RNA–Protein interactions for RNA: ENST00000526696.6

SSRP1-203, Transcript of structure specific recognition protein 1, humanhuman

TSL 3

Gene SSRP1, Length 948 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-203ENST00000526696 TMPRSS4Q9NRS4 437 aa13.97□□□□□ -0.17
SSRP1-203ENST00000526696 GPR27Q9NS67 375 aa13.97□□□□□ -0.17
SSRP1-203ENST00000526696 FOXJ2Q9P0K8 574 aa13.97□□□□□ -0.17
SSRP1-203ENST00000526696 STIM2Q9P246 746 aa13.97□□□□□ -0.17
SSRP1-203ENST00000526696 ADGRG4Q8IZF6 3080 aa13.97□□□□□ -0.17
SSRP1-203ENST00000526696 NAV3Q8IVL0 2385 aa13.96□□□□□ -0.17
SSRP1-203ENST00000526696 PRAMEF33A0A0G2JMD5 474 aa13.96□□□□□ -0.17
SSRP1-203ENST00000526696 A1L4Q6 167 aa13.96□□□□□ -0.17
SSRP1-203ENST00000526696 TGFB1I1O43294 461 aa13.96□□□□□ -0.17
SSRP1-203ENST00000526696 MSI1O43347 362 aaKnown RBP13.96□□□□□ -0.17
SSRP1-203ENST00000526696 PRAMEF10O60809 474 aa13.96□□□□□ -0.17
SSRP1-203ENST00000526696 RNGTTO60942 597 aaKnown RBP13.96□□□□□ -0.17
SSRP1-203ENST00000526696 PHACTR2O75167 634 aa13.96□□□□□ -0.17
SSRP1-203ENST00000526696 KIF20AO95235 890 aa13.96□□□□□ -0.17
SSRP1-203ENST00000526696 SRPRAP08240 638 aaKnown RBP13.96□□□□□ -0.17
SSRP1-203ENST00000526696 ITIH1P19827 911 aa13.96□□□□□ -0.17
SSRP1-203ENST00000526696 STK19P49842 368 aaPredicted RBP13.96□□□□□ -0.17
SSRP1-203ENST00000526696 NCOA4Q13772 614 aa13.96□□□□□ -0.17
SSRP1-203ENST00000526696 FZD2Q14332 565 aa13.96□□□□□ -0.17
SSRP1-203ENST00000526696 NR0B2Q15466 257 aa13.96□□□□□ -0.17
SSRP1-203ENST00000526696 PITRM1Q5JRX3 1037 aa13.96□□□□□ -0.17
SSRP1-203ENST00000526696 MCTP1Q6DN14 999 aa13.96□□□□□ -0.17
SSRP1-203ENST00000526696 OR6B2Q6IFH4 312 aa13.96□□□□□ -0.17
SSRP1-203ENST00000526696 SPOPLQ6IQ16 392 aa13.96□□□□□ -0.17
SSRP1-203ENST00000526696 ABI3BPQ7Z7G0 1075 aa13.96□□□□□ -0.17
SSRP1-203ENST00000526696 SLC35F3Q8IY50 421 aa13.96□□□□□ -0.17
SSRP1-203ENST00000526696 CCDC3Q9BQI4 270 aa13.96□□□□□ -0.17
SSRP1-203ENST00000526696 BOCQ9BWV1 1114 aa13.96□□□□□ -0.17
SSRP1-203ENST00000526696 DUSP16Q9BY84 665 aa13.96□□□□□ -0.17
SSRP1-203ENST00000526696 FOXP3Q9BZS1 431 aa13.96□□□□□ -0.17
SSRP1-203ENST00000526696 AGPAT3Q9NRZ7 376 aa13.96□□□□□ -0.17
SSRP1-203ENST00000526696 PANK4Q9NVE7 773 aa13.96□□□□□ -0.17
SSRP1-203ENST00000526696 PISDQ9UG56 409 aa13.96□□□□□ -0.17
SSRP1-203ENST00000526696 SALL4Q9UJQ4 1053 aa13.96□□□□□ -0.17
SSRP1-203ENST00000526696 TUBD1Q9UJT1 453 aa13.96□□□□□ -0.17
SSRP1-203ENST00000526696 LIMCH1Q9UPQ0 1083 aa13.96□□□□□ -0.17
SSRP1-203ENST00000526696 CELSR1Q9NYQ6 3014 aa13.96□□□□□ -0.18
SSRP1-203ENST00000526696 NF1P21359 2839 aa13.96□□□□□ -0.18
SSRP1-203ENST00000526696 CLIC2O15247 247 aa13.95□□□□□ -0.18
SSRP1-203ENST00000526696 AGFG2O95081 481 aa13.95□□□□□ -0.18
SSRP1-203ENST00000526696 LATS1O95835 1130 aa13.95□□□□□ -0.18
SSRP1-203ENST00000526696 C4BPAP04003 597 aaKnown RBP13.95□□□□□ -0.18
SSRP1-203ENST00000526696 SLFN14P0C7P3 912 aa13.95□□□□□ -0.18
SSRP1-203ENST00000526696 NME1P15531 152 aaKnown RBP13.95□□□□□ -0.18
SSRP1-203ENST00000526696 ELAVL4P26378 380 aaKnown RBP13.95□□□□□ -0.18
SSRP1-203ENST00000526696 ETV5P41161 510 aa13.95□□□□□ -0.18
SSRP1-203ENST00000526696 NUMBP49757 651 aa13.95□□□□□ -0.18
SSRP1-203ENST00000526696 CYP2J2P51589 502 aa13.95□□□□□ -0.18
SSRP1-203ENST00000526696 HNRNPKP61978 463 aaKnown RBP eCLIP13.95□□□□□ -0.18
SSRP1-203ENST00000526696 BIRC3Q13489 604 aa13.95□□□□□ -0.18
SSRP1-203ENST00000526696 ELAVL3Q14576 367 aaKnown RBP13.95□□□□□ -0.18
SSRP1-203ENST00000526696 ZNF284Q2VY69 593 aa13.95□□□□□ -0.18
SSRP1-203ENST00000526696 RAB41Q5JT25 222 aa13.95□□□□□ -0.18
SSRP1-203ENST00000526696 TPRG1LQ5T0D9 272 aa13.95□□□□□ -0.18
SSRP1-203ENST00000526696 PPP1R26Q5T8A7 1209 aaPredicted RBP13.95□□□□□ -0.18
SSRP1-203ENST00000526696 Q6ZSR6 202 aa13.95□□□□□ -0.18
SSRP1-203ENST00000526696 DSG4Q86SJ6 1040 aa13.95□□□□□ -0.18
SSRP1-203ENST00000526696 APCDD1Q8J025 514 aa13.95□□□□□ -0.18
SSRP1-203ENST00000526696 FRS2Q8WU20 508 aa13.95□□□□□ -0.18
SSRP1-203ENST00000526696 PPP1R13BQ96KQ4 1090 aa13.95□□□□□ -0.18
SSRP1-203ENST00000526696 BMFQ96LC9 184 aa13.95□□□□□ -0.18
SSRP1-203ENST00000526696 SYNDIG1Q9H7V2 258 aa13.95□□□□□ -0.18
SSRP1-203ENST00000526696 SEPT10Q9P0V9 454 aa13.95□□□□□ -0.18
SSRP1-203ENST00000526696 STK17AQ9UEE5 414 aa13.95□□□□□ -0.18
SSRP1-203ENST00000526696 RABGEF1Q9UJ41 708 aa13.95□□□□□ -0.18
SSRP1-203ENST00000526696 HBS1LQ9Y450 684 aaKnown RBP13.95□□□□□ -0.18
SSRP1-203ENST00000526696 CSNK1G3Q9Y6M4 447 aa13.95□□□□□ -0.18
SSRP1-203ENST00000526696 A0A1W2PQU0 124 aa13.94□□□□□ -0.18
SSRP1-203ENST00000526696 AQP9O43315 295 aa13.94□□□□□ -0.18
SSRP1-203ENST00000526696 STX6O43752 255 aa13.94□□□□□ -0.18
SSRP1-203ENST00000526696 CLSTN1O94985 981 aa13.94□□□□□ -0.18
SSRP1-203ENST00000526696 CSF2P04141 144 aa13.94□□□□□ -0.18
SSRP1-203ENST00000526696 DCTP40126 519 aa13.94□□□□□ -0.18
SSRP1-203ENST00000526696 RPS24P62847 133 aaKnown RBP13.94□□□□□ -0.18
SSRP1-203ENST00000526696 EIF3IQ13347 325 aaKnown RBP13.94□□□□□ -0.18
SSRP1-203ENST00000526696 NADSYN1Q6IA69 706 aa13.94□□□□□ -0.18
SSRP1-203ENST00000526696 ARHGAP18Q8N392 663 aa13.94□□□□□ -0.18
SSRP1-203ENST00000526696 PREBQ9HCU5 417 aa13.94□□□□□ -0.18
SSRP1-203ENST00000526696 NCKIPSDQ9NZQ3 722 aa13.94□□□□□ -0.18
SSRP1-203ENST00000526696 ZFR2Q9UPR6 939 aaKnown RBP13.94□□□□□ -0.18
SSRP1-203ENST00000526696 SHANK1Q9Y566 2161 aa13.94□□□□□ -0.18
SSRP1-203ENST00000526696 HIVEP1P15822 2718 aa13.94□□□□□ -0.18
SSRP1-203ENST00000526696 LRRIQ3A6PVS8 624 aaPredicted RBP13.93□□□□□ -0.18
SSRP1-203ENST00000526696 C9orf172C9J069 976 aa13.93□□□□□ -0.18
SSRP1-203ENST00000526696 AGRPO00253 132 aa13.93□□□□□ -0.18
SSRP1-203ENST00000526696 SEMA7AO75326 666 aa13.93□□□□□ -0.18
SSRP1-203ENST00000526696 MLLT10P55197 1068 aa13.93□□□□□ -0.18
SSRP1-203ENST00000526696 ECT2LQ008S8 904 aa13.93□□□□□ -0.18
SSRP1-203ENST00000526696 INCA1Q0VD86 236 aa13.93□□□□□ -0.18
SSRP1-203ENST00000526696 PIP5KL1Q5T9C9 394 aa13.93□□□□□ -0.18
SSRP1-203ENST00000526696 SV2BQ7L1I2 683 aa13.93□□□□□ -0.18
SSRP1-203ENST00000526696 PIGZQ86VD9 579 aa13.93□□□□□ -0.18
SSRP1-203ENST00000526696 CARNMT1Q8N4J0 409 aa13.93□□□□□ -0.18
SSRP1-203ENST00000526696 XXYLT1Q8NBI6 393 aa13.93□□□□□ -0.18
SSRP1-203ENST00000526696 WDR48Q8TAF3 677 aa13.93□□□□□ -0.18
SSRP1-203ENST00000526696 LMX1AQ8TE12 382 aa13.93□□□□□ -0.18
SSRP1-203ENST00000526696 SSC4DQ8WTU2 575 aa13.93□□□□□ -0.18
SSRP1-203ENST00000526696 JPH3Q8WXH2 748 aaPredicted RBP13.93□□□□□ -0.18
SSRP1-203ENST00000526696 EDEM1Q92611 657 aa13.93□□□□□ -0.18
SSRP1-203ENST00000526696 SPAG5Q96R06 1193 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms