RNA–Protein interactions for RNA: ENST00000535607.5

USP28-202, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 683 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-202ENST00000535607 SYNPO2Q9UMS6 1093 aa6.82□□□□□ -1.32
USP28-202ENST00000535607 SORCS3Q9UPU3 1222 aa6.82□□□□□ -1.32
USP28-202ENST00000535607 CHKBQ9Y259 395 aa6.82□□□□□ -1.32
USP28-202ENST00000535607 WDR37Q9Y2I8 494 aa6.82□□□□□ -1.32
USP28-202ENST00000535607 CYP2D7A0A087X1C5 515 aa6.81□□□□□ -1.32
USP28-202ENST00000535607 TEX51A0A1B0GUA7 166 aa6.81□□□□□ -1.32
USP28-202ENST00000535607 SIGLEC16A6NMB1 481 aa6.81□□□□□ -1.32
USP28-202ENST00000535607 TMEM110-MUSTN1A8MSY1 372 aa6.81□□□□□ -1.32
USP28-202ENST00000535607 TCP10L2B9ZVM9 353 aa6.81□□□□□ -1.32
USP28-202ENST00000535607 SPECC1L-ADORA2AF8WAN1 911 aa6.81□□□□□ -1.32
USP28-202ENST00000535607 I3L4J1 428 aa6.81□□□□□ -1.32
USP28-202ENST00000535607 BIRC5O15392 142 aa6.81□□□□□ -1.32
USP28-202ENST00000535607 ZSCAN9O15535 394 aaPredicted RBP6.81□□□□□ -1.32
USP28-202ENST00000535607 NMT2O60551 498 aa6.81□□□□□ -1.32
USP28-202ENST00000535607 GCNT3O95395 438 aa6.81□□□□□ -1.32
USP28-202ENST00000535607 IL1BP01584 269 aa6.81□□□□□ -1.32
USP28-202ENST00000535607 FTLP02792 175 aaPredicted RBP6.81□□□□□ -1.32
USP28-202ENST00000535607 ENO2P09104 434 aaPredicted RBP6.81□□□□□ -1.32
USP28-202ENST00000535607 CYP11B2P19099 503 aa6.81□□□□□ -1.32
USP28-202ENST00000535607 COMTP21964 271 aa6.81□□□□□ -1.32
USP28-202ENST00000535607 CRABP2P29373 138 aa6.81□□□□□ -1.32
USP28-202ENST00000535607 STAT5AP42229 794 aa6.81□□□□□ -1.32
USP28-202ENST00000535607 MAGEA4P43358 317 aa6.81□□□□□ -1.32
USP28-202ENST00000535607 FMO5P49326 533 aa6.81□□□□□ -1.32
USP28-202ENST00000535607 FNTBP49356 437 aa6.81□□□□□ -1.32
USP28-202ENST00000535607 CDKN1CP49918 316 aaPredicted RBP6.81□□□□□ -1.32
USP28-202ENST00000535607 ITGA8P53708 1063 aa6.81□□□□□ -1.32
USP28-202ENST00000535607 CACNB3P54284 484 aa6.81□□□□□ -1.32
USP28-202ENST00000535607 ITKQ08881 620 aa6.81□□□□□ -1.32
USP28-202ENST00000535607 DNAJC3Q13217 504 aa6.81□□□□□ -1.32
USP28-202ENST00000535607 MTA1Q13330 715 aa6.81□□□□□ -1.32
USP28-202ENST00000535607 GIT2Q14161 759 aa6.81□□□□□ -1.32
USP28-202ENST00000535607 CTTNQ14247 550 aaKnown RBP6.81□□□□□ -1.32
USP28-202ENST00000535607 MESDQ14696 234 aa6.81□□□□□ -1.32
USP28-202ENST00000535607 CCNG2Q16589 344 aa6.81□□□□□ -1.32
USP28-202ENST00000535607 SLC4A8Q2Y0W8 1093 aa6.81□□□□□ -1.32
USP28-202ENST00000535607 KHDC1Q4VXA5 237 aaKnown RBP6.81□□□□□ -1.32
USP28-202ENST00000535607 CFAP157Q5JU67 520 aa6.81□□□□□ -1.32
USP28-202ENST00000535607 KRT39Q6A163 491 aa6.81□□□□□ -1.32
USP28-202ENST00000535607 TIGD7Q6NT04 549 aaPredicted RBP6.81□□□□□ -1.32
USP28-202ENST00000535607 TATDN1Q6P1N9 297 aa6.81□□□□□ -1.32
USP28-202ENST00000535607 RHBDF2Q6PJF5 856 aa6.81□□□□□ -1.32
USP28-202ENST00000535607 B3GNT6Q6ZMB0 384 aa6.81□□□□□ -1.32
USP28-202ENST00000535607 SEPT14Q6ZU15 432 aa6.81□□□□□ -1.32
USP28-202ENST00000535607 GSTA5Q7RTV2 222 aa6.81□□□□□ -1.32
USP28-202ENST00000535607 ANKS1BQ7Z6G8 1248 aa6.81□□□□□ -1.32
USP28-202ENST00000535607 SPATA24Q86W54 205 aa6.81□□□□□ -1.32
USP28-202ENST00000535607 MIB1Q86YT6 1006 aa6.81□□□□□ -1.32
USP28-202ENST00000535607 ZCCHC9Q8N567 271 aaKnown RBP6.81□□□□□ -1.32
USP28-202ENST00000535607 C7orf31Q8N865 590 aa6.81□□□□□ -1.32
USP28-202ENST00000535607 SLC17A8Q8NDX2 589 aa6.81□□□□□ -1.32
USP28-202ENST00000535607 CATSPER1Q8NEC5 780 aa6.81□□□□□ -1.32
USP28-202ENST00000535607 TTC8Q8TAM2 541 aa6.81□□□□□ -1.32
USP28-202ENST00000535607 LNX1Q8TBB1 728 aaPredicted RBP6.81□□□□□ -1.32
USP28-202ENST00000535607 LRRC15Q8TF66 581 aa6.81□□□□□ -1.32
USP28-202ENST00000535607 NAT14Q8WUY8 206 aa6.81□□□□□ -1.32
USP28-202ENST00000535607 RSPH1Q8WYR4 309 aa6.81□□□□□ -1.32
USP28-202ENST00000535607 KCNN1Q92952 543 aa6.81□□□□□ -1.32
USP28-202ENST00000535607 SLC35C1Q96A29 364 aa6.81□□□□□ -1.32
USP28-202ENST00000535607 AZIN2Q96A70 460 aa6.81□□□□□ -1.32
USP28-202ENST00000535607 DCPSQ96C86 337 aaKnown RBP6.81□□□□□ -1.32
USP28-202ENST00000535607 FNBP1Q96RU3 617 aa6.81□□□□□ -1.32
USP28-202ENST00000535607 MPHOSPH6Q99547 160 aaKnown RBP6.81□□□□□ -1.32
USP28-202ENST00000535607 ECSITQ9BQ95 431 aa6.81□□□□□ -1.32
USP28-202ENST00000535607 INTS2Q9H0H0 1204 aaKnown RBP6.81□□□□□ -1.32
USP28-202ENST00000535607 RIOX1Q9H6W3 641 aa6.81□□□□□ -1.32
USP28-202ENST00000535607 ERVK-5Q9HDB9 667 aa6.81□□□□□ -1.32
USP28-202ENST00000535607 SIX2Q9NPC8 291 aa6.81□□□□□ -1.32
USP28-202ENST00000535607 OLFML3Q9NRN5 406 aa6.81□□□□□ -1.32
USP28-202ENST00000535607 TBCCD1Q9NVR7 557 aa6.81□□□□□ -1.32
USP28-202ENST00000535607 ZDHHC7Q9NXF8 308 aa6.81□□□□□ -1.32
USP28-202ENST00000535607 GALNT8Q9NY28 637 aa6.81□□□□□ -1.32
USP28-202ENST00000535607 PLK2Q9NYY3 685 aa6.81□□□□□ -1.32
USP28-202ENST00000535607 NINJ2Q9NZG7 142 aa6.81□□□□□ -1.32
USP28-202ENST00000535607 TMOD4Q9NZQ9 345 aa6.81□□□□□ -1.32
USP28-202ENST00000535607 KCND2Q9NZV8 630 aa6.81□□□□□ -1.32
USP28-202ENST00000535607 H2AFY2Q9P0M6 372 aaPredicted RBP6.81□□□□□ -1.32
USP28-202ENST00000535607 PSMC3IPQ9P2W1 217 aaPredicted RBP6.81□□□□□ -1.32
USP28-202ENST00000535607 SAP30BPQ9UHR5 308 aaKnown RBP6.81□□□□□ -1.32
USP28-202ENST00000535607 GTF3C4Q9UKN8 822 aa6.81□□□□□ -1.32
USP28-202ENST00000535607 ZMYND8Q9ULU4 1186 aaPredicted RBP6.81□□□□□ -1.32
USP28-202ENST00000535607 PCDHAC2Q9Y5I4 1007 aa6.81□□□□□ -1.32
USP28-202ENST00000535607 DOCK1Q14185 1865 aa6.81□□□□□ -1.32
USP28-202ENST00000535607 DDTLA6NHG4 134 aaPredicted RBP6.8□□□□□ -1.32
USP28-202ENST00000535607 FAM90A27PA6NNH2 459 aa6.8□□□□□ -1.32
USP28-202ENST00000535607 MAFGO15525 162 aa6.8□□□□□ -1.32
USP28-202ENST00000535607 CYP1A2P05177 515 aa6.8□□□□□ -1.32
USP28-202ENST00000535607 PYGLP06737 847 aa6.8□□□□□ -1.32
USP28-202ENST00000535607 ASGR2P07307 311 aa6.8□□□□□ -1.32
USP28-202ENST00000535607 CYP2D6P10635 497 aa6.8□□□□□ -1.32
USP28-202ENST00000535607 IDO1P14902 403 aa6.8□□□□□ -1.32
USP28-202ENST00000535607 ANPEPP15144 967 aa6.8□□□□□ -1.32
USP28-202ENST00000535607 VEGFAP15692 232 aaPredicted RBP6.8□□□□□ -1.32
USP28-202ENST00000535607 RPA1P27694 616 aa6.8□□□□□ -1.32
USP28-202ENST00000535607 SDHAP31040 664 aa6.8□□□□□ -1.32
USP28-202ENST00000535607 FOXN2P32314 431 aa6.8□□□□□ -1.32
USP28-202ENST00000535607 ABCD1P33897 745 aa6.8□□□□□ -1.32
USP28-202ENST00000535607 SHMT1P34896 483 aa6.8□□□□□ -1.32
USP28-202ENST00000535607 ID4P47928 161 aa6.8□□□□□ -1.32
USP28-202ENST00000535607 HSPA13P48723 471 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms