RNA–Protein interactions for RNA: ENST00000528989.5

LDLRAD3-203, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LDLRAD3, Length 1,879 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-203ENST00000528989 BZW1Q7L1Q6 419 aaKnown RBP25.32■■□□□ 1.64
LDLRAD3-203ENST00000528989 FAM71DQ8N9W8 422 aa25.32■■□□□ 1.64
LDLRAD3-203ENST00000528989 ATL2Q8NHH9 583 aa25.32■■□□□ 1.64
LDLRAD3-203ENST00000528989 TFB1MQ8WVM0 346 aaKnown RBP25.32■■□□□ 1.64
LDLRAD3-203ENST00000528989 ATP2A3Q93084 1043 aa25.32■■□□□ 1.64
LDLRAD3-203ENST00000528989 ECT2Q9H8V3 914 aa25.32■■□□□ 1.64
LDLRAD3-203ENST00000528989 DONSONQ9NYP3 566 aa25.32■■□□□ 1.64
LDLRAD3-203ENST00000528989 PCYOX1Q9UHG3 505 aa25.32■■□□□ 1.64
LDLRAD3-203ENST00000528989 J3KR12 359 aa25.31■■□□□ 1.64
LDLRAD3-203ENST00000528989 TTI1O43156 1089 aa25.31■■□□□ 1.64
LDLRAD3-203ENST00000528989 MAFKO60675 156 aa25.31■■□□□ 1.64
LDLRAD3-203ENST00000528989 GLDCP23378 1020 aa25.31■■□□□ 1.64
LDLRAD3-203ENST00000528989 CD70P32970 193 aa25.31■■□□□ 1.64
LDLRAD3-203ENST00000528989 FNTAP49354 379 aa25.31■■□□□ 1.64
LDLRAD3-203ENST00000528989 XRCC4Q13426 336 aa25.31■■□□□ 1.64
LDLRAD3-203ENST00000528989 AAK1Q2M2I8 961 aa25.31■■□□□ 1.64
LDLRAD3-203ENST00000528989 C12orf40Q86WS4 652 aa25.31■■□□□ 1.64
LDLRAD3-203ENST00000528989 ZNF354CQ86Y25 554 aa25.31■■□□□ 1.64
LDLRAD3-203ENST00000528989 ARHGEF2Q92974 986 aaKnown RBP25.31■■□□□ 1.64
LDLRAD3-203ENST00000528989 SPON2Q9BUD6 331 aa25.31■■□□□ 1.64
LDLRAD3-203ENST00000528989 FRMD8P1Q9BZ68 369 aaPredicted RBP25.31■■□□□ 1.64
LDLRAD3-203ENST00000528989 EPC1Q9H2F5 836 aa25.31■■□□□ 1.64
LDLRAD3-203ENST00000528989 RETREG1Q9H6L5 497 aa25.31■■□□□ 1.64
LDLRAD3-203ENST00000528989 MARK1Q9P0L2 795 aa25.31■■□□□ 1.64
LDLRAD3-203ENST00000528989 KCNK1O00180 336 aa25.3■■□□□ 1.64
LDLRAD3-203ENST00000528989 ITGAVP06756 1048 aa25.3■■□□□ 1.64
LDLRAD3-203ENST00000528989 ADH5P11766 374 aa25.3■■□□□ 1.64
LDLRAD3-203ENST00000528989 MX2P20592 715 aa25.3■■□□□ 1.64
LDLRAD3-203ENST00000528989 HLA-FP30511 346 aa25.3■■□□□ 1.64
LDLRAD3-203ENST00000528989 PTGIRP43119 386 aa25.3■■□□□ 1.64
LDLRAD3-203ENST00000528989 SLC7A5Q01650 507 aa25.3■■□□□ 1.64
LDLRAD3-203ENST00000528989 TRIP13Q15645 432 aaPredicted RBP25.3■■□□□ 1.64
LDLRAD3-203ENST00000528989 SLC45A4Q5BKX6 768 aa25.3■■□□□ 1.64
LDLRAD3-203ENST00000528989 TEX35Q5T0J7 233 aa25.3■■□□□ 1.64
LDLRAD3-203ENST00000528989 LEKR1Q6ZMV7 388 aa25.3■■□□□ 1.64
LDLRAD3-203ENST00000528989 FIBINQ8TAL6 211 aa25.3■■□□□ 1.64
LDLRAD3-203ENST00000528989 QKIQ96PU8 341 aaKnown RBP eCLIP25.3■■□□□ 1.64
LDLRAD3-203ENST00000528989 FEM1AQ9BSK4 669 aa25.3■■□□□ 1.64
LDLRAD3-203ENST00000528989 MUC3BQ9H195 1237 aa25.3■■□□□ 1.64
LDLRAD3-203ENST00000528989 KCNK12Q9HB15 430 aa25.3■■□□□ 1.64
LDLRAD3-203ENST00000528989 DRG1Q9Y295 367 aaKnown RBP25.3■■□□□ 1.64
LDLRAD3-203ENST00000528989 ACTL7AQ9Y615 435 aa25.3■■□□□ 1.64
LDLRAD3-203ENST00000528989 RAD54BQ9Y620 910 aa25.3■■□□□ 1.64
LDLRAD3-203ENST00000528989 ILVBLA1L0T0 632 aa25.3■■□□□ 1.64
LDLRAD3-203ENST00000528989 SGK1O00141 431 aa25.3■■□□□ 1.64
LDLRAD3-203ENST00000528989 NCAM2O15394 837 aa25.3■■□□□ 1.64
LDLRAD3-203ENST00000528989 NFATC1O95644 943 aa25.3■■□□□ 1.64
LDLRAD3-203ENST00000528989 ASGR2P07307 311 aa25.3■■□□□ 1.64
LDLRAD3-203ENST00000528989 ZSCAN5DPP0CG00 497 aa25.3■■□□□ 1.64
LDLRAD3-203ENST00000528989 CSKP41240 450 aa25.3■■□□□ 1.64
LDLRAD3-203ENST00000528989 DR1Q01658 176 aa25.3■■□□□ 1.64
LDLRAD3-203ENST00000528989 PPIDQ08752 370 aaKnown RBP25.3■■□□□ 1.64
LDLRAD3-203ENST00000528989 LMAN2Q12907 356 aa25.3■■□□□ 1.64
LDLRAD3-203ENST00000528989 SERINC3Q13530 473 aa25.3■■□□□ 1.64
LDLRAD3-203ENST00000528989 NAA30Q147X3 362 aaPredicted RBP25.3■■□□□ 1.64
LDLRAD3-203ENST00000528989 PRKD1Q15139 912 aaPredicted RBP25.3■■□□□ 1.64
LDLRAD3-203ENST00000528989 PDGFRLQ15198 375 aa25.3■■□□□ 1.64
LDLRAD3-203ENST00000528989 PARP15Q460N3 678 aa25.3■■□□□ 1.64
LDLRAD3-203ENST00000528989 APCDD1Q8J025 514 aa25.3■■□□□ 1.64
LDLRAD3-203ENST00000528989 ATPAF2Q8N5M1 289 aa25.3■■□□□ 1.64
LDLRAD3-203ENST00000528989 HDAC11Q96DB2 347 aa25.3■■□□□ 1.64
LDLRAD3-203ENST00000528989 CEP41Q9BYV8 373 aa25.3■■□□□ 1.64
LDLRAD3-203ENST00000528989 IPO11Q9UI26 975 aaKnown RBP25.3■■□□□ 1.64
LDLRAD3-203ENST00000528989 PPP1R12AO14974 1030 aaPredicted RBP25.29■■□□□ 1.64
LDLRAD3-203ENST00000528989 CHADO15335 359 aa25.29■■□□□ 1.64
LDLRAD3-203ENST00000528989 KCNN4O15554 427 aa25.29■■□□□ 1.64
LDLRAD3-203ENST00000528989 IFNB1P01574 187 aa25.29■■□□□ 1.64
LDLRAD3-203ENST00000528989 YBEYP58557 167 aaPredicted RBP25.29■■□□□ 1.64
LDLRAD3-203ENST00000528989 RUNX3Q13761 415 aa25.29■■□□□ 1.64
LDLRAD3-203ENST00000528989 GAB4Q2WGN9 574 aa25.29■■□□□ 1.64
LDLRAD3-203ENST00000528989 NAIF1Q69YI7 327 aaPredicted RBP25.29■■□□□ 1.64
LDLRAD3-203ENST00000528989 IL31Q6EBC2 164 aa25.29■■□□□ 1.64
LDLRAD3-203ENST00000528989 GSTA5Q7RTV2 222 aa25.29■■□□□ 1.64
LDLRAD3-203ENST00000528989 ALG14Q96F25 216 aa25.29■■□□□ 1.64
LDLRAD3-203ENST00000528989 MAGEH1Q9H213 219 aa25.29■■□□□ 1.64
LDLRAD3-203ENST00000528989 ABCB8Q9NUT2 735 aa25.29■■□□□ 1.64
LDLRAD3-203ENST00000528989 OR51B4Q9Y5P0 310 aa25.29■■□□□ 1.64
LDLRAD3-203ENST00000528989 BCLAF3A2AJT9 711 aaKnown RBP25.28■■□□□ 1.64
LDLRAD3-203ENST00000528989 ARHGAP42A6NI28 874 aa25.28■■□□□ 1.64
LDLRAD3-203ENST00000528989 ARNTLO00327 626 aa25.28■■□□□ 1.64
LDLRAD3-203ENST00000528989 ADH1CP00326 375 aa25.28■■□□□ 1.64
LDLRAD3-203ENST00000528989 RHOXF2BP0C7M4 288 aa25.28■■□□□ 1.64
LDLRAD3-203ENST00000528989 MESP2Q0VG99 397 aa25.28■■□□□ 1.64
LDLRAD3-203ENST00000528989 ALLCQ8N6M5 410 aa25.28■■□□□ 1.64
LDLRAD3-203ENST00000528989 LMLNQ96KR4 655 aa25.28■■□□□ 1.64
LDLRAD3-203ENST00000528989 RHOXF2Q9BQY4 288 aa25.28■■□□□ 1.64
LDLRAD3-203ENST00000528989 TRIM51Q9BSJ1 452 aa25.28■■□□□ 1.64
LDLRAD3-203ENST00000528989 SEPT10Q9P0V9 454 aa25.28■■□□□ 1.64
LDLRAD3-203ENST00000528989 SLC6A11P48066 632 aa25.28■■□□□ 1.64
LDLRAD3-203ENST00000528989 GAD2Q05329 585 aa25.28■■□□□ 1.64
LDLRAD3-203ENST00000528989 C8orf74Q6P047 294 aa25.28■■□□□ 1.64
LDLRAD3-203ENST00000528989 HTR3CQ8WXA8 447 aa25.28■■□□□ 1.64
LDLRAD3-203ENST00000528989 INTS6Q9UL03 887 aaKnown RBP25.28■■□□□ 1.64
LDLRAD3-203ENST00000528989 NEU2Q9Y3R4 380 aa25.28■■□□□ 1.64
LDLRAD3-203ENST00000528989 EFCAB8A8MWE9 144 aa25.27■■□□□ 1.64
LDLRAD3-203ENST00000528989 HACD1B0YJ81 288 aa25.27■■□□□ 1.64
LDLRAD3-203ENST00000528989 HOXC11O43248 304 aaPredicted RBP25.27■■□□□ 1.64
LDLRAD3-203ENST00000528989 SNAP91O60641 907 aa25.27■■□□□ 1.64
LDLRAD3-203ENST00000528989 ECEL1O95672 775 aa25.27■■□□□ 1.64
LDLRAD3-203ENST00000528989 HEATR6Q6AI08 1181 aaKnown RBP25.27■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms