 aaPredicted RBP13.48□□□□□ -0.25
TNFRSF1A-215ENST00000543359 FAM131CQ96AQ9 280 aa13.48□□□□□ -0.25
TNFRSF1A-215ENST00000543359 BIRC7Q96CA5 298 aa13.48□□□□□ -0.25
TNFRSF1A-215ENST00000543359 CNTNAP3BQ96NU0 1288 aa13.48□□□□□ -0.25
TNFRSF1A-215ENST00000543359 HAPLN3Q96S86 360 aa13.48□□□□□ -0.25
TNFRSF1A-215ENST00000543359 PSMB7Q99436 277 aa13.48□□□□□ -0.25
TNFRSF1A-215ENST00000543359 BPIFA3Q9BQP9 254 aa13.48□□□□□ -0.25
TNFRSF1A-215ENST00000543359 CNTNAP3Q9BZ76 1288 aa13.48□□□□□ -0.25
TNFRSF1A-215ENST00000543359 EBF2Q9HAK2 575 aa13.48□□□□□ -0.25
TNFRSF1A-215ENST00000543359 OSGEPQ9NPF4 335 aa13.48□□□□□ -0.25
TNFRSF1A-215ENST00000543359 FBXL12Q9NXK8 326 aa13.48□□□□□ -0.25
TNFRSF1A-215ENST00000543359 DSPP15924 2871 aaKnown RBP13.48□□□□□ -0.25
TNFRSF1A-215ENST00000543359 CFAP47Q6ZTR5 3102 aa13.48□□□□□ -0.25
TNFRSF1A-215ENST00000543359 TCRBV5S1A1TA0A578 114 aa13.47□□□□□ -0.25
TNFRSF1A-215ENST00000543359 C2CD4BA6NLJ0 364 aa13.47□□□□□ -0.25
TNFRSF1A-215ENST00000543359 OPHN1O60890 802 aa13.47□□□□□ -0.25
TNFRSF1A-215ENST00000543359 GJB6O95452 261 aa13.47□□□□□ -0.25
TNFRSF1A-215ENST00000543359 MT-CO1P00395 513 aa13.47□□□□□ -0.25
TNFRSF1A-215ENST00000543359 CDK11BP21127 795 aaKnown RBP13.47□□□□□ -0.25
TNFRSF1A-215ENST00000543359 KCNA4P22459 653 aa13.47□□□□□ -0.25
TNFRSF1A-215ENST00000543359 SLC8A1P32418 973 aa13.47□□□□□ -0.25
TNFRSF1A-215ENST00000543359 GALCP54803 685 aa13.47□□□□□ -0.25
TNFRSF1A-215ENST00000543359 GSCP56915 257 aaPredicted RBP13.47□□□□□ -0.25
TNFRSF1A-215ENST00000543359 CLEC16AQ2KHT3 1053 aa13.47□□□□□ -0.25
TNFRSF1A-215ENST00000543359 TTC31Q49AM3 519 aaPredicted RBP13.47□□□□□ -0.25
TNFRSF1A-215ENST00000543359 RNF219Q5W0B1 726 aaPredicted RBP13.47□□□□□ -0.25
TNFRSF1A-215ENST00000543359 SND1Q7KZF4 910 aaKnown RBP eCLIP13.47□□□□□ -0.25
TNFRSF1A-215ENST00000543359 IRF2BP2Q7Z5L9 587 aa13.47□□□□□ -0.25
TNFRSF1A-215ENST00000543359 FAM131BQ86XD5 332 aa13.47□□□□□ -0.25
TNFRSF1A-215ENST00000543359 PHF13Q86YI8 300 aaPredicted RBP13.47□□□□□ -0.25
TNFRSF1A-215ENST00000543359 MSANTD4Q8NCY6 345 aa13.47□□□□□ -0.25
TNFRSF1A-215ENST00000543359 ANKRD20A12PQ8NF67 263 aa13.47□□□□□ -0.25
TNFRSF1A-215ENST00000543359 NEK11Q8NG66 645 aa13.47□□□□□ -0.25
TNFRSF1A-215ENST00000543359 JOSD2Q8TAC2 188 aa13.47□□□□□ -0.25
TNFRSF1A-215ENST00000543359 RXFP2Q8WXD0 754 aa13.47□□□□□ -0.25
TNFRSF1A-215ENST00000543359 SPAG5Q96R06 1193 aa13.47□□□□□ -0.25
TNFRSF1A-215ENST00000543359 C11orf70Q9BRQ4 267 aa13.47□□□□□ -0.25
TNFRSF1A-215ENST00000543359 SYT11Q9BT88 431 aa13.47□□□□□ -0.25
TNFRSF1A-215ENST00000543359 FUCA2Q9BTY2 467 aa13.47□□□□□ -0.25
TNFRSF1A-215ENST00000543359 ZDHHC5Q9C0B5 715 aa13.47□□□□□ -0.25
TNFRSF1A-215ENST00000543359 MIR1-1HGQ9H1L0 117 aa13.47□□□□□ -0.25
TNFRSF1A-215ENST00000543359 NEUROG2Q9H2A3 272 aa13.47□□□□□ -0.25
TNFRSF1A-215ENST00000543359 METTL5Q9NRN9 209 aaKnown RBP13.47□□□□□ -0.25
TNFRSF1A-215ENST00000543359 MPP6Q9NZW5 540 aa13.47□□□□□ -0.25
TNFRSF1A-215ENST00000543359 SARDHQ9UL12 918 aa13.47□□□□□ -0.25
TNFRSF1A-215ENST00000543359 CHD5Q8TDI0 1954 aa13.47□□□□□ -0.25
TNFRSF1A-215ENST00000543359 A0A0D9SEW6 157 aa13.46□□□□□ -0.25
TNFRSF1A-215ENST00000543359 A0A1W2PP55 124 aa13.46□□□□□ -0.25
TNFRSF1A-215ENST00000543359 E9PAM4 449 aa13.46□□□□□ -0.25
TNFRSF1A-215ENST00000543359 SNAP91O60641 907 aa13.46□□□□□ -0.25
TNFRSF1A-215ENST00000543359 RNASEH1O60930 286 aaKnown RBP13.46□□□□□ -0.25
TNFRSF1A-215ENST00000543359 CD27P26842 260 aa13.46□□□□□ -0.25
TNFRSF1A-215ENST00000543359 RDXP35241 583 aaKnown RBP13.46□□□□□ -0.25
TNFRSF1A-215ENST00000543359 DRD3P35462 400 aa13.46□□□□□ -0.25
TNFRSF1A-215ENST00000543359 CSNK1EP49674 416 aaKnown RBP13.46□□□□□ -0.25
TNFRSF1A-215ENST00000543359 METAP1P53582 386 aa13.46□□□□□ -0.25
TNFRSF1A-215ENST00000543359 ATXN3P54252 364 aaPredicted RBP13.46□□□□□ -0.25
TNFRSF1A-215ENST00000543359 FAM193AP78312 1265 aa13.46□□□□□ -0.25
TNFRSF1A-215ENST00000543359 SLC14A1Q13336 389 aa13.46□□□□□ -0.25
TNFRSF1A-215ENST00000543359 ELAVL3Q14576 367 aaKnown RBP13.46□□□□□ -0.25
TNFRSF1A-215ENST00000543359 DLG2Q15700 870 aa13.46□□□□□ -0.25
TNFRSF1A-215ENST00000543359 C15orf59Q2T9L4 293 aaPredicted RBP13.46□□□□□ -0.25
TNFRSF1A-215ENST00000543359 KCNT1Q5JUK3 1230 aa13.46□□□□□ -0.25
TNFRSF1A-215ENST00000543359 ACBD5Q5T8D3 534 aaPredicted RBP13.46□□□□□ -0.25
TNFRSF1A-215ENST00000543359 MANEALQ5VSG8 457 aa13.46□□□□□ -0.25
TNFRSF1A-215ENST00000543359 SETD3Q86TU7 594 aaPredicted RBP13.46□□□□□ -0.25
TNFRSF1A-215ENST00000543359 SH2D3CQ8N5H7 860 aa13.46□□□□□ -0.25
TNFRSF1A-215ENST00000543359 BAP1Q92560 729 aa13.46□□□□□ -0.25
TNFRSF1A-215ENST00000543359 PPP1R9BQ96SB3 815 aa13.46□□□□□ -0.25
TNFRSF1A-215ENST00000543359 AGPAT1Q99943 283 aa13.46□□□□□ -0.25
TNFRSF1A-215ENST00000543359 MAGEB5Q9BZ81 275 aa13.46□□□□□ -0.25
TNFRSF1A-215ENST00000543359 IL21RQ9HBE5 538 aa13.46□□□□□ -0.25
TNFRSF1A-215ENST00000543359 TM9SF3Q9HD45 589 aa13.46□□□□□ -0.25
TNFRSF1A-215ENST00000543359 RTN4Q9NQC3 1192 aaKnown RBP13.46□□□□□ -0.25
TNFRSF1A-215ENST00000543359 VPS28Q9UK41 221 aa13.46□□□□□ -0.25
TNFRSF1A-215ENST00000543359 PPM1HQ9ULR3 514 aa13.46□□□□□ -0.25
TNFRSF1A-215ENST00000543359 FZD4Q9ULV1 537 aa13.46□□□□□ -0.25
TNFRSF1A-215ENST00000543359 HS3ST2Q9Y278 367 aa13.46□□□□□ -0.25
TNFRSF1A-215ENST00000543359 PAXBP1Q9Y5B6 917 aa13.46□□□□□ -0.25
TNFRSF1A-215ENST00000543359 DOCK9Q9BZ29 2069 aa13.46□□□□□ -0.26
TNFRSF1A-215ENST00000543359 PLXNA2O75051 1894 aa13.45□□□□□ -0.26
TNFRSF1A-215ENST00000543359 A0A1B0GVT2 93 aa13.45□□□□□ -0.26
TNFRSF1A-215ENST00000543359 SMAD6O43541 496 aaKnown RBP13.45□□□□□ -0.26
TNFRSF1A-215ENST00000543359 ZNF821O75541 412 aaPredicted RBP13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms