RNA–Protein interactions for RNA: ENST00000532550.1

PHRF1-204, Transcript of PHD and ring finger domains 1, humanhuman

TSL 3

Gene PHRF1, Length 748 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-204ENST00000532550 SELENOOQ9BVL4 669 aa17.71■□□□□ 0.43
PHRF1-204ENST00000532550 TMPRSS4Q9NRS4 437 aa17.71■□□□□ 0.43
PHRF1-204ENST00000532550 KNL1Q8NG31 2342 aa17.71■□□□□ 0.43
PHRF1-204ENST00000532550 PCNX2A6NKB5 2137 aa17.7■□□□□ 0.42
PHRF1-204ENST00000532550 E9PAM4 449 aa17.7■□□□□ 0.42
PHRF1-204ENST00000532550 MID1O15344 667 aa17.7■□□□□ 0.42
PHRF1-204ENST00000532550 BCAT2O15382 392 aaPredicted RBP17.7■□□□□ 0.42
PHRF1-204ENST00000532550 RNASEH2AO75792 299 aaKnown RBP17.7■□□□□ 0.42
PHRF1-204ENST00000532550 RHOCP08134 193 aa17.7■□□□□ 0.42
PHRF1-204ENST00000532550 CSRP1P21291 193 aaKnown RBP17.7■□□□□ 0.42
PHRF1-204ENST00000532550 VASPP50552 380 aaPredicted RBP17.7■□□□□ 0.42
PHRF1-204ENST00000532550 NOVA1P51513 510 aaKnown RBP17.7■□□□□ 0.42
PHRF1-204ENST00000532550 CCDC14Q49A88 953 aa17.7■□□□□ 0.42
PHRF1-204ENST00000532550 C6orf118Q5T5N4 469 aa17.7■□□□□ 0.42
PHRF1-204ENST00000532550 N4BP2L1Q5TBK1 243 aaPredicted RBP17.7■□□□□ 0.42
PHRF1-204ENST00000532550 PSAPL1Q6NUJ1 521 aa17.7■□□□□ 0.42
PHRF1-204ENST00000532550 SETD3Q86TU7 594 aaPredicted RBP17.7■□□□□ 0.42
PHRF1-204ENST00000532550 PHF13Q86YI8 300 aaPredicted RBP17.7■□□□□ 0.42
PHRF1-204ENST00000532550 ZNF683Q8IZ20 524 aa17.7■□□□□ 0.42
PHRF1-204ENST00000532550 MINDY1Q8N5J2 469 aa17.7■□□□□ 0.42
PHRF1-204ENST00000532550 OR52K2Q8NGK3 314 aa17.7■□□□□ 0.42
PHRF1-204ENST00000532550 ZDHHC5Q9C0B5 715 aa17.7■□□□□ 0.42
PHRF1-204ENST00000532550 SLC32A1Q9H598 525 aa17.7■□□□□ 0.42
PHRF1-204ENST00000532550 MPP6Q9NZW5 540 aa17.7■□□□□ 0.42
PHRF1-204ENST00000532550 OR51B4Q9Y5P0 310 aa17.7■□□□□ 0.42
PHRF1-204ENST00000532550 IGLV3-10A0A075B6K4 115 aa17.69■□□□□ 0.42
PHRF1-204ENST00000532550 A0A1W2PP55 124 aa17.69■□□□□ 0.42
PHRF1-204ENST00000532550 C2CD4BA6NLJ0 364 aa17.69■□□□□ 0.42
PHRF1-204ENST00000532550 FSBPO95073 299 aa17.69■□□□□ 0.42
PHRF1-204ENST00000532550 ADH1BP00325 375 aa17.69■□□□□ 0.42
PHRF1-204ENST00000532550 IL1BP01584 269 aa17.69■□□□□ 0.42
PHRF1-204ENST00000532550 CEACAM1P13688 526 aa17.69■□□□□ 0.42
PHRF1-204ENST00000532550 TNFAIP3P21580 790 aa17.69■□□□□ 0.42
PHRF1-204ENST00000532550 C5AR1P21730 350 aa17.69■□□□□ 0.42
PHRF1-204ENST00000532550 OR1E1P30953 314 aa17.69■□□□□ 0.42
PHRF1-204ENST00000532550 PTPN9P43378 593 aa17.69■□□□□ 0.42
PHRF1-204ENST00000532550 PSMD8P48556 350 aa17.69■□□□□ 0.42
PHRF1-204ENST00000532550 PTP4A2Q12974 167 aa17.69■□□□□ 0.42
PHRF1-204ENST00000532550 ELAVL3Q14576 367 aaKnown RBP17.69■□□□□ 0.42
PHRF1-204ENST00000532550 DLG2Q15700 870 aa17.69■□□□□ 0.42
PHRF1-204ENST00000532550 C15orf59Q2T9L4 293 aaPredicted RBP17.69■□□□□ 0.42
PHRF1-204ENST00000532550 TFAP2DQ7Z6R9 452 aa17.69■□□□□ 0.42
PHRF1-204ENST00000532550 JOSD2Q8TAC2 188 aa17.69■□□□□ 0.42
PHRF1-204ENST00000532550 FRS2Q8WU20 508 aa17.69■□□□□ 0.42
PHRF1-204ENST00000532550 OR8D1Q8WZ84 308 aa17.69■□□□□ 0.42
PHRF1-204ENST00000532550 C2orf49Q9BVC5 232 aaPredicted RBP17.69■□□□□ 0.42
PHRF1-204ENST00000532550 ZYG11BQ9C0D3 744 aa17.69■□□□□ 0.42
PHRF1-204ENST00000532550 NEUROG2Q9H2A3 272 aa17.69■□□□□ 0.42
PHRF1-204ENST00000532550 MYO6Q9UM54 1294 aa17.69■□□□□ 0.42
PHRF1-204ENST00000532550 ZBTB32Q9Y2Y4 487 aaPredicted RBP17.69■□□□□ 0.42
PHRF1-204ENST00000532550 ANKRD62A6NC57 917 aa17.68■□□□□ 0.42
PHRF1-204ENST00000532550 FAM47DPA6NHR8 397 aa17.68■□□□□ 0.42
PHRF1-204ENST00000532550 LRRC72A6NJI9 287 aa17.68■□□□□ 0.42
PHRF1-204ENST00000532550 SIGLEC16A6NMB1 481 aa17.68■□□□□ 0.42
PHRF1-204ENST00000532550 ATP9BO43861 1147 aa17.68■□□□□ 0.42
PHRF1-204ENST00000532550 GJB6O95452 261 aa17.68■□□□□ 0.42
PHRF1-204ENST00000532550 GOT1P17174 413 aa17.68■□□□□ 0.42
PHRF1-204ENST00000532550 RFC1P35251 1148 aaPredicted RBP17.68■□□□□ 0.42
PHRF1-204ENST00000532550 ADRA1BP35368 520 aa17.68■□□□□ 0.42
PHRF1-204ENST00000532550 GSCP56915 257 aaPredicted RBP17.68■□□□□ 0.42
PHRF1-204ENST00000532550 TPM4P67936 248 aa17.68■□□□□ 0.42
PHRF1-204ENST00000532550 C1QBPQ07021 282 aaKnown RBP17.68■□□□□ 0.42
PHRF1-204ENST00000532550 KLHL40Q2TBA0 621 aa17.68■□□□□ 0.42
PHRF1-204ENST00000532550 ACAD10Q6JQN1 1059 aa17.68■□□□□ 0.42
PHRF1-204ENST00000532550 STRADAQ7RTN6 431 aa17.68■□□□□ 0.42
PHRF1-204ENST00000532550 IRF2BP2Q7Z5L9 587 aa17.68■□□□□ 0.42
PHRF1-204ENST00000532550 DSG4Q86SJ6 1040 aa17.68■□□□□ 0.42
PHRF1-204ENST00000532550 SH2D3CQ8N5H7 860 aa17.68■□□□□ 0.42
PHRF1-204ENST00000532550 C3orf20Q8ND61 904 aa17.68■□□□□ 0.42
PHRF1-204ENST00000532550 OR2I1PQ8NGU4 316 aa17.68■□□□□ 0.42
PHRF1-204ENST00000532550 BIRC7Q96CA5 298 aa17.68■□□□□ 0.42
PHRF1-204ENST00000532550 OR12D3Q9UGF7 316 aa17.68■□□□□ 0.42
PHRF1-204ENST00000532550 FZD4Q9ULV1 537 aa17.68■□□□□ 0.42
PHRF1-204ENST00000532550 DOCK4Q8N1I0 1966 aa17.68■□□□□ 0.42
PHRF1-204ENST00000532550 SYCE3A1L190 88 aa17.67■□□□□ 0.42
PHRF1-204ENST00000532550 GIPC1O14908 333 aa17.67■□□□□ 0.42
PHRF1-204ENST00000532550 SERPINC1P01008 464 aa17.67■□□□□ 0.42
PHRF1-204ENST00000532550 VAV1P15498 845 aa17.67■□□□□ 0.42
PHRF1-204ENST00000532550 GPD1P21695 349 aa17.67■□□□□ 0.42
PHRF1-204ENST00000532550 CD27P26842 260 aa17.67■□□□□ 0.42
PHRF1-204ENST00000532550 AFF3P51826 1226 aaKnown RBP17.67■□□□□ 0.42
PHRF1-204ENST00000532550 GALCP54803 685 aa17.67■□□□□ 0.42
PHRF1-204ENST00000532550 GRIK2Q13002 908 aa17.67■□□□□ 0.42
PHRF1-204ENST00000532550 SEMA3BQ13214 749 aa17.67■□□□□ 0.42
PHRF1-204ENST00000532550 IQCB1Q15051 598 aa17.67■□□□□ 0.42
PHRF1-204ENST00000532550 FAM46CQ5VWP2 391 aa17.67■□□□□ 0.42
PHRF1-204ENST00000532550 KIAA0895LQ68EN5 471 aa17.67■□□□□ 0.42
PHRF1-204ENST00000532550 WDR59Q6PJI9 974 aa17.67■□□□□ 0.42
PHRF1-204ENST00000532550 ATP11CQ8NB49 1132 aa17.67■□□□□ 0.42
PHRF1-204ENST00000532550 DEFB124Q8NES8 71 aa17.67■□□□□ 0.42
PHRF1-204ENST00000532550 C1orf216Q8TAB5 229 aa17.67■□□□□ 0.42
PHRF1-204ENST00000532550 FAM172AQ8WUF8 416 aa17.67■□□□□ 0.42
PHRF1-204ENST00000532550 CENPIQ92674 756 aaPredicted RBP17.67■□□□□ 0.42
PHRF1-204ENST00000532550 FUCA2Q9BTY2 467 aa17.67■□□□□ 0.42
PHRF1-204ENST00000532550 SPON2Q9BUD6 331 aa17.67■□□□□ 0.42
PHRF1-204ENST00000532550 DNAAF2Q9NVR5 837 aaKnown RBP17.67■□□□□ 0.42
PHRF1-204ENST00000532550 PPARGC1AQ9UBK2 798 aaKnown RBP17.67■□□□□ 0.42
PHRF1-204ENST00000532550 SERGEFQ9UGK8 458 aa17.67■□□□□ 0.42
PHRF1-204ENST00000532550 ADAMTS1Q9UHI8 967 aa17.67■□□□□ 0.42
PHRF1-204ENST00000532550 FARP1Q9Y4F1 1045 aaPredicted RBP17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms