RNA–Protein interactions for RNA: ENST00000516956.1

SCARNA16.4-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 187 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.4-201ENST00000516956 DCAF4L2Q8NA75 395 aa5.58□□□□□ -1.52
SCARNA16.4-201ENST00000516956 GANCQ8TET4 914 aa5.58□□□□□ -1.52
SCARNA16.4-201ENST00000516956 CASKIN2Q8WXE0 1202 aa5.58□□□□□ -1.52
SCARNA16.4-201ENST00000516956 ATRIPQ8WXE1 791 aa5.58□□□□□ -1.52
SCARNA16.4-201ENST00000516956 RAPGEF5Q92565 580 aa5.58□□□□□ -1.52
SCARNA16.4-201ENST00000516956 KRT35Q92764 455 aa5.58□□□□□ -1.52
SCARNA16.4-201ENST00000516956 CHFRQ96EP1 664 aa5.58□□□□□ -1.52
SCARNA16.4-201ENST00000516956 HES6Q96HZ4 224 aa5.58□□□□□ -1.52
SCARNA16.4-201ENST00000516956 CELF6Q96J87 481 aaKnown RBP5.58□□□□□ -1.52
SCARNA16.4-201ENST00000516956 PRICKLE1Q96MT3 831 aaPredicted RBP5.58□□□□□ -1.52
SCARNA16.4-201ENST00000516956 PSMB7Q99436 277 aa5.58□□□□□ -1.52
SCARNA16.4-201ENST00000516956 FEM1AQ9BSK4 669 aa5.58□□□□□ -1.52
SCARNA16.4-201ENST00000516956 CINPQ9BW66 212 aaPredicted RBP5.58□□□□□ -1.52
SCARNA16.4-201ENST00000516956 OSBPL8Q9BZF1 889 aa5.58□□□□□ -1.52
SCARNA16.4-201ENST00000516956 OSBPL6Q9BZF3 934 aa5.58□□□□□ -1.52
SCARNA16.4-201ENST00000516956 BRD8Q9H0E9 1235 aa5.58□□□□□ -1.52
SCARNA16.4-201ENST00000516956 CARD9Q9H257 536 aa5.58□□□□□ -1.52
SCARNA16.4-201ENST00000516956 POLMQ9NP87 494 aaPredicted RBP5.58□□□□□ -1.52
SCARNA16.4-201ENST00000516956 LTB4R2Q9NPC1 389 aa5.58□□□□□ -1.52
SCARNA16.4-201ENST00000516956 CD320Q9NPF0 282 aa5.58□□□□□ -1.52
SCARNA16.4-201ENST00000516956 ANLNQ9NQW6 1124 aa5.58□□□□□ -1.52
SCARNA16.4-201ENST00000516956 HOMER3Q9NSC5 361 aa5.58□□□□□ -1.52
SCARNA16.4-201ENST00000516956 SEPT10Q9P0V9 454 aa5.58□□□□□ -1.52
SCARNA16.4-201ENST00000516956 BCCIPQ9P287 314 aaKnown RBP eCLIP5.58□□□□□ -1.52
SCARNA16.4-201ENST00000516956 UBA2Q9UBT2 640 aaPredicted RBP5.58□□□□□ -1.52
SCARNA16.4-201ENST00000516956 EFR3BQ9Y2G0 817 aa5.58□□□□□ -1.52
SCARNA16.4-201ENST00000516956 TBC1D30Q9Y2I9 924 aa5.58□□□□□ -1.52
SCARNA16.4-201ENST00000516956 LAMA3Q16787 3333 aa5.58□□□□□ -1.52
SCARNA16.4-201ENST00000516956 NOTCH4Q99466 2003 aa5.58□□□□□ -1.52
SCARNA16.4-201ENST00000516956 HELZP42694 1942 aaKnown RBP5.58□□□□□ -1.52
SCARNA16.4-201ENST00000516956 ANAPC1Q9H1A4 1944 aa5.58□□□□□ -1.52
SCARNA16.4-201ENST00000516956 OBSL1O75147 1896 aa5.58□□□□□ -1.52
SCARNA16.4-201ENST00000516956 DENND4CQ5VZ89 1909 aa5.57□□□□□ -1.52
SCARNA16.4-201ENST00000516956 hCG_1818297A0A087WSY0 165 aa5.57□□□□□ -1.52
SCARNA16.4-201ENST00000516956 KRBA1A5PL33 1030 aa5.57□□□□□ -1.52
SCARNA16.4-201ENST00000516956 OTOL1A6NHN0 477 aaPredicted RBP5.57□□□□□ -1.52
SCARNA16.4-201ENST00000516956 ENC1O14682 589 aa5.57□□□□□ -1.52
SCARNA16.4-201ENST00000516956 LAMTOR5O43504 91 aa5.57□□□□□ -1.52
SCARNA16.4-201ENST00000516956 KDELR3O43731 214 aa5.57□□□□□ -1.52
SCARNA16.4-201ENST00000516956 RNF40O75150 1001 aa5.57□□□□□ -1.52
SCARNA16.4-201ENST00000516956 KLF8O95600 359 aaPredicted RBP5.57□□□□□ -1.52
SCARNA16.4-201ENST00000516956 EGFP01133 1207 aa5.57□□□□□ -1.52
SCARNA16.4-201ENST00000516956 EPHX1P07099 455 aa5.57□□□□□ -1.52
SCARNA16.4-201ENST00000516956 CD48P09326 243 aa5.57□□□□□ -1.52
SCARNA16.4-201ENST00000516956 CISD3P0C7P0 127 aa5.57□□□□□ -1.52
SCARNA16.4-201ENST00000516956 PYGMP11217 842 aa5.57□□□□□ -1.52
SCARNA16.4-201ENST00000516956 ACADMP11310 421 aa5.57□□□□□ -1.52
SCARNA16.4-201ENST00000516956 KRT10P13645 584 aa5.57□□□□□ -1.52
SCARNA16.4-201ENST00000516956 CA4P22748 312 aa5.57□□□□□ -1.52
SCARNA16.4-201ENST00000516956 XPAP23025 273 aaPredicted RBP5.57□□□□□ -1.52
SCARNA16.4-201ENST00000516956 MZF1P28698 734 aaPredicted RBP5.57□□□□□ -1.52
SCARNA16.4-201ENST00000516956 HLA-FP30511 346 aa5.57□□□□□ -1.52
SCARNA16.4-201ENST00000516956 NTSR1P30989 418 aa5.57□□□□□ -1.52
SCARNA16.4-201ENST00000516956 HOXC13P31276 330 aa5.57□□□□□ -1.52
SCARNA16.4-201ENST00000516956 WASP42768 502 aa5.57□□□□□ -1.52
SCARNA16.4-201ENST00000516956 CDKN2BP42772 138 aa5.57□□□□□ -1.52
SCARNA16.4-201ENST00000516956 MARCKSL1P49006 195 aa5.57□□□□□ -1.52
SCARNA16.4-201ENST00000516956 NUMBP49757 651 aa5.57□□□□□ -1.52
SCARNA16.4-201ENST00000516956 PAPOLAP51003 745 aaKnown RBP5.57□□□□□ -1.52
SCARNA16.4-201ENST00000516956 CLCN5P51795 746 aa5.57□□□□□ -1.52
SCARNA16.4-201ENST00000516956 CLCN6P51797 869 aa5.57□□□□□ -1.52
SCARNA16.4-201ENST00000516956 PLK1P53350 603 aa5.57□□□□□ -1.52
SCARNA16.4-201ENST00000516956 RHOAP61586 193 aa5.57□□□□□ -1.52
SCARNA16.4-201ENST00000516956 SNRPD1P62314 119 aaKnown RBP5.57□□□□□ -1.52
SCARNA16.4-201ENST00000516956 LMNB2Q03252 620 aa5.57□□□□□ -1.52
SCARNA16.4-201ENST00000516956 IL10RBQ08334 325 aa5.57□□□□□ -1.52
SCARNA16.4-201ENST00000516956 CCDC15Q0P6D6 951 aa5.57□□□□□ -1.52
SCARNA16.4-201ENST00000516956 AP1B1Q10567 949 aa5.57□□□□□ -1.52
SCARNA16.4-201ENST00000516956 SEMA3BQ13214 749 aa5.57□□□□□ -1.52
SCARNA16.4-201ENST00000516956 SERINC3Q13530 473 aa5.57□□□□□ -1.52
SCARNA16.4-201ENST00000516956 DPYSQ14117 519 aa5.57□□□□□ -1.52
SCARNA16.4-201ENST00000516956 RFTN1Q14699 578 aaPredicted RBP5.57□□□□□ -1.52
SCARNA16.4-201ENST00000516956 PAFAH1B3Q15102 231 aaKnown RBP5.57□□□□□ -1.52
SCARNA16.4-201ENST00000516956 GEN1Q17RS7 908 aa5.57□□□□□ -1.52
SCARNA16.4-201ENST00000516956 FSCBQ5H9T9 825 aa5.57□□□□□ -1.52
SCARNA16.4-201ENST00000516956 TMEM196Q5HYL7 178 aa5.57□□□□□ -1.52
SCARNA16.4-201ENST00000516956 MANEALQ5VSG8 457 aa5.57□□□□□ -1.52
SCARNA16.4-201ENST00000516956 MARC1Q5VT66 337 aa5.57□□□□□ -1.52
SCARNA16.4-201ENST00000516956 ASTLQ6HA08 431 aaPredicted RBP5.57□□□□□ -1.52
SCARNA16.4-201ENST00000516956 FSTL4Q6MZW2 842 aa5.57□□□□□ -1.52
SCARNA16.4-201ENST00000516956 CXorf57Q6NSI4 855 aaKnown RBP5.57□□□□□ -1.52
SCARNA16.4-201ENST00000516956 DARS2Q6PI48 645 aaKnown RBP5.57□□□□□ -1.52
SCARNA16.4-201ENST00000516956 TXNDC11Q6PKC3 985 aa5.57□□□□□ -1.52
SCARNA16.4-201ENST00000516956 GSTA5Q7RTV2 222 aa5.57□□□□□ -1.52
SCARNA16.4-201ENST00000516956 ADAT2Q7Z6V5 191 aaKnown RBP5.57□□□□□ -1.52
SCARNA16.4-201ENST00000516956 C12orf40Q86WS4 652 aa5.57□□□□□ -1.52
SCARNA16.4-201ENST00000516956 CPNE8Q86YQ8 564 aa5.57□□□□□ -1.52
SCARNA16.4-201ENST00000516956 CDKL3Q8IVW4 592 aaPredicted RBP5.57□□□□□ -1.52
SCARNA16.4-201ENST00000516956 ETFBKMTQ8IXQ9 262 aa5.57□□□□□ -1.52
SCARNA16.4-201ENST00000516956 APCDD1Q8J025 514 aa5.57□□□□□ -1.52
SCARNA16.4-201ENST00000516956 CCDC33Q8N5R6 958 aa5.57□□□□□ -1.52
SCARNA16.4-201ENST00000516956 DDX51Q8N8A6 666 aaKnown RBP eCLIP5.57□□□□□ -1.52
SCARNA16.4-201ENST00000516956 PJA1Q8NG27 643 aa5.57□□□□□ -1.52
SCARNA16.4-201ENST00000516956 OR7D4Q8NG98 312 aa5.57□□□□□ -1.52
SCARNA16.4-201ENST00000516956 RPLP0P6Q8NHW5 317 aa5.57□□□□□ -1.52
SCARNA16.4-201ENST00000516956 PCDH19Q8TAB3 1148 aa5.57□□□□□ -1.52
SCARNA16.4-201ENST00000516956 CYB5D2Q8WUJ1 264 aa5.57□□□□□ -1.52
SCARNA16.4-201ENST00000516956 TFB1MQ8WVM0 346 aaKnown RBP5.57□□□□□ -1.52
SCARNA16.4-201ENST00000516956 ARHGEF2Q92974 986 aaKnown RBP5.57□□□□□ -1.52
SCARNA16.4-201ENST00000516956 TTC17Q96AE7 1141 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms