RNA–Protein interactions for RNA: ENST00000538475.5

USP28-207, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 1,081 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-207ENST00000538475 CYP2J2P51589 502 aa6.85□□□□□ -1.31
USP28-207ENST00000538475 EPHB1P54762 984 aa6.85□□□□□ -1.31
USP28-207ENST00000538475 ALDH18A1P54886 795 aaKnown RBP6.85□□□□□ -1.31
USP28-207ENST00000538475 SLC25A3Q00325 362 aa6.85□□□□□ -1.31
USP28-207ENST00000538475 PCDH1Q08174 1060 aa6.85□□□□□ -1.31
USP28-207ENST00000538475 KCNA1Q09470 495 aa6.85□□□□□ -1.31
USP28-207ENST00000538475 MAMLD1Q13495 774 aa6.85□□□□□ -1.31
USP28-207ENST00000538475 FLOT2Q14254 428 aa6.85□□□□□ -1.31
USP28-207ENST00000538475 FASTKD3Q14CZ7 662 aaKnown RBP6.85□□□□□ -1.31
USP28-207ENST00000538475 ACAP1Q15027 740 aa6.85□□□□□ -1.31
USP28-207ENST00000538475 CHI3L2Q15782 390 aa6.85□□□□□ -1.31
USP28-207ENST00000538475 ARL13BQ3SXY8 428 aa6.85□□□□□ -1.31
USP28-207ENST00000538475 HP1BP3Q5SSJ5 553 aaPredicted RBP6.85□□□□□ -1.31
USP28-207ENST00000538475 ANKRD34AQ69YU3 496 aa6.85□□□□□ -1.31
USP28-207ENST00000538475 KRT80Q6KB66 452 aa6.85□□□□□ -1.31
USP28-207ENST00000538475 KIAA1841Q6NSI8 718 aa6.85□□□□□ -1.31
USP28-207ENST00000538475 C16orf87Q6PH81 154 aa6.85□□□□□ -1.31
USP28-207ENST00000538475 SLC2A7Q6PXP3 512 aa6.85□□□□□ -1.31
USP28-207ENST00000538475 BNC2Q6ZN30 1099 aaPredicted RBP6.85□□□□□ -1.31
USP28-207ENST00000538475 EEPD1Q7L9B9 569 aa6.85□□□□□ -1.31
USP28-207ENST00000538475 NANOGNBQ7Z5D8 188 aa6.85□□□□□ -1.31
USP28-207ENST00000538475 PRUNE1Q86TP1 453 aa6.85□□□□□ -1.31
USP28-207ENST00000538475 SLC47A2Q86VL8 602 aa6.85□□□□□ -1.31
USP28-207ENST00000538475 TTC30AQ86WT1 665 aa6.85□□□□□ -1.31
USP28-207ENST00000538475 RHPN2Q8IUC4 686 aa6.85□□□□□ -1.31
USP28-207ENST00000538475 ADGRF4Q8IZF3 695 aa6.85□□□□□ -1.31
USP28-207ENST00000538475 UNC5BQ8IZJ1 945 aa6.85□□□□□ -1.31
USP28-207ENST00000538475 PGAM4Q8N0Y7 254 aa6.85□□□□□ -1.31
USP28-207ENST00000538475 SDR16C5Q8N3Y7 309 aa6.85□□□□□ -1.31
USP28-207ENST00000538475 CPSF7Q8N684 471 aaKnown RBP6.85□□□□□ -1.31
USP28-207ENST00000538475 CNTD1Q8N815 330 aa6.85□□□□□ -1.31
USP28-207ENST00000538475 MFSD2AQ8NA29 543 aa6.85□□□□□ -1.31
USP28-207ENST00000538475 MCUQ8NE86 351 aa6.85□□□□□ -1.31
USP28-207ENST00000538475 FBXO36Q8NEA4 188 aa6.85□□□□□ -1.31
USP28-207ENST00000538475 FBXL13Q8NEE6 735 aa6.85□□□□□ -1.31
USP28-207ENST00000538475 FBXO27Q8NI29 283 aa6.85□□□□□ -1.31
USP28-207ENST00000538475 FEZF2Q8TBJ5 459 aa6.85□□□□□ -1.31
USP28-207ENST00000538475 DCAF4Q8WV16 495 aa6.85□□□□□ -1.31
USP28-207ENST00000538475 S100ZQ8WXG8 99 aa6.85□□□□□ -1.31
USP28-207ENST00000538475 CPT1BQ92523 772 aa6.85□□□□□ -1.31
USP28-207ENST00000538475 ISOC1Q96CN7 298 aa6.85□□□□□ -1.31
USP28-207ENST00000538475 MAGED4Q96JG8 741 aa6.85□□□□□ -1.31
USP28-207ENST00000538475 SERAC1Q96JX3 654 aa6.85□□□□□ -1.31
USP28-207ENST00000538475 CNBD2Q96M20 576 aa6.85□□□□□ -1.31
USP28-207ENST00000538475 PWWP2AQ96N64 755 aa6.85□□□□□ -1.31
USP28-207ENST00000538475 CSRNP1Q96S65 589 aa6.85□□□□□ -1.31
USP28-207ENST00000538475 TCF12Q99081 682 aa6.85□□□□□ -1.31
USP28-207ENST00000538475 HERPUD2Q9BSE4 406 aa6.85□□□□□ -1.31
USP28-207ENST00000538475 KRTAP4-8Q9BYQ9 185 aa6.85□□□□□ -1.31
USP28-207ENST00000538475 ZNF518BQ9C0D4 1074 aa6.85□□□□□ -1.31
USP28-207ENST00000538475 NACA2Q9H009 215 aa6.85□□□□□ -1.31
USP28-207ENST00000538475 PAIP1Q9H074 479 aaKnown RBP6.85□□□□□ -1.31
USP28-207ENST00000538475 TMEM117Q9H0C3 514 aa6.85□□□□□ -1.31
USP28-207ENST00000538475 EHMT1Q9H9B1 1298 aa6.85□□□□□ -1.31
USP28-207ENST00000538475 VAT1LQ9HCJ6 419 aa6.85□□□□□ -1.31
USP28-207ENST00000538475 SLC38A7Q9NVC3 462 aa6.85□□□□□ -1.31
USP28-207ENST00000538475 RIC8BQ9NVN3 520 aa6.85□□□□□ -1.31
USP28-207ENST00000538475 SATB2Q9UPW6 733 aa6.85□□□□□ -1.31
USP28-207ENST00000538475 ERVK-11Q9UQG0 969 aa6.85□□□□□ -1.31
USP28-207ENST00000538475 RAXQ9Y2V3 346 aa6.85□□□□□ -1.31
USP28-207ENST00000538475 SIP14410 1827 aa6.85□□□□□ -1.31
USP28-207ENST00000538475 DICER1Q9UPY3 1922 aaKnown RBP6.84□□□□□ -1.31
USP28-207ENST00000538475 DOCK5Q9H7D0 1870 aa6.84□□□□□ -1.31
USP28-207ENST00000538475 TCRBV9S1A1TA0A576 114 aa6.84□□□□□ -1.31
USP28-207ENST00000538475 TRIM49D1C9J1S8 452 aa6.84□□□□□ -1.31
USP28-207ENST00000538475 M0QX08 132 aa6.84□□□□□ -1.31
USP28-207ENST00000538475 SGK1O00141 431 aa6.84□□□□□ -1.31
USP28-207ENST00000538475 RGS13O14921 159 aa6.84□□□□□ -1.31
USP28-207ENST00000538475 MAGEB3O15480 346 aa6.84□□□□□ -1.31
USP28-207ENST00000538475 RFPL1O75677 317 aa6.84□□□□□ -1.31
USP28-207ENST00000538475 ZBTB11O95625 1053 aaPredicted RBP6.84□□□□□ -1.31
USP28-207ENST00000538475 LSM8O95777 96 aaKnown RBP6.84□□□□□ -1.31
USP28-207ENST00000538475 RALBP11234 206 aa6.84□□□□□ -1.31
USP28-207ENST00000538475 PABPC1P11940 636 aaKnown RBP6.84□□□□□ -1.31
USP28-207ENST00000538475 JUNBP17275 347 aaPredicted RBP6.84□□□□□ -1.31
USP28-207ENST00000538475 JAK1P23458 1154 aa6.84□□□□□ -1.31
USP28-207ENST00000538475 DNAJB1P25685 340 aa6.84□□□□□ -1.31
USP28-207ENST00000538475 GSSP48637 474 aa6.84□□□□□ -1.31
USP28-207ENST00000538475 PCYT1AP49585 367 aa6.84□□□□□ -1.31
USP28-207ENST00000538475 EIF2B2P49770 351 aaKnown RBP6.84□□□□□ -1.31
USP28-207ENST00000538475 PSMC6P62333 389 aa6.84□□□□□ -1.31
USP28-207ENST00000538475 GTF2BQ00403 316 aa6.84□□□□□ -1.31
USP28-207ENST00000538475 PPP3CAQ08209 521 aa6.84□□□□□ -1.31
USP28-207ENST00000538475 ZNF846Q147U1 533 aa6.84□□□□□ -1.31
USP28-207ENST00000538475 PSMD6Q15008 389 aa6.84□□□□□ -1.31
USP28-207ENST00000538475 SNX17Q15036 470 aa6.84□□□□□ -1.31
USP28-207ENST00000538475 DGKDQ16760 1214 aa6.84□□□□□ -1.31
USP28-207ENST00000538475 LRRC36Q1X8D7 754 aa6.84□□□□□ -1.31
USP28-207ENST00000538475 CCDC14Q49A88 953 aa6.84□□□□□ -1.31
USP28-207ENST00000538475 PIGGQ5H8A4 983 aa6.84□□□□□ -1.31
USP28-207ENST00000538475 ODR4Q5SWX8 454 aa6.84□□□□□ -1.31
USP28-207ENST00000538475 C1orf220Q5T0J3 134 aa6.84□□□□□ -1.31
USP28-207ENST00000538475 AGAP7PQ5VUJ5 663 aa6.84□□□□□ -1.31
USP28-207ENST00000538475 PDPK2PQ6A1A2 396 aa6.84□□□□□ -1.31
USP28-207ENST00000538475 SCARA3Q6AZY7 606 aa6.84□□□□□ -1.31
USP28-207ENST00000538475 SPOPLQ6IQ16 392 aa6.84□□□□□ -1.31
USP28-207ENST00000538475 ZNF746Q6NUN9 644 aaPredicted RBP6.84□□□□□ -1.31
USP28-207ENST00000538475 PPP4R4Q6NUP7 873 aa6.84□□□□□ -1.31
USP28-207ENST00000538475 IYDQ6PHW0 289 aa6.84□□□□□ -1.31
USP28-207ENST00000538475 RFX8Q6ZV50 586 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms