RNA–Protein interactions for RNA: ENST00000541341.5

CHFR-219, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-219ENST00000541341 SPIDRQ14159 915 aa10.65□□□□□ -0.7
CHFR-219ENST00000541341 DPYSL3Q14195 570 aa10.65□□□□□ -0.7
CHFR-219ENST00000541341 FAM187BQ17R55 369 aa10.65□□□□□ -0.7
CHFR-219ENST00000541341 BBS9Q3SYG4 887 aa10.65□□□□□ -0.7
CHFR-219ENST00000541341 CCDC14Q49A88 953 aa10.65□□□□□ -0.7
CHFR-219ENST00000541341 KAZNQ674X7 775 aa10.65□□□□□ -0.7
CHFR-219ENST00000541341 RFWD3Q6PCD5 774 aa10.65□□□□□ -0.7
CHFR-219ENST00000541341 KSR1Q8IVT5 923 aa10.65□□□□□ -0.7
CHFR-219ENST00000541341 RNF149Q8NC42 400 aa10.65□□□□□ -0.7
CHFR-219ENST00000541341 RBM15BQ8NDT2 890 aaKnown RBP10.65□□□□□ -0.7
CHFR-219ENST00000541341 UCMAQ8WVF2 138 aa10.65□□□□□ -0.7
CHFR-219ENST00000541341 NRG4Q8WWG1 115 aa10.65□□□□□ -0.7
CHFR-219ENST00000541341 NLRP7Q8WX94 980 aa10.65□□□□□ -0.7
CHFR-219ENST00000541341 ZNF606Q8WXB4 792 aa10.65□□□□□ -0.7
CHFR-219ENST00000541341 SUSD6Q92537 303 aa10.65□□□□□ -0.7
CHFR-219ENST00000541341 ATOH1Q92858 354 aaPredicted RBP10.65□□□□□ -0.7
CHFR-219ENST00000541341 KAT5Q92993 513 aa10.65□□□□□ -0.7
CHFR-219ENST00000541341 ASIC4Q96FT7 647 aa10.65□□□□□ -0.7
CHFR-219ENST00000541341 ZNF558Q96NG5 402 aa10.65□□□□□ -0.7
CHFR-219ENST00000541341 FAM111AQ96PZ2 611 aa10.65□□□□□ -0.7
CHFR-219ENST00000541341 FDXACB1Q9BRP7 624 aaPredicted RBP10.65□□□□□ -0.7
CHFR-219ENST00000541341 S1PR5Q9H228 398 aa10.65□□□□□ -0.7
CHFR-219ENST00000541341 FZD8Q9H461 694 aa10.65□□□□□ -0.7
CHFR-219ENST00000541341 POMKQ9H5K3 350 aa10.65□□□□□ -0.7
CHFR-219ENST00000541341 C8orf4Q9NR00 106 aa10.65□□□□□ -0.7
CHFR-219ENST00000541341 IRAK4Q9NWZ3 460 aa10.65□□□□□ -0.7
CHFR-219ENST00000541341 EPS15L1Q9UBC2 864 aa10.65□□□□□ -0.7
CHFR-219ENST00000541341 TEX264Q9Y6I9 313 aa10.65□□□□□ -0.7
CHFR-219ENST00000541341 VPS13AQ96RL7 3174 aa10.65□□□□□ -0.7
CHFR-219ENST00000541341 DMDP11532 3685 aa10.64□□□□□ -0.71
CHFR-219ENST00000541341 DOCK6Q96HP0 2047 aa10.64□□□□□ -0.71
CHFR-219ENST00000541341 TTC36A6NLP5 189 aa10.64□□□□□ -0.71
CHFR-219ENST00000541341 TTLL13PA6NNM8 815 aa10.64□□□□□ -0.71
CHFR-219ENST00000541341 C2CD4DB7Z1M9 353 aa10.64□□□□□ -0.71
CHFR-219ENST00000541341 PFDN1O60925 122 aa10.64□□□□□ -0.71
CHFR-219ENST00000541341 SNNO75324 88 aaPredicted RBP10.64□□□□□ -0.71
CHFR-219ENST00000541341 CLPTM1O96005 669 aa10.64□□□□□ -0.71
CHFR-219ENST00000541341 ASLP04424 464 aa10.64□□□□□ -0.71
CHFR-219ENST00000541341 APOA4P06727 396 aa10.64□□□□□ -0.71
CHFR-219ENST00000541341 ENO1P06733 434 aaKnown RBP10.64□□□□□ -0.71
CHFR-219ENST00000541341 BPGMP07738 259 aa10.64□□□□□ -0.71
CHFR-219ENST00000541341 SRGAP2BP0DMP2 458 aa10.64□□□□□ -0.71
CHFR-219ENST00000541341 THRAP10827 490 aa10.64□□□□□ -0.71
CHFR-219ENST00000541341 MLNP12872 115 aa10.64□□□□□ -0.71
CHFR-219ENST00000541341 DARSP14868 501 aaKnown RBP10.64□□□□□ -0.71
CHFR-219ENST00000541341 VAV1P15498 845 aa10.64□□□□□ -0.71
CHFR-219ENST00000541341 ACO1P21399 889 aaKnown RBP10.64□□□□□ -0.71
CHFR-219ENST00000541341 PROZP22891 400 aa10.64□□□□□ -0.71
CHFR-219ENST00000541341 CDC25CP30307 473 aa10.64□□□□□ -0.71
CHFR-219ENST00000541341 TTKP33981 857 aa10.64□□□□□ -0.71
CHFR-219ENST00000541341 RPL22P35268 128 aaKnown RBP10.64□□□□□ -0.71
CHFR-219ENST00000541341 HADHAP40939 763 aa10.64□□□□□ -0.71
CHFR-219ENST00000541341 GABRB2P47870 512 aa10.64□□□□□ -0.71
CHFR-219ENST00000541341 PTPN5P54829 565 aa10.64□□□□□ -0.71
CHFR-219ENST00000541341 EIF3EP60228 445 aaKnown RBP10.64□□□□□ -0.71
CHFR-219ENST00000541341 FAM189BP81408 668 aa10.64□□□□□ -0.71
CHFR-219ENST00000541341 OTUD4Q01804 1114 aaKnown RBP10.64□□□□□ -0.71
CHFR-219ENST00000541341 MBTD1Q05BQ5 628 aa10.64□□□□□ -0.71
CHFR-219ENST00000541341 BTKQ06187 659 aa10.64□□□□□ -0.71
CHFR-219ENST00000541341 STILQ15468 1287 aa10.64□□□□□ -0.71
CHFR-219ENST00000541341 CCDC153Q494R4 210 aa10.64□□□□□ -0.71
CHFR-219ENST00000541341 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.64□□□□□ -0.71
CHFR-219ENST00000541341 PABPC1LQ4VXU2 614 aaKnown RBP10.64□□□□□ -0.71
CHFR-219ENST00000541341 UBAP2Q5T6F2 1119 aaKnown RBP10.64□□□□□ -0.71
CHFR-219ENST00000541341 C1orf228Q6PIY5 440 aa10.64□□□□□ -0.71
CHFR-219ENST00000541341 TMEM270Q6UE05 265 aa10.64□□□□□ -0.71
CHFR-219ENST00000541341 TAS1R3Q7RTX0 852 aa10.64□□□□□ -0.71
CHFR-219ENST00000541341 BMP8AQ7Z5Y6 402 aa10.64□□□□□ -0.71
CHFR-219ENST00000541341 WDR49Q8IV35 697 aa10.64□□□□□ -0.71
CHFR-219ENST00000541341 ZBTB8OSQ8IWT0 167 aa10.64□□□□□ -0.71
CHFR-219ENST00000541341 PIAS4Q8N2W9 510 aaPredicted RBP10.64□□□□□ -0.71
CHFR-219ENST00000541341 SLC4A11Q8NBS3 891 aa10.64□□□□□ -0.71
CHFR-219ENST00000541341 KCTD6Q8NC69 237 aa10.64□□□□□ -0.71
CHFR-219ENST00000541341 KREMEN2Q8NCW0 462 aa10.64□□□□□ -0.71
CHFR-219ENST00000541341 CMASQ8NFW8 434 aaPredicted RBP10.64□□□□□ -0.71
CHFR-219ENST00000541341 ACTL9Q8TC94 416 aa10.64□□□□□ -0.71
CHFR-219ENST00000541341 PLEKHO2Q8TD55 490 aa10.64□□□□□ -0.71
CHFR-219ENST00000541341 DTX3LQ8TDB6 740 aa10.64□□□□□ -0.71
CHFR-219ENST00000541341 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.64□□□□□ -0.71
CHFR-219ENST00000541341 SPOCK2Q92563 424 aa10.64□□□□□ -0.71
CHFR-219ENST00000541341 RTP4Q96DX8 246 aa10.64□□□□□ -0.71
CHFR-219ENST00000541341 ACAP3Q96P50 834 aa10.64□□□□□ -0.71
CHFR-219ENST00000541341 TBCBQ99426 244 aa10.64□□□□□ -0.71
CHFR-219ENST00000541341 TTC1Q99614 292 aa10.64□□□□□ -0.71
CHFR-219ENST00000541341 RTKNQ9BST9 563 aa10.64□□□□□ -0.71
CHFR-219ENST00000541341 INO80BQ9C086 356 aaPredicted RBP10.64□□□□□ -0.71
CHFR-219ENST00000541341 NMUR2Q9GZQ4 415 aa10.64□□□□□ -0.71
CHFR-219ENST00000541341 KCNH6Q9H252 994 aa10.64□□□□□ -0.71
CHFR-219ENST00000541341 SLC7A8Q9UHI5 535 aa10.64□□□□□ -0.71
CHFR-219ENST00000541341 AGO2Q9UKV8 859 aaKnown RBP10.64□□□□□ -0.71
CHFR-219ENST00000541341 KIAA1257Q9ULG3 409 aa10.64□□□□□ -0.71
CHFR-219ENST00000541341 PSMD13Q9UNM6 376 aa10.64□□□□□ -0.71
CHFR-219ENST00000541341 INPP5FQ9Y2H2 1132 aa10.64□□□□□ -0.71
CHFR-219ENST00000541341 HCFC2Q9Y5Z7 792 aa10.64□□□□□ -0.71
CHFR-219ENST00000541341 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.63□□□□□ -0.71
CHFR-219ENST00000541341 TCRBV9S1A1TA0A576 114 aa10.63□□□□□ -0.71
CHFR-219ENST00000541341 WDR91A4D1P6 747 aa10.63□□□□□ -0.71
CHFR-219ENST00000541341 GOLGA8IPA6NC78 632 aa10.63□□□□□ -0.71
CHFR-219ENST00000541341 LRRIQ4A6NIV6 560 aa10.63□□□□□ -0.71
CHFR-219ENST00000541341 SDR42E2A6NKP2 422 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms