RNA–Protein interactions for RNA: ENST00000527326.1

CD44-225, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 718 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-225ENST00000527326 HPS6Q86YV9 775 aa5.94□□□□□ -1.46
CD44-225ENST00000527326 ARMC8Q8IUR7 673 aa5.94□□□□□ -1.46
CD44-225ENST00000527326 UNC45BQ8IWX7 931 aa5.94□□□□□ -1.46
CD44-225ENST00000527326 LINC00518Q8N0U6 118 aa5.94□□□□□ -1.46
CD44-225ENST00000527326 REXO1Q8N1G1 1221 aaKnown RBP5.94□□□□□ -1.46
CD44-225ENST00000527326 CLIP4Q8N3C7 705 aa5.94□□□□□ -1.46
CD44-225ENST00000527326 CCDC33Q8N5R6 958 aa5.94□□□□□ -1.46
CD44-225ENST00000527326 UBL4BQ8N7F7 174 aa5.94□□□□□ -1.46
CD44-225ENST00000527326 SNX31Q8N9S9 440 aa5.94□□□□□ -1.46
CD44-225ENST00000527326 ENKURQ8TC29 256 aa5.94□□□□□ -1.46
CD44-225ENST00000527326 DLG3Q92796 817 aa5.94□□□□□ -1.46
CD44-225ENST00000527326 DACT3Q96B18 629 aaPredicted RBP5.94□□□□□ -1.46
CD44-225ENST00000527326 C18orf8Q96DM3 657 aa5.94□□□□□ -1.46
CD44-225ENST00000527326 CEP95Q96GE4 821 aa5.94□□□□□ -1.46
CD44-225ENST00000527326 ZNF578Q96N58 590 aaPredicted RBP5.94□□□□□ -1.46
CD44-225ENST00000527326 OPALINQ96PE5 141 aa5.94□□□□□ -1.46
CD44-225ENST00000527326 RBM14Q96PK6 669 aaKnown RBP5.94□□□□□ -1.46
CD44-225ENST00000527326 DEPDC7Q96QD5 511 aa5.94□□□□□ -1.46
CD44-225ENST00000527326 C1QTNF7Q9BXJ2 289 aa5.94□□□□□ -1.46
CD44-225ENST00000527326 MTMR12Q9C0I1 747 aa5.94□□□□□ -1.46
CD44-225ENST00000527326 TMEM168Q9H0V1 697 aa5.94□□□□□ -1.46
CD44-225ENST00000527326 NAPBQ9H115 298 aa5.94□□□□□ -1.46
CD44-225ENST00000527326 ADNPQ9H2P0 1102 aa5.94□□□□□ -1.46
CD44-225ENST00000527326 GOLPH3Q9H4A6 298 aa5.94□□□□□ -1.46
CD44-225ENST00000527326 MANSC1Q9H8J5 431 aa5.94□□□□□ -1.46
CD44-225ENST00000527326 CXorf21Q9HAI6 301 aa5.94□□□□□ -1.46
CD44-225ENST00000527326 RAVER2Q9HCJ3 691 aaKnown RBP5.94□□□□□ -1.46
CD44-225ENST00000527326 KCTD5Q9NXV2 234 aa5.94□□□□□ -1.46
CD44-225ENST00000527326 NINJ2Q9NZG7 142 aa5.94□□□□□ -1.46
CD44-225ENST00000527326 FNIP2Q9P278 1114 aa5.94□□□□□ -1.46
CD44-225ENST00000527326 TXNDC16Q9P2K2 825 aa5.94□□□□□ -1.46
CD44-225ENST00000527326 ANAPC5Q9UJX4 755 aa5.94□□□□□ -1.46
CD44-225ENST00000527326 ZNF221Q9UK13 617 aa5.94□□□□□ -1.46
CD44-225ENST00000527326 USP21Q9UK80 565 aa5.94□□□□□ -1.46
CD44-225ENST00000527326 ITGA11Q9UKX5 1188 aa5.94□□□□□ -1.46
CD44-225ENST00000527326 CORINQ9Y5Q5 1042 aa5.94□□□□□ -1.46
CD44-225ENST00000527326 UTYO14607 1347 aa5.94□□□□□ -1.46
CD44-225ENST00000527326 MN1Q10571 1320 aaPredicted RBP5.94□□□□□ -1.46
CD44-225ENST00000527326 MYO3BQ8WXR4 1341 aa5.94□□□□□ -1.46
CD44-225ENST00000527326 KIF13BQ9NQT8 1826 aa5.93□□□□□ -1.46
CD44-225ENST00000527326 C1orf232A0A0U1RR37 186 aa5.93□□□□□ -1.46
CD44-225ENST00000527326 CCDC194A0A1B0GVG4 234 aa5.93□□□□□ -1.46
CD44-225ENST00000527326 SCO2A0A1W2PP80 73 aa5.93□□□□□ -1.46
CD44-225ENST00000527326 A0A1W2PPW3 197 aa5.93□□□□□ -1.46
CD44-225ENST00000527326 ARHGEF37A1IGU5 675 aa5.93□□□□□ -1.46
CD44-225ENST00000527326 TYW5A2RUC4 315 aaKnown RBP5.93□□□□□ -1.46
CD44-225ENST00000527326 WDR91A4D1P6 747 aa5.93□□□□□ -1.46
CD44-225ENST00000527326 OR6C65A6NJZ3 312 aa5.93□□□□□ -1.46
CD44-225ENST00000527326 A8MU76 341 aa5.93□□□□□ -1.46
CD44-225ENST00000527326 MEI4A8MW99 385 aa5.93□□□□□ -1.46
CD44-225ENST00000527326 A8MX80 341 aa5.93□□□□□ -1.46
CD44-225ENST00000527326 FAM155AB1AL88 458 aaPredicted RBP5.93□□□□□ -1.46
CD44-225ENST00000527326 H3BUI4 141 aa5.93□□□□□ -1.46
CD44-225ENST00000527326 FOXN3O00409 490 aaPredicted RBP5.93□□□□□ -1.46
CD44-225ENST00000527326 KLF11O14901 512 aa5.93□□□□□ -1.46
CD44-225ENST00000527326 MUSKO15146 869 aa5.93□□□□□ -1.46
CD44-225ENST00000527326 GPR182O15218 404 aa5.93□□□□□ -1.46
CD44-225ENST00000527326 HDAC3O15379 428 aa5.93□□□□□ -1.46
CD44-225ENST00000527326 KLRC4O43908 158 aa5.93□□□□□ -1.46
CD44-225ENST00000527326 TYROBPO43914 113 aa5.93□□□□□ -1.46
CD44-225ENST00000527326 GAS7O60861 476 aa5.93□□□□□ -1.46
CD44-225ENST00000527326 ADAM11O75078 769 aa5.93□□□□□ -1.46
CD44-225ENST00000527326 KRT37O76014 449 aa5.93□□□□□ -1.46
CD44-225ENST00000527326 OR7A10O76100 309 aa5.93□□□□□ -1.46
CD44-225ENST00000527326 ASS1P00966 412 aaKnown RBP5.93□□□□□ -1.46
CD44-225ENST00000527326 IFNA14P01570 189 aa5.93□□□□□ -1.46
CD44-225ENST00000527326 GSNP06396 782 aa5.93□□□□□ -1.46
CD44-225ENST00000527326 DLDP09622 509 aaKnown RBP5.93□□□□□ -1.46
CD44-225ENST00000527326 GAP43P17677 238 aa5.93□□□□□ -1.46
CD44-225ENST00000527326 AOC1P19801 751 aa5.93□□□□□ -1.46
CD44-225ENST00000527326 CYP3A5P20815 502 aa5.93□□□□□ -1.46
CD44-225ENST00000527326 MAP4P27816 1152 aaKnown RBP5.93□□□□□ -1.46
CD44-225ENST00000527326 RBL1P28749 1068 aa5.93□□□□□ -1.46
CD44-225ENST00000527326 EEF1DP29692 281 aaKnown RBP5.93□□□□□ -1.46
CD44-225ENST00000527326 COILP38432 576 aaPredicted RBP5.93□□□□□ -1.46
CD44-225ENST00000527326 CASP3P42574 277 aa5.93□□□□□ -1.46
CD44-225ENST00000527326 MAPK8P45983 427 aa5.93□□□□□ -1.46
CD44-225ENST00000527326 HCAR3P49019 387 aa5.93□□□□□ -1.46
CD44-225ENST00000527326 NR2C2P49116 596 aa5.93□□□□□ -1.46
CD44-225ENST00000527326 PRAMEP78395 509 aa5.93□□□□□ -1.46
CD44-225ENST00000527326 GNA12Q03113 381 aa5.93□□□□□ -1.46
CD44-225ENST00000527326 BAMBIQ13145 260 aa5.93□□□□□ -1.46
CD44-225ENST00000527326 AP3B2Q13367 1082 aa5.93□□□□□ -1.46
CD44-225ENST00000527326 TAF5Q15542 800 aa5.93□□□□□ -1.46
CD44-225ENST00000527326 TSC22D1Q15714 1073 aa5.93□□□□□ -1.46
CD44-225ENST00000527326 INAVAQ3KP66 663 aa5.93□□□□□ -1.46
CD44-225ENST00000527326 ALFQ53S48 1182 aa5.93□□□□□ -1.46
CD44-225ENST00000527326 ESCO2Q56NI9 601 aa5.93□□□□□ -1.46
CD44-225ENST00000527326 TNNI3KQ59H18 835 aa5.93□□□□□ -1.46
CD44-225ENST00000527326 C6orf52Q5T4I8 152 aa5.93□□□□□ -1.46
CD44-225ENST00000527326 SEL1L2Q5TEA6 688 aa5.93□□□□□ -1.46
CD44-225ENST00000527326 C12orf60Q5U649 245 aa5.93□□□□□ -1.46
CD44-225ENST00000527326 ANKRD40Q6AI12 368 aa5.93□□□□□ -1.46
CD44-225ENST00000527326 CNNM4Q6P4Q7 775 aa5.93□□□□□ -1.46
CD44-225ENST00000527326 GADL1Q6ZQY3 521 aa5.93□□□□□ -1.46
CD44-225ENST00000527326 FKBP9P1Q75LS8 142 aa5.93□□□□□ -1.46
CD44-225ENST00000527326 TXNRD3Q86VQ6 643 aa5.93□□□□□ -1.46
CD44-225ENST00000527326 ATCAYQ86WG3 371 aa5.93□□□□□ -1.46
CD44-225ENST00000527326 HORMAD1Q86X24 394 aa5.93□□□□□ -1.46
CD44-225ENST00000527326 PM20D2Q8IYS1 436 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms