RNA–Protein interactions for RNA: ENST00000522353.2

PCDHA3-201, Transcript of protocadherin alpha 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA3, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-201ENST00000522353 N4BP2L1Q5TBK1 243 aaPredicted RBP16.52■□□□□ 0.24
PCDHA3-201ENST00000522353 ZMAT2Q96NC0 199 aaKnown RBP16.52■□□□□ 0.24
PCDHA3-201ENST00000522353 RPTORQ8N122 1335 aa16.52■□□□□ 0.24
PCDHA3-201ENST00000522353 TLR5O60602 858 aa16.52■□□□□ 0.23
PCDHA3-201ENST00000522353 ZNF682O95780 498 aa16.52■□□□□ 0.23
PCDHA3-201ENST00000522353 CALB2P22676 271 aa16.52■□□□□ 0.23
PCDHA3-201ENST00000522353 RBL1P28749 1068 aa16.52■□□□□ 0.23
PCDHA3-201ENST00000522353 PSTKQ8IV42 348 aaKnown RBP16.52■□□□□ 0.23
PCDHA3-201ENST00000522353 PPP1R13LQ8WUF5 828 aa16.52■□□□□ 0.23
PCDHA3-201ENST00000522353 L1RE1Q9UN81 338 aa16.52■□□□□ 0.23
PCDHA3-201ENST00000522353 KIF1AQ12756 1690 aa16.52■□□□□ 0.23
PCDHA3-201ENST00000522353 A0A0A0MRY4 1105 aa16.52■□□□□ 0.23
PCDHA3-201ENST00000522353 IL1BP01584 269 aa16.52■□□□□ 0.23
PCDHA3-201ENST00000522353 MMP3P08254 477 aa16.52■□□□□ 0.23
PCDHA3-201ENST00000522353 CLTBP09497 229 aa16.52■□□□□ 0.23
PCDHA3-201ENST00000522353 PCID2Q5JVF3 399 aa16.52■□□□□ 0.23
PCDHA3-201ENST00000522353 MON1AQ86VX9 555 aa16.52■□□□□ 0.23
PCDHA3-201ENST00000522353 COLGALT2Q8IYK4 626 aa16.52■□□□□ 0.23
PCDHA3-201ENST00000522353 SPATA13Q96N96 652 aa16.52■□□□□ 0.23
PCDHA3-201ENST00000522353 OSBPL10Q9BXB5 764 aa16.52■□□□□ 0.23
PCDHA3-201ENST00000522353 ASB8Q9H765 288 aa16.52■□□□□ 0.23
PCDHA3-201ENST00000522353 ENTPD4Q9Y227 616 aa16.52■□□□□ 0.23
PCDHA3-201ENST00000522353 ANKDD1BA6NHY2 528 aa16.51■□□□□ 0.23
PCDHA3-201ENST00000522353 VPS4BO75351 444 aa16.51■□□□□ 0.23
PCDHA3-201ENST00000522353 ACSM2AQ08AH3 577 aa16.51■□□□□ 0.23
PCDHA3-201ENST00000522353 ACSM2BQ68CK6 577 aa16.51■□□□□ 0.23
PCDHA3-201ENST00000522353 CD99L2Q8TCZ2 262 aa16.51■□□□□ 0.23
PCDHA3-201ENST00000522353 SLC24A3Q9HC58 644 aa16.51■□□□□ 0.23
PCDHA3-201ENST00000522353 SLC27A5Q9Y2P5 690 aa16.51■□□□□ 0.23
PCDHA3-201ENST00000522353 TRDMT1O14717 391 aaKnown RBP16.51■□□□□ 0.23
PCDHA3-201ENST00000522353 ERBB2P04626 1255 aa16.51■□□□□ 0.23
PCDHA3-201ENST00000522353 ADRB2P07550 413 aa16.51■□□□□ 0.23
PCDHA3-201ENST00000522353 CES1P23141 567 aa16.51■□□□□ 0.23
PCDHA3-201ENST00000522353 FMO4P31512 558 aa16.51■□□□□ 0.23
PCDHA3-201ENST00000522353 CDK7P50613 346 aa16.51■□□□□ 0.23
PCDHA3-201ENST00000522353 MRPS15P82914 257 aaKnown RBP16.51■□□□□ 0.23
PCDHA3-201ENST00000522353 USP39Q53GS9 565 aaKnown RBP16.51■□□□□ 0.23
PCDHA3-201ENST00000522353 RAET1GQ6H3X3 334 aa16.51■□□□□ 0.23
PCDHA3-201ENST00000522353 PTF1AQ7RTS3 328 aa16.51■□□□□ 0.23
PCDHA3-201ENST00000522353 MAGED4Q96JG8 741 aa16.51■□□□□ 0.23
PCDHA3-201ENST00000522353 HSD17B14Q9BPX1 270 aa16.51■□□□□ 0.23
PCDHA3-201ENST00000522353 OXCT2Q9BYC2 517 aaPredicted RBP16.51■□□□□ 0.23
PCDHA3-201ENST00000522353 MIR1-1HGQ9H1L0 117 aa16.51■□□□□ 0.23
PCDHA3-201ENST00000522353 DMGDHQ9UI17 866 aaKnown RBP16.51■□□□□ 0.23
PCDHA3-201ENST00000522353 SEC22BO75396 215 aa16.51■□□□□ 0.23
PCDHA3-201ENST00000522353 RARAP10276 462 aa16.51■□□□□ 0.23
PCDHA3-201ENST00000522353 H2AFXP16104 143 aaPredicted RBP16.51■□□□□ 0.23
PCDHA3-201ENST00000522353 PECAM1P16284 738 aaPredicted RBP16.51■□□□□ 0.23
PCDHA3-201ENST00000522353 TKTP29401 623 aaKnown RBP16.51■□□□□ 0.23
PCDHA3-201ENST00000522353 PKN2Q16513 984 aaKnown RBP16.51■□□□□ 0.23
PCDHA3-201ENST00000522353 AGKQ53H12 422 aa16.51■□□□□ 0.23
PCDHA3-201ENST00000522353 MIER2Q8N344 545 aa16.51■□□□□ 0.23
PCDHA3-201ENST00000522353 MID1IP1Q9NPA3 183 aa16.51■□□□□ 0.23
PCDHA3-201ENST00000522353 TAGLN3Q9UI15 199 aa16.51■□□□□ 0.23
PCDHA3-201ENST00000522353 A8MX80 341 aa16.51■□□□□ 0.23
PCDHA3-201ENST00000522353 GABRR2P28476 465 aa16.51■□□□□ 0.23
PCDHA3-201ENST00000522353 KCNMA1Q12791 1236 aa16.51■□□□□ 0.23
PCDHA3-201ENST00000522353 GPSM1Q86YR5 675 aa16.51■□□□□ 0.23
PCDHA3-201ENST00000522353 MCCC1Q96RQ3 725 aaPredicted RBP16.51■□□□□ 0.23
PCDHA3-201ENST00000522353 SEZ6LQ9BYH1 1024 aa16.51■□□□□ 0.23
PCDHA3-201ENST00000522353 CAAP1Q9H8G2 361 aa16.51■□□□□ 0.23
PCDHA3-201ENST00000522353 COL3A1P02461 1466 aaPredicted RBP16.51■□□□□ 0.23
PCDHA3-201ENST00000522353 ANXA5P08758 320 aa16.5■□□□□ 0.23
PCDHA3-201ENST00000522353 CNPP09543 421 aaKnown RBP16.5■□□□□ 0.23
PCDHA3-201ENST00000522353 TLX1P31314 330 aaPredicted RBP16.5■□□□□ 0.23
PCDHA3-201ENST00000522353 PRKCIP41743 596 aa16.5■□□□□ 0.23
PCDHA3-201ENST00000522353 SULT2A1Q06520 285 aa16.5■□□□□ 0.23
PCDHA3-201ENST00000522353 ZACNQ401N2 412 aa16.5■□□□□ 0.23
PCDHA3-201ENST00000522353 FAM183BPQ6ZVS7 135 aa16.5■□□□□ 0.23
PCDHA3-201ENST00000522353 NKAPQ8N5F7 415 aaKnown RBP16.5■□□□□ 0.23
PCDHA3-201ENST00000522353 FNDC5Q8NAU1 212 aa16.5■□□□□ 0.23
PCDHA3-201ENST00000522353 FBXO22Q8NEZ5 403 aa16.5■□□□□ 0.23
PCDHA3-201ENST00000522353 RAD21L1Q9H4I0 556 aa16.5■□□□□ 0.23
PCDHA3-201ENST00000522353 BRD9Q9H8M2 597 aa16.5■□□□□ 0.23
PCDHA3-201ENST00000522353 TCF7L2Q9NQB0 619 aa16.5■□□□□ 0.23
PCDHA3-201ENST00000522353 SOHLH2Q9NX45 425 aa16.5■□□□□ 0.23
PCDHA3-201ENST00000522353 NEURL4Q96JN8 1562 aa16.5■□□□□ 0.23
PCDHA3-201ENST00000522353 PABPC1P11940 636 aaKnown RBP16.5■□□□□ 0.23
PCDHA3-201ENST00000522353 SCUBE1Q8IWY4 988 aa16.5■□□□□ 0.23
PCDHA3-201ENST00000522353 CDHR5Q9HBB8 845 aa16.5■□□□□ 0.23
PCDHA3-201ENST00000522353 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.5■□□□□ 0.23
PCDHA3-201ENST00000522353 GNPTGQ9UJJ9 305 aa16.5■□□□□ 0.23
PCDHA3-201ENST00000522353 FAM220BPB1ANY3 271 aa16.5■□□□□ 0.23
PCDHA3-201ENST00000522353 E9PBE3 544 aa16.5■□□□□ 0.23
PCDHA3-201ENST00000522353 PRR23D1E9PI22 279 aaPredicted RBP16.5■□□□□ 0.23
PCDHA3-201ENST00000522353 KLHL41O60662 606 aa16.5■□□□□ 0.23
PCDHA3-201ENST00000522353 PRR23D2P0DMB1 279 aaPredicted RBP16.5■□□□□ 0.23
PCDHA3-201ENST00000522353 FCGR1AP12314 374 aa16.5■□□□□ 0.23
PCDHA3-201ENST00000522353 ARF4P18085 180 aaPredicted RBP16.5■□□□□ 0.23
PCDHA3-201ENST00000522353 UBE3AQ05086 875 aa16.5■□□□□ 0.23
PCDHA3-201ENST00000522353 MSLNQ13421 630 aaPredicted RBP16.5■□□□□ 0.23
PCDHA3-201ENST00000522353 C15orf59Q2T9L4 293 aaPredicted RBP16.5■□□□□ 0.23
PCDHA3-201ENST00000522353 ATAT1Q5SQI0 421 aa16.5■□□□□ 0.23
PCDHA3-201ENST00000522353 NOL9Q5SY16 702 aaKnown RBP16.5■□□□□ 0.23
PCDHA3-201ENST00000522353 ELMO1Q92556 727 aa16.5■□□□□ 0.23
PCDHA3-201ENST00000522353 TM6SF2Q9BZW4 377 aa16.5■□□□□ 0.23
PCDHA3-201ENST00000522353 TBC1D14Q9P2M4 693 aa16.5■□□□□ 0.23
PCDHA3-201ENST00000522353 ASTN2O75129 1339 aaPredicted RBP16.5■□□□□ 0.23
PCDHA3-201ENST00000522353 POU1F1P28069 291 aa16.5■□□□□ 0.23
PCDHA3-201ENST00000522353 MARSP56192 900 aaKnown RBP16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms