RNA–Protein interactions for RNA: ENST00000543123.1

RTN3-212, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 712 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-212ENST00000543123 ACCSLQ4AC99 568 aa13.5□□□□□ -0.25
RTN3-212ENST00000543123 CXorf57Q6NSI4 855 aaKnown RBP13.5□□□□□ -0.25
RTN3-212ENST00000543123 LRRC31Q6UY01 552 aa13.5□□□□□ -0.25
RTN3-212ENST00000543123 DBX2Q6ZNG2 339 aa13.5□□□□□ -0.25
RTN3-212ENST00000543123 OR14C36Q8NHC7 312 aa13.5□□□□□ -0.25
RTN3-212ENST00000543123 BAHD1Q8TBE0 780 aaPredicted RBP13.5□□□□□ -0.25
RTN3-212ENST00000543123 PTPRN2Q92932 1015 aa13.5□□□□□ -0.25
RTN3-212ENST00000543123 FAM129BQ96TA1 746 aa13.5□□□□□ -0.25
RTN3-212ENST00000543123 FEM1AQ9BSK4 669 aa13.5□□□□□ -0.25
RTN3-212ENST00000543123 C2orf49Q9BVC5 232 aaPredicted RBP13.5□□□□□ -0.25
RTN3-212ENST00000543123 MUC3BQ9H195 1237 aa13.5□□□□□ -0.25
RTN3-212ENST00000543123 WDCPQ9H6R7 721 aa13.5□□□□□ -0.25
RTN3-212ENST00000543123 AASDHPPTQ9NRN7 309 aa13.5□□□□□ -0.25
RTN3-212ENST00000543123 FARP1Q9Y4F1 1045 aaPredicted RBP13.5□□□□□ -0.25
RTN3-212ENST00000543123 HS3ST4Q9Y661 456 aa13.5□□□□□ -0.25
RTN3-212ENST00000543123 NYNRINQ9P2P1 1898 aaKnown RBP13.5□□□□□ -0.25
RTN3-212ENST00000543123 FAM208BQ5VWN6 2430 aa13.5□□□□□ -0.25
RTN3-212ENST00000543123 ATP9BO43861 1147 aa13.49□□□□□ -0.25
RTN3-212ENST00000543123 CYP11B1P15538 503 aa13.49□□□□□ -0.25
RTN3-212ENST00000543123 ZNF18P17022 549 aa13.49□□□□□ -0.25
RTN3-212ENST00000543123 CD38P28907 300 aa13.49□□□□□ -0.25
RTN3-212ENST00000543123 CDH5P33151 784 aaPredicted RBP13.49□□□□□ -0.25
RTN3-212ENST00000543123 CXCR3P49682 368 aa13.49□□□□□ -0.25
RTN3-212ENST00000543123 SULT1E1P49888 294 aa13.49□□□□□ -0.25
RTN3-212ENST00000543123 CCDC15Q0P6D6 951 aa13.49□□□□□ -0.25
RTN3-212ENST00000543123 DRAP1Q14919 205 aaPredicted RBP13.49□□□□□ -0.25
RTN3-212ENST00000543123 MIIPQ5JXC2 388 aa13.49□□□□□ -0.25
RTN3-212ENST00000543123 FAM102AQ5T9C2 384 aaPredicted RBP13.49□□□□□ -0.25
RTN3-212ENST00000543123 ERICH1Q86X53 443 aa13.49□□□□□ -0.25
RTN3-212ENST00000543123 OXR1Q8N573 874 aa13.49□□□□□ -0.25
RTN3-212ENST00000543123 AADATQ8N5Z0 425 aa13.49□□□□□ -0.25
RTN3-212ENST00000543123 C18orf8Q96DM3 657 aa13.49□□□□□ -0.25
RTN3-212ENST00000543123 PGAP3Q96FM1 320 aaPredicted RBP13.49□□□□□ -0.25
RTN3-212ENST00000543123 SLC6A18Q96N87 628 aa13.49□□□□□ -0.25
RTN3-212ENST00000543123 NPY6RQ99463 290 aa13.49□□□□□ -0.25
RTN3-212ENST00000543123 ORAI3Q9BRQ5 295 aa13.49□□□□□ -0.25
RTN3-212ENST00000543123 TKTL2Q9H0I9 626 aa13.49□□□□□ -0.25
RTN3-212ENST00000543123 SIK2Q9H0K1 926 aa13.49□□□□□ -0.25
RTN3-212ENST00000543123 GDF3Q9NR23 364 aa13.49□□□□□ -0.25
RTN3-212ENST00000543123 PIGVQ9NUD9 493 aa13.49□□□□□ -0.25
RTN3-212ENST00000543123 AJAP1Q9UKB5 411 aaPredicted RBP13.49□□□□□ -0.25
RTN3-212ENST00000543123 TBC1D30Q9Y2I9 924 aa13.49□□□□□ -0.25
RTN3-212ENST00000543123 SLCO1B1Q9Y6L6 691 aa13.49□□□□□ -0.25
RTN3-212ENST00000543123 TBC1D3DA0A087WVF3 549 aa13.48□□□□□ -0.25
RTN3-212ENST00000543123 TBC1D3IA0A087WXS9 549 aa13.48□□□□□ -0.25
RTN3-212ENST00000543123 TBC1D3EA0A087X179 549 aa13.48□□□□□ -0.25
RTN3-212ENST00000543123 TBC1D3KA0A087X1G2 549 aa13.48□□□□□ -0.25
RTN3-212ENST00000543123 TBC1D3FA6NER0 549 aaPredicted RBP13.48□□□□□ -0.25
RTN3-212ENST00000543123 TBC1D3LB9A6J9 549 aa13.48□□□□□ -0.25
RTN3-212ENST00000543123 H0Y8X5 98 aa13.48□□□□□ -0.25
RTN3-212ENST00000543123 TNFSF14O43557 240 aa13.48□□□□□ -0.25
RTN3-212ENST00000543123 MAGEC1O60732 1142 aa13.48□□□□□ -0.25
RTN3-212ENST00000543123 RHOCP08134 193 aa13.48□□□□□ -0.25
RTN3-212ENST00000543123 TBC1D3HP0C7X1 549 aa13.48□□□□□ -0.25
RTN3-212ENST00000543123 PNMA6AP0CW24 399 aaPredicted RBP13.48□□□□□ -0.25
RTN3-212ENST00000543123 UCHL3P15374 230 aa13.48□□□□□ -0.25
RTN3-212ENST00000543123 GABRB2P47870 512 aa13.48□□□□□ -0.25
RTN3-212ENST00000543123 ARRB1P49407 418 aaPredicted RBP13.48□□□□□ -0.25
RTN3-212ENST00000543123 RNASE9P60153 205 aaKnown RBP13.48□□□□□ -0.25
RTN3-212ENST00000543123 DEUP1Q05D60 604 aa13.48□□□□□ -0.25
RTN3-212ENST00000543123 SLC25A52Q3SY17 297 aa13.48□□□□□ -0.25
RTN3-212ENST00000543123 C5orf22Q49AR2 442 aa13.48□□□□□ -0.25
RTN3-212ENST00000543123 KLHDC7AQ5VTJ3 777 aa13.48□□□□□ -0.25
RTN3-212ENST00000543123 TBC1D3GQ6DHY5 549 aa13.48□□□□□ -0.25
RTN3-212ENST00000543123 TBC1D3CQ6IPX1 549 aa13.48□□□□□ -0.25
RTN3-212ENST00000543123 LAYNQ6UX15 382 aa13.48□□□□□ -0.25
RTN3-212ENST00000543123 SETD3Q86TU7 594 aaPredicted RBP13.48□□□□□ -0.25
RTN3-212ENST00000543123 PRPF39Q86UA1 669 aaKnown RBP13.48□□□□□ -0.25
RTN3-212ENST00000543123 TBC1D3Q8IZP1 549 aaPredicted RBP13.48□□□□□ -0.25
RTN3-212ENST00000543123 GALNT15Q8N3T1 639 aa13.48□□□□□ -0.25
RTN3-212ENST00000543123 PNPLA1Q8N8W4 532 aa13.48□□□□□ -0.25
RTN3-212ENST00000543123 FRS2Q8WU20 508 aa13.48□□□□□ -0.25
RTN3-212ENST00000543123 SERAC1Q96JX3 654 aa13.48□□□□□ -0.25
RTN3-212ENST00000543123 ELF4Q99607 663 aaPredicted RBP13.48□□□□□ -0.25
RTN3-212ENST00000543123 PLCB1Q9NQ66 1216 aa13.48□□□□□ -0.25
RTN3-212ENST00000543123 ARHGEF38Q9NXL2 777 aa13.48□□□□□ -0.25
RTN3-212ENST00000543123 FTSJ1Q9UET6 329 aa13.48□□□□□ -0.25
RTN3-212ENST00000543123 DMTF1Q9Y222 760 aa13.48□□□□□ -0.25
RTN3-212ENST00000543123 HS3ST2Q9Y278 367 aa13.48□□□□□ -0.25
RTN3-212ENST00000543123 DAAM1Q9Y4D1 1078 aa13.48□□□□□ -0.25
RTN3-212ENST00000543123 FHOD1Q9Y613 1164 aa13.48□□□□□ -0.25
RTN3-212ENST00000543123 ANKRD11Q6UB99 2663 aaPredicted RBP13.48□□□□□ -0.25
RTN3-212ENST00000543123 KNL1Q8NG31 2342 aa13.47□□□□□ -0.25
RTN3-212ENST00000543123 PKD1L2Q7Z442 2459 aa13.47□□□□□ -0.25
RTN3-212ENST00000543123 A0A1B0GTQ1 180 aa13.47□□□□□ -0.25
RTN3-212ENST00000543123 SRRM3A6NNA2 597 aaPredicted RBP13.47□□□□□ -0.25
RTN3-212ENST00000543123 F8VZ95 297 aa13.47□□□□□ -0.25
RTN3-212ENST00000543123 MCF2LO15068 1137 aa13.47□□□□□ -0.25
RTN3-212ENST00000543123 LATO43561 262 aa13.47□□□□□ -0.25
RTN3-212ENST00000543123 CLCN6P51797 869 aa13.47□□□□□ -0.25
RTN3-212ENST00000543123 DLG2Q15700 870 aa13.47□□□□□ -0.25
RTN3-212ENST00000543123 HSP90AA4PQ58FG1 418 aa13.47□□□□□ -0.25
RTN3-212ENST00000543123 TCP11X2Q5H9J9 407 aa13.47□□□□□ -0.25
RTN3-212ENST00000543123 C6orf118Q5T5N4 469 aa13.47□□□□□ -0.25
RTN3-212ENST00000543123 NAPEPLDQ6IQ20 393 aa13.47□□□□□ -0.25
RTN3-212ENST00000543123 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.47□□□□□ -0.25
RTN3-212ENST00000543123 CCNI2Q6ZMN8 369 aaPredicted RBP13.47□□□□□ -0.25
RTN3-212ENST00000543123 ZNF677Q86XU0 584 aa13.47□□□□□ -0.25
RTN3-212ENST00000543123 SH2D3CQ8N5H7 860 aa13.47□□□□□ -0.25
RTN3-212ENST00000543123 DCAF4L2Q8NA75 395 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms