RNA–Protein interactions for RNA: ENST00000537429.5

HMGA2-208, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,527 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-208ENST00000537429 GGA2Q9UJY4 613 aa24.84■■□□□ 1.57
HMGA2-208ENST00000537429 INTS6Q9UL03 887 aaKnown RBP24.84■■□□□ 1.57
HMGA2-208ENST00000537429 RAD54BQ9Y620 910 aa24.84■■□□□ 1.57
HMGA2-208ENST00000537429 PIAS3Q9Y6X2 628 aa24.84■■□□□ 1.57
HMGA2-208ENST00000537429 PALM2-AKAP2B1ALY0 433 aaPredicted RBP24.83■■□□□ 1.57
HMGA2-208ENST00000537429 URI1O94763 535 aaPredicted RBP24.83■■□□□ 1.57
HMGA2-208ENST00000537429 PABPC1P11940 636 aaKnown RBP24.83■■□□□ 1.57
HMGA2-208ENST00000537429 ACVRL1P37023 503 aa24.83■■□□□ 1.57
HMGA2-208ENST00000537429 ETFBP38117 255 aa24.83■■□□□ 1.57
HMGA2-208ENST00000537429 SIX1Q15475 284 aaPredicted RBP24.83■■□□□ 1.57
HMGA2-208ENST00000537429 SLC44A4Q53GD3 710 aa24.83■■□□□ 1.57
HMGA2-208ENST00000537429 GRAMD4Q6IC98 578 aa24.83■■□□□ 1.57
HMGA2-208ENST00000537429 BZW1Q7L1Q6 419 aaKnown RBP24.83■■□□□ 1.57
HMGA2-208ENST00000537429 TTC13Q8NBP0 860 aa24.83■■□□□ 1.57
HMGA2-208ENST00000537429 MAIP1Q8WWC4 291 aa24.83■■□□□ 1.57
HMGA2-208ENST00000537429 HAUS1Q96CS2 278 aa24.83■■□□□ 1.57
HMGA2-208ENST00000537429 HMCESQ96FZ2 354 aa24.83■■□□□ 1.57
HMGA2-208ENST00000537429 CAPZA3Q96KX2 299 aa24.83■■□□□ 1.57
HMGA2-208ENST00000537429 PNKPQ96T60 521 aa24.83■■□□□ 1.57
HMGA2-208ENST00000537429 NAP1L3Q99457 506 aaPredicted RBP24.83■■□□□ 1.57
HMGA2-208ENST00000537429 ACE2Q9BYF1 805 aaPredicted RBP24.83■■□□□ 1.57
HMGA2-208ENST00000537429 SMARCAL1Q9NZC9 954 aa24.83■■□□□ 1.57
HMGA2-208ENST00000537429 MUTYHQ9UIF7 546 aa24.83■■□□□ 1.57
HMGA2-208ENST00000537429 MIA3Q5JRA6 1907 aa24.83■■□□□ 1.57
HMGA2-208ENST00000537429 PAPOLAP51003 745 aaKnown RBP24.82■■□□□ 1.56
HMGA2-208ENST00000537429 GALNT2Q10471 571 aa24.82■■□□□ 1.56
HMGA2-208ENST00000537429 GEN1Q17RS7 908 aa24.82■■□□□ 1.56
HMGA2-208ENST00000537429 PLEKHG6Q3KR16 790 aa24.82■■□□□ 1.56
HMGA2-208ENST00000537429 TXNDC11Q6PKC3 985 aa24.82■■□□□ 1.56
HMGA2-208ENST00000537429 APCDD1Q8J025 514 aa24.82■■□□□ 1.56
HMGA2-208ENST00000537429 ACTL9Q8TC94 416 aa24.82■■□□□ 1.56
HMGA2-208ENST00000537429 MSANTD3Q96H12 275 aa24.82■■□□□ 1.56
HMGA2-208ENST00000537429 OLFM3Q96PB7 478 aa24.82■■□□□ 1.56
HMGA2-208ENST00000537429 UHRF1Q96T88 793 aaPredicted RBP24.82■■□□□ 1.56
HMGA2-208ENST00000537429 FBXL21Q9UKT6 434 aa24.82■■□□□ 1.56
HMGA2-208ENST00000537429 ARHGAP42A6NI28 874 aa24.81■■□□□ 1.56
HMGA2-208ENST00000537429 DFFAO00273 331 aa24.81■■□□□ 1.56
HMGA2-208ENST00000537429 GALK1P51570 392 aa24.81■■□□□ 1.56
HMGA2-208ENST00000537429 OTUD4Q01804 1114 aaKnown RBP24.81■■□□□ 1.56
HMGA2-208ENST00000537429 SERINC3Q13530 473 aa24.81■■□□□ 1.56
HMGA2-208ENST00000537429 DMC1Q14565 340 aa24.81■■□□□ 1.56
HMGA2-208ENST00000537429 NOMO1Q15155 1222 aa24.81■■□□□ 1.56
HMGA2-208ENST00000537429 PREPLQ4J6C6 727 aaPredicted RBP24.81■■□□□ 1.56
HMGA2-208ENST00000537429 UBALD2Q8IYN6 164 aa24.81■■□□□ 1.56
HMGA2-208ENST00000537429 AHI1Q8N157 1196 aa24.81■■□□□ 1.56
HMGA2-208ENST00000537429 CCDC33Q8N5R6 958 aa24.81■■□□□ 1.56
HMGA2-208ENST00000537429 TERB1Q8NA31 727 aa24.81■■□□□ 1.56
HMGA2-208ENST00000537429 FBRSL1Q9HCM7 1045 aaKnown RBP24.81■■□□□ 1.56
HMGA2-208ENST00000537429 CDC23Q9UJX2 597 aa24.81■■□□□ 1.56
HMGA2-208ENST00000537429 R3HDM2Q9Y2K5 976 aaKnown RBP24.81■■□□□ 1.56
HMGA2-208ENST00000537429 NCAM2O15394 837 aa24.81■■□□□ 1.56
HMGA2-208ENST00000537429 MX2P20592 715 aa24.81■■□□□ 1.56
HMGA2-208ENST00000537429 GARSP41250 739 aaKnown RBP24.81■■□□□ 1.56
HMGA2-208ENST00000537429 FUT11Q495W5 492 aa24.81■■□□□ 1.56
HMGA2-208ENST00000537429 PITRM1Q5JRX3 1037 aa24.81■■□□□ 1.56
HMGA2-208ENST00000537429 TMEM215Q68D42 235 aa24.81■■□□□ 1.56
HMGA2-208ENST00000537429 IL31Q6EBC2 164 aa24.81■■□□□ 1.56
HMGA2-208ENST00000537429 ADIPOR2Q86V24 386 aa24.81■■□□□ 1.56
HMGA2-208ENST00000537429 LRRC49Q8IUZ0 686 aa24.81■■□□□ 1.56
HMGA2-208ENST00000537429 WFIKKN2Q8TEU8 576 aa24.81■■□□□ 1.56
HMGA2-208ENST00000537429 P2RY13Q9BPV8 354 aa24.81■■□□□ 1.56
HMGA2-208ENST00000537429 SPON2Q9BUD6 331 aa24.81■■□□□ 1.56
HMGA2-208ENST00000537429 ATP13A1Q9HD20 1204 aa24.81■■□□□ 1.56
HMGA2-208ENST00000537429 WNT16Q9UBV4 365 aa24.81■■□□□ 1.56
HMGA2-208ENST00000537429 VPS28Q9UK41 221 aa24.81■■□□□ 1.56
HMGA2-208ENST00000537429 CA14Q9ULX7 337 aa24.81■■□□□ 1.56
HMGA2-208ENST00000537429 NYNRINQ9P2P1 1898 aaKnown RBP24.8■■□□□ 1.56
HMGA2-208ENST00000537429 A0A0A0MRY4 1105 aa24.8■■□□□ 1.56
HMGA2-208ENST00000537429 SHISA7A6NL88 538 aa24.8■■□□□ 1.56
HMGA2-208ENST00000537429 NUMBP49757 651 aa24.8■■□□□ 1.56
HMGA2-208ENST00000537429 KDSRQ06136 332 aa24.8■■□□□ 1.56
HMGA2-208ENST00000537429 PDK1Q15118 436 aa24.8■■□□□ 1.56
HMGA2-208ENST00000537429 SUGP1Q8IWZ8 645 aaKnown RBP24.8■■□□□ 1.56
HMGA2-208ENST00000537429 DCAF4L2Q8NA75 395 aa24.8■■□□□ 1.56
HMGA2-208ENST00000537429 HDAC11Q96DB2 347 aa24.8■■□□□ 1.56
HMGA2-208ENST00000537429 TRIOO75962 3097 aa24.79■■□□□ 1.56
HMGA2-208ENST00000537429 PDE2AO00408 941 aaPredicted RBP24.79■■□□□ 1.56
HMGA2-208ENST00000537429 KDELR3O43731 214 aa24.79■■□□□ 1.56
HMGA2-208ENST00000537429 MAFKO60675 156 aa24.79■■□□□ 1.56
HMGA2-208ENST00000537429 KAT7O95251 611 aa24.79■■□□□ 1.56
HMGA2-208ENST00000537429 PAFAH1B1P43034 410 aa24.79■■□□□ 1.56
HMGA2-208ENST00000537429 TUBB2AQ13885 445 aa24.79■■□□□ 1.56
HMGA2-208ENST00000537429 MLF2Q15773 248 aaPredicted RBP24.79■■□□□ 1.56
HMGA2-208ENST00000537429 ARHGAP36Q6ZRI8 547 aa24.79■■□□□ 1.56
HMGA2-208ENST00000537429 EXOC4Q96A65 974 aa24.79■■□□□ 1.56
HMGA2-208ENST00000537429 ACDQ96AP0 544 aa24.79■■□□□ 1.56
HMGA2-208ENST00000537429 FAM118BQ9BPY3 351 aa24.79■■□□□ 1.56
HMGA2-208ENST00000537429 TUBB2BQ9BVA1 445 aa24.79■■□□□ 1.56
HMGA2-208ENST00000537429 FRMD8P1Q9BZ68 369 aaPredicted RBP24.79■■□□□ 1.56
HMGA2-208ENST00000537429 PRRT4C9JH25 899 aa24.78■■□□□ 1.56
HMGA2-208ENST00000537429 ZMPSTE24O75844 475 aa24.78■■□□□ 1.56
HMGA2-208ENST00000537429 GLDCP23378 1020 aa24.78■■□□□ 1.56
HMGA2-208ENST00000537429 GRIA2P42262 883 aa24.78■■□□□ 1.56
HMGA2-208ENST00000537429 XRCC4Q13426 336 aa24.78■■□□□ 1.56
HMGA2-208ENST00000537429 MBLAC2Q68D91 279 aa24.78■■□□□ 1.56
HMGA2-208ENST00000537429 TPRG1Q6ZUI0 275 aa24.78■■□□□ 1.56
HMGA2-208ENST00000537429 ZNF354CQ86Y25 554 aa24.78■■□□□ 1.56
HMGA2-208ENST00000537429 ATPAF2Q8N5M1 289 aa24.78■■□□□ 1.56
HMGA2-208ENST00000537429 PRELID2Q8N945 189 aa24.78■■□□□ 1.56
HMGA2-208ENST00000537429 SLC35B2Q8TB61 432 aa24.78■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms