RNA–Protein interactions for RNA: ENST00000538239.5

LRP6-203, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best)

Gene LRP6, Length 7,812 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-203ENST00000538239 CHST9Q7L1S5 443 aa5.46□□□□□ -1.54
LRP6-203ENST00000538239 IFNLR1Q8IU57 520 aaPredicted RBP5.46□□□□□ -1.54
LRP6-203ENST00000538239 ZNF473Q8WTR7 871 aaKnown RBP5.46□□□□□ -1.54
LRP6-203ENST00000538239 CLIP3Q96DZ5 547 aa5.46□□□□□ -1.54
LRP6-203ENST00000538239 CMTM5Q96DZ9 223 aa5.46□□□□□ -1.54
LRP6-203ENST00000538239 PDLIM2Q96JY6 352 aa5.46□□□□□ -1.54
LRP6-203ENST00000538239 HSD17B14Q9BPX1 270 aa5.46□□□□□ -1.54
LRP6-203ENST00000538239 LACRTQ9GZZ8 138 aa5.46□□□□□ -1.54
LRP6-203ENST00000538239 CDHR5Q9HBB8 845 aa5.46□□□□□ -1.54
LRP6-203ENST00000538239 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP5.46□□□□□ -1.54
LRP6-203ENST00000538239 KIAA1522Q9P206 1035 aaPredicted RBP5.46□□□□□ -1.54
LRP6-203ENST00000538239 GULP1Q9UBP9 304 aa5.46□□□□□ -1.54
LRP6-203ENST00000538239 SRRDQ9UH36 339 aa5.46□□□□□ -1.54
LRP6-203ENST00000538239 GTF2A1LQ9UNN4 478 aa5.46□□□□□ -1.54
LRP6-203ENST00000538239 PCDHA3Q9Y5H8 950 aa5.46□□□□□ -1.54
LRP6-203ENST00000538239 C1orf232A0A0U1RR37 186 aa5.45□□□□□ -1.54
LRP6-203ENST00000538239 ARVCFO00192 962 aa5.45□□□□□ -1.54
LRP6-203ENST00000538239 TBC1D4O60343 1298 aa5.45□□□□□ -1.54
LRP6-203ENST00000538239 PCCBP05166 539 aa5.45□□□□□ -1.54
LRP6-203ENST00000538239 HTR1BP28222 390 aa5.45□□□□□ -1.54
LRP6-203ENST00000538239 ZNF143P52747 638 aaPredicted RBP5.45□□□□□ -1.54
LRP6-203ENST00000538239 LBX1P52954 281 aa5.45□□□□□ -1.54
LRP6-203ENST00000538239 DAB2P98082 770 aa5.45□□□□□ -1.54
LRP6-203ENST00000538239 CRTC3Q6UUV7 619 aa5.45□□□□□ -1.54
LRP6-203ENST00000538239 TNS4Q8IZW8 715 aa5.45□□□□□ -1.54
LRP6-203ENST00000538239 FBXO39Q8N4B4 442 aa5.45□□□□□ -1.54
LRP6-203ENST00000538239 DBF4BQ8NFT6 615 aa5.45□□□□□ -1.54
LRP6-203ENST00000538239 NPLOC4Q8TAT6 608 aa5.45□□□□□ -1.54
LRP6-203ENST00000538239 PAWRQ96IZ0 340 aaKnown RBP5.45□□□□□ -1.54
LRP6-203ENST00000538239 HSFY1Q96LI6 401 aa5.45□□□□□ -1.54
LRP6-203ENST00000538239 NDEL1Q9GZM8 345 aa5.45□□□□□ -1.54
LRP6-203ENST00000538239 GRM6O15303 877 aa5.45□□□□□ -1.54
LRP6-203ENST00000538239 DAB1O75553 588 aa5.45□□□□□ -1.54
LRP6-203ENST00000538239 ERBB2P04626 1255 aa5.45□□□□□ -1.54
LRP6-203ENST00000538239 PBX3P40426 434 aa5.45□□□□□ -1.54
LRP6-203ENST00000538239 ACAP1Q15027 740 aa5.45□□□□□ -1.54
LRP6-203ENST00000538239 TMEM63BQ5T3F8 832 aa5.45□□□□□ -1.54
LRP6-203ENST00000538239 SETD3Q86TU7 594 aaPredicted RBP5.45□□□□□ -1.54
LRP6-203ENST00000538239 OR52K1Q8NGK4 314 aa5.45□□□□□ -1.54
LRP6-203ENST00000538239 ERP27Q96DN0 273 aa5.45□□□□□ -1.54
LRP6-203ENST00000538239 B3GALT6Q96L58 329 aa5.45□□□□□ -1.54
LRP6-203ENST00000538239 EPN3Q9H201 632 aa5.45□□□□□ -1.54
LRP6-203ENST00000538239 EXO5Q9H790 373 aa5.45□□□□□ -1.54
LRP6-203ENST00000538239 RNF186Q9NXI6 227 aa5.45□□□□□ -1.54
LRP6-203ENST00000538239 USP15Q9Y4E8 981 aaPredicted RBP5.45□□□□□ -1.54
LRP6-203ENST00000538239 MYO1CO00159 1063 aa5.45□□□□□ -1.54
LRP6-203ENST00000538239 WNT7AO00755 349 aa5.45□□□□□ -1.54
LRP6-203ENST00000538239 ZSCAN5DPP0CG00 497 aa5.45□□□□□ -1.54
LRP6-203ENST00000538239 PAX3P23760 479 aa5.45□□□□□ -1.54
LRP6-203ENST00000538239 CYP4F8P98187 520 aa5.45□□□□□ -1.54
LRP6-203ENST00000538239 MBTD1Q05BQ5 628 aa5.45□□□□□ -1.54
LRP6-203ENST00000538239 HSPA14Q0VDF9 509 aa5.45□□□□□ -1.54
LRP6-203ENST00000538239 GDF6Q6KF10 455 aaPredicted RBP5.45□□□□□ -1.54
LRP6-203ENST00000538239 NLRP9Q7RTR0 991 aa5.45□□□□□ -1.54
LRP6-203ENST00000538239 SLC41A1Q8IVJ1 513 aa5.45□□□□□ -1.54
LRP6-203ENST00000538239 SLC22A9Q8IVM8 553 aa5.45□□□□□ -1.54
LRP6-203ENST00000538239 STX19Q8N4C7 294 aa5.45□□□□□ -1.54
LRP6-203ENST00000538239 EPS8L1Q8TE68 723 aa5.45□□□□□ -1.54
LRP6-203ENST00000538239 AUTS2Q8WXX7 1259 aa5.45□□□□□ -1.54
LRP6-203ENST00000538239 NAT9Q9BTE0 207 aa5.45□□□□□ -1.54
LRP6-203ENST00000538239 PRKD2Q9BZL6 878 aa5.45□□□□□ -1.54
LRP6-203ENST00000538239 KRCC1Q9NPI7 259 aaPredicted RBP5.45□□□□□ -1.54
LRP6-203ENST00000538239 ETNK2Q9NVF9 386 aa5.45□□□□□ -1.54
LRP6-203ENST00000538239 MTPAPQ9NVV4 582 aaKnown RBP eCLIP5.45□□□□□ -1.54
LRP6-203ENST00000538239 AHSPQ9NZD4 102 aa5.45□□□□□ -1.54
LRP6-203ENST00000538239 VPS51Q9UID3 782 aa5.45□□□□□ -1.54
LRP6-203ENST00000538239 MAFBQ9Y5Q3 323 aaPredicted RBP5.45□□□□□ -1.54
LRP6-203ENST00000538239 ROBO3Q96MS0 1386 aa5.45□□□□□ -1.54
LRP6-203ENST00000538239 UBXN8O00124 270 aa5.45□□□□□ -1.54
LRP6-203ENST00000538239 PAGE1O75459 146 aa5.45□□□□□ -1.54
LRP6-203ENST00000538239 RARAP10276 462 aa5.45□□□□□ -1.54
LRP6-203ENST00000538239 PTPN2P17706 415 aa5.45□□□□□ -1.54
LRP6-203ENST00000538239 GTF2E2P29084 291 aaKnown RBP5.45□□□□□ -1.54
LRP6-203ENST00000538239 ABCG1P45844 678 aa5.45□□□□□ -1.54
LRP6-203ENST00000538239 RAD23BP54727 409 aa5.45□□□□□ -1.54
LRP6-203ENST00000538239 CYTH1Q15438 398 aa5.45□□□□□ -1.54
LRP6-203ENST00000538239 ATP6AP1LQ52LC2 224 aa5.45□□□□□ -1.54
LRP6-203ENST00000538239 PDPK2PQ6A1A2 396 aa5.45□□□□□ -1.54
LRP6-203ENST00000538239 LRP10Q7Z4F1 713 aa5.45□□□□□ -1.54
LRP6-203ENST00000538239 CTU1Q7Z7A3 348 aaKnown RBP5.45□□□□□ -1.54
LRP6-203ENST00000538239 SLC26A11Q86WA9 606 aa5.45□□□□□ -1.54
LRP6-203ENST00000538239 LRRC52Q8N7C0 313 aa5.45□□□□□ -1.54
LRP6-203ENST00000538239 MAGEC3Q8TD91 643 aa5.45□□□□□ -1.54
LRP6-203ENST00000538239 DIS3LQ8TF46 1054 aaKnown RBP5.45□□□□□ -1.54
LRP6-203ENST00000538239 MTMR8Q96EF0 704 aa5.45□□□□□ -1.54
LRP6-203ENST00000538239 BBS4Q96RK4 519 aa5.45□□□□□ -1.54
LRP6-203ENST00000538239 SEMA3CQ99985 751 aa5.45□□□□□ -1.54
LRP6-203ENST00000538239 B3GNT5Q9BYG0 378 aa5.45□□□□□ -1.54
LRP6-203ENST00000538239 CAAP1Q9H8G2 361 aa5.45□□□□□ -1.54
LRP6-203ENST00000538239 ARL15Q9NXU5 204 aa5.45□□□□□ -1.54
LRP6-203ENST00000538239 GNPTGQ9UJJ9 305 aa5.45□□□□□ -1.54
LRP6-203ENST00000538239 CHD2O14647 1828 aaKnown RBP5.45□□□□□ -1.54
LRP6-203ENST00000538239 CPA3P15088 417 aa5.45□□□□□ -1.54
LRP6-203ENST00000538239 BGNP21810 368 aa5.45□□□□□ -1.54
LRP6-203ENST00000538239 CNTFP26441 200 aa5.45□□□□□ -1.54
LRP6-203ENST00000538239 SLC5A3P53794 718 aa5.45□□□□□ -1.54
LRP6-203ENST00000538239 ERVK-21P61565 698 aa5.45□□□□□ -1.54
LRP6-203ENST00000538239 HTRA3P83110 453 aa5.45□□□□□ -1.54
LRP6-203ENST00000538239 ABRQ12979 859 aa5.45□□□□□ -1.54
LRP6-203ENST00000538239 NFYCQ13952 458 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms