RNA–Protein interactions for RNA: ENST00000524258.2

CLN8-207, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 2

Gene CLN8, Length 835 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-207ENST00000524258 RLN3Q8WXF3 142 aa12.27□□□□□ -0.45
CLN8-207ENST00000524258 PTPRN2Q92932 1015 aa12.27□□□□□ -0.45
CLN8-207ENST00000524258 NKD2Q969F2 451 aaPredicted RBP12.27□□□□□ -0.45
CLN8-207ENST00000524258 VOPP1Q96AW1 172 aa12.27□□□□□ -0.45
CLN8-207ENST00000524258 TBC1D31Q96DN5 1066 aa12.27□□□□□ -0.45
CLN8-207ENST00000524258 RPL10LQ96L21 214 aaKnown RBP12.27□□□□□ -0.45
CLN8-207ENST00000524258 CCDC42Q96M95 316 aa12.27□□□□□ -0.45
CLN8-207ENST00000524258 KCTD15Q96SI1 283 aaPredicted RBP12.27□□□□□ -0.45
CLN8-207ENST00000524258 FAM129BQ96TA1 746 aa12.27□□□□□ -0.45
CLN8-207ENST00000524258 DUSP15Q9H1R2 295 aaPredicted RBP12.27□□□□□ -0.45
CLN8-207ENST00000524258 OSGEPQ9NPF4 335 aa12.27□□□□□ -0.45
CLN8-207ENST00000524258 PCSK1NQ9UHG2 260 aa12.27□□□□□ -0.45
CLN8-207ENST00000524258 VPS51Q9UID3 782 aa12.27□□□□□ -0.45
CLN8-207ENST00000524258 ANAPC7Q9UJX3 599 aa12.27□□□□□ -0.45
CLN8-207ENST00000524258 USP18Q9UMW8 372 aa12.27□□□□□ -0.45
CLN8-207ENST00000524258 PLA2G4CQ9UP65 541 aa12.27□□□□□ -0.45
CLN8-207ENST00000524258 INVSQ9Y283 1065 aa12.27□□□□□ -0.45
CLN8-207ENST00000524258 GON4LQ3T8J9 2241 aa12.26□□□□□ -0.45
CLN8-207ENST00000524258 C10orf142B7Z368 130 aa12.26□□□□□ -0.45
CLN8-207ENST00000524258 ZNF821O75541 412 aaPredicted RBP12.26□□□□□ -0.45
CLN8-207ENST00000524258 RPP40O75818 363 aaKnown RBP12.26□□□□□ -0.45
CLN8-207ENST00000524258 ALDH1A2O94788 518 aa12.26□□□□□ -0.45
CLN8-207ENST00000524258 PROSCO94903 275 aa12.26□□□□□ -0.45
CLN8-207ENST00000524258 IGLV3-19P01714 112 aa12.26□□□□□ -0.45
CLN8-207ENST00000524258 EPHX1P07099 455 aa12.26□□□□□ -0.45
CLN8-207ENST00000524258 RHOCP08134 193 aa12.26□□□□□ -0.45
CLN8-207ENST00000524258 VAV1P15498 845 aa12.26□□□□□ -0.45
CLN8-207ENST00000524258 OR1E1P30953 314 aa12.26□□□□□ -0.45
CLN8-207ENST00000524258 ACVRL1P37023 503 aa12.26□□□□□ -0.45
CLN8-207ENST00000524258 MAPKAPK2P49137 400 aa12.26□□□□□ -0.45
CLN8-207ENST00000524258 ARSEP51690 589 aa12.26□□□□□ -0.45
CLN8-207ENST00000524258 GNA12Q03113 381 aa12.26□□□□□ -0.45
CLN8-207ENST00000524258 SULT2A1Q06520 285 aa12.26□□□□□ -0.45
CLN8-207ENST00000524258 E2F5Q15329 346 aa12.26□□□□□ -0.45
CLN8-207ENST00000524258 TSR1Q2NL82 804 aaKnown RBP12.26□□□□□ -0.45
CLN8-207ENST00000524258 PLK5Q496M5 336 aa12.26□□□□□ -0.45
CLN8-207ENST00000524258 FNDC3BQ53EP0 1204 aaKnown RBP12.26□□□□□ -0.45
CLN8-207ENST00000524258 EFHC2Q5JST6 749 aa12.26□□□□□ -0.45
CLN8-207ENST00000524258 FAM160A2Q8N612 972 aaPredicted RBP12.26□□□□□ -0.45
CLN8-207ENST00000524258 RTL3Q8N8U3 475 aaKnown RBP12.26□□□□□ -0.45
CLN8-207ENST00000524258 DCAF4L2Q8NA75 395 aa12.26□□□□□ -0.45
CLN8-207ENST00000524258 OR2T3Q8NH03 318 aa12.26□□□□□ -0.45
CLN8-207ENST00000524258 ZNF564Q8TBZ8 553 aaPredicted RBP12.26□□□□□ -0.45
CLN8-207ENST00000524258 FAM71BQ8TC56 605 aa12.26□□□□□ -0.45
CLN8-207ENST00000524258 ARHGEF2Q92974 986 aaKnown RBP12.26□□□□□ -0.45
CLN8-207ENST00000524258 ANP32EQ9BTT0 268 aa12.26□□□□□ -0.45
CLN8-207ENST00000524258 ITM2CQ9NQX7 267 aa12.26□□□□□ -0.45
CLN8-207ENST00000524258 USP36Q9P275 1121 aaKnown RBP12.26□□□□□ -0.45
CLN8-207ENST00000524258 UVRAGQ9P2Y5 699 aa12.26□□□□□ -0.45
CLN8-207ENST00000524258 IP6K2Q9UHH9 426 aa12.26□□□□□ -0.45
CLN8-207ENST00000524258 INTUQ9ULD6 942 aa12.26□□□□□ -0.45
CLN8-207ENST00000524258 AP4E1Q9UPM8 1137 aa12.26□□□□□ -0.45
CLN8-207ENST00000524258 SMG5Q9UPR3 1016 aaKnown RBP12.26□□□□□ -0.45
CLN8-207ENST00000524258 HS3ST2Q9Y278 367 aa12.26□□□□□ -0.45
CLN8-207ENST00000524258 REXO2Q9Y3B8 237 aaKnown RBP12.26□□□□□ -0.45
CLN8-207ENST00000524258 IGHV1OR15-9A0A0B4J2B8 117 aa12.25□□□□□ -0.45
CLN8-207ENST00000524258 TARSL2A2RTX5 802 aaKnown RBP12.25□□□□□ -0.45
CLN8-207ENST00000524258 EIF3CLB5ME19 914 aaKnown RBP12.25□□□□□ -0.45
CLN8-207ENST00000524258 K7ERQ8 282 aa12.25□□□□□ -0.45
CLN8-207ENST00000524258 SMAD6O43541 496 aaKnown RBP12.25□□□□□ -0.45
CLN8-207ENST00000524258 SIN3BO75182 1162 aa12.25□□□□□ -0.45
CLN8-207ENST00000524258 RNF8O76064 485 aa12.25□□□□□ -0.45
CLN8-207ENST00000524258 MOCS3O95396 460 aa12.25□□□□□ -0.45
CLN8-207ENST00000524258 RARAP10276 462 aa12.25□□□□□ -0.45
CLN8-207ENST00000524258 SRCP12931 536 aa12.25□□□□□ -0.45
CLN8-207ENST00000524258 IL4RP24394 825 aa12.25□□□□□ -0.45
CLN8-207ENST00000524258 HTR7P34969 479 aa12.25□□□□□ -0.45
CLN8-207ENST00000524258 HCAR3P49019 387 aa12.25□□□□□ -0.45
CLN8-207ENST00000524258 TAS2R40P59535 323 aa12.25□□□□□ -0.45
CLN8-207ENST00000524258 RPS14P62263 151 aaKnown RBP12.25□□□□□ -0.45
CLN8-207ENST00000524258 ARF5P84085 180 aa12.25□□□□□ -0.45
CLN8-207ENST00000524258 DPYSQ14117 519 aa12.25□□□□□ -0.45
CLN8-207ENST00000524258 SIM2Q14190 667 aaPredicted RBP12.25□□□□□ -0.45
CLN8-207ENST00000524258 DPYSL2Q16555 572 aa12.25□□□□□ -0.45
CLN8-207ENST00000524258 BOLA3Q53S33 107 aa12.25□□□□□ -0.45
CLN8-207ENST00000524258 C6orf118Q5T5N4 469 aa12.25□□□□□ -0.45
CLN8-207ENST00000524258 AFMIDQ63HM1 303 aa12.25□□□□□ -0.45
CLN8-207ENST00000524258 RWDD4Q6NW29 188 aaKnown RBP12.25□□□□□ -0.45
CLN8-207ENST00000524258 RAD9BQ6WBX8 426 aa12.25□□□□□ -0.45
CLN8-207ENST00000524258 ALYREFQ86V81 257 aaKnown RBP12.25□□□□□ -0.45
CLN8-207ENST00000524258 TMPRSS6Q8IU80 811 aa12.25□□□□□ -0.45
CLN8-207ENST00000524258 CCDC117Q8IWD4 279 aaPredicted RBP12.25□□□□□ -0.45
CLN8-207ENST00000524258 CCDC170Q8IYT3 715 aa12.25□□□□□ -0.45
CLN8-207ENST00000524258 UMODL1-AS1Q8N2C9 162 aa12.25□□□□□ -0.45
CLN8-207ENST00000524258 SH2D3CQ8N5H7 860 aa12.25□□□□□ -0.45
CLN8-207ENST00000524258 SLC35G2Q8TBE7 412 aa12.25□□□□□ -0.45
CLN8-207ENST00000524258 TSC1Q92574 1164 aa12.25□□□□□ -0.45
CLN8-207ENST00000524258 EIF3CQ99613 913 aaKnown RBP12.25□□□□□ -0.45
CLN8-207ENST00000524258 NCAPGQ9BPX3 1015 aa12.25□□□□□ -0.45
CLN8-207ENST00000524258 RSPH9Q9H1X1 276 aaPredicted RBP12.25□□□□□ -0.45
CLN8-207ENST00000524258 DEF6Q9H4E7 631 aa12.25□□□□□ -0.45
CLN8-207ENST00000524258 LRRC19Q9H756 370 aa12.25□□□□□ -0.45
CLN8-207ENST00000524258 CWC15Q9P013 229 aaKnown RBP12.25□□□□□ -0.45
CLN8-207ENST00000524258 SUN2Q9UH99 717 aa12.25□□□□□ -0.45
CLN8-207ENST00000524258 VPS28Q9UK41 221 aa12.25□□□□□ -0.45
CLN8-207ENST00000524258 ACTL7AQ9Y615 435 aa12.25□□□□□ -0.45
CLN8-207ENST00000524258 CXorf51AA0A1B0GTR3 108 aa12.24□□□□□ -0.45
CLN8-207ENST00000524258 RCCD1A6NED2 376 aa12.24□□□□□ -0.45
CLN8-207ENST00000524258 SOWAHDA6NJG2 315 aa12.24□□□□□ -0.45
CLN8-207ENST00000524258 MYO1FO00160 1098 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms