RNA–Protein interactions for RNA: ENST00000512909.1

HTT-210, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 611 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-210ENST00000512909 ASNSD1Q9NWL6 643 aa4.66□□□□□ -1.66
HTT-210ENST00000512909 POLKQ9UBT6 870 aa4.66□□□□□ -1.66
HTT-210ENST00000512909 FEM1BQ9UK73 627 aa4.66□□□□□ -1.66
HTT-210ENST00000512909 GPR52Q9Y2T5 361 aa4.66□□□□□ -1.66
HTT-210ENST00000512909 LRRFIP2Q9Y608 721 aaKnown RBP4.66□□□□□ -1.66
HTT-210ENST00000512909 COL5A2P05997 1499 aaPredicted RBP4.66□□□□□ -1.66
HTT-210ENST00000512909 KAT6AQ92794 2004 aa4.65□□□□□ -1.66
HTT-210ENST00000512909 SMG6Q86US8 1419 aaKnown RBP4.65□□□□□ -1.66
HTT-210ENST00000512909 CCDC196A0A1B0GTZ2 297 aa4.65□□□□□ -1.67
HTT-210ENST00000512909 FAM90A18PA6NE21 464 aa4.65□□□□□ -1.67
HTT-210ENST00000512909 FAM90A16PA6NEW6 464 aa4.65□□□□□ -1.67
HTT-210ENST00000512909 AGAP5A6NIR3 686 aa4.65□□□□□ -1.67
HTT-210ENST00000512909 FAM90A9PA6NNJ1 464 aa4.65□□□□□ -1.67
HTT-210ENST00000512909 SLC38A8A6NNN8 435 aa4.65□□□□□ -1.67
HTT-210ENST00000512909 FAM90A5PA8MXJ8 464 aa4.65□□□□□ -1.67
HTT-210ENST00000512909 HMGB1P1B2RPK0 211 aaPredicted RBP4.65□□□□□ -1.67
HTT-210ENST00000512909 CBFA2T3O75081 653 aa4.65□□□□□ -1.67
HTT-210ENST00000512909 WDHD1O75717 1129 aaPredicted RBP4.65□□□□□ -1.67
HTT-210ENST00000512909 CD63P08962 238 aa4.65□□□□□ -1.67
HTT-210ENST00000512909 FAM90A15PP0C7V4 464 aa4.65□□□□□ -1.67
HTT-210ENST00000512909 FAM90A14PP0C7W9 464 aa4.65□□□□□ -1.67
HTT-210ENST00000512909 VEGFAP15692 232 aaPredicted RBP4.65□□□□□ -1.67
HTT-210ENST00000512909 WT1P19544 449 aaPredicted RBP4.65□□□□□ -1.67
HTT-210ENST00000512909 PAX3P23760 479 aa4.65□□□□□ -1.67
HTT-210ENST00000512909 GSTM2P28161 218 aa4.65□□□□□ -1.67
HTT-210ENST00000512909 AGTR2P50052 363 aa4.65□□□□□ -1.67
HTT-210ENST00000512909 TAS2R50P59544 299 aa4.65□□□□□ -1.67
HTT-210ENST00000512909 UBE3AQ05086 875 aa4.65□□□□□ -1.67
HTT-210ENST00000512909 KLF10Q13118 480 aa4.65□□□□□ -1.67
HTT-210ENST00000512909 FHL3Q13643 280 aa4.65□□□□□ -1.67
HTT-210ENST00000512909 LARS2Q15031 903 aaKnown RBP4.65□□□□□ -1.67
HTT-210ENST00000512909 ANXA2RQ3ZCQ2 193 aa4.65□□□□□ -1.67
HTT-210ENST00000512909 GALNTL6Q49A17 601 aa4.65□□□□□ -1.67
HTT-210ENST00000512909 PLEKHO1Q53GL0 409 aaPredicted RBP4.65□□□□□ -1.67
HTT-210ENST00000512909 PRAMEF17Q5VTA0 474 aa4.65□□□□□ -1.67
HTT-210ENST00000512909 MIS18BP1Q6P0N0 1132 aa4.65□□□□□ -1.67
HTT-210ENST00000512909 DHRS13Q6UX07 377 aa4.65□□□□□ -1.67
HTT-210ENST00000512909 RANBP10Q6VN20 620 aa4.65□□□□□ -1.67
HTT-210ENST00000512909 SLC39A5Q6ZMH5 540 aa4.65□□□□□ -1.67
HTT-210ENST00000512909 BCDIN3DQ7Z5W3 292 aaKnown RBP4.65□□□□□ -1.67
HTT-210ENST00000512909 SLC16A11Q8NCK7 471 aa4.65□□□□□ -1.67
HTT-210ENST00000512909 SIMC1Q8NDZ2 872 aa4.65□□□□□ -1.67
HTT-210ENST00000512909 OR1N1Q8NGS0 311 aa4.65□□□□□ -1.67
HTT-210ENST00000512909 KCNJ9Q92806 393 aa4.65□□□□□ -1.67
HTT-210ENST00000512909 SARAFQ96BY9 339 aa4.65□□□□□ -1.67
HTT-210ENST00000512909 MCRS1Q96EZ8 462 aa4.65□□□□□ -1.67
HTT-210ENST00000512909 PRR11Q96HE9 360 aaPredicted RBP4.65□□□□□ -1.67
HTT-210ENST00000512909 ASB2Q96Q27 587 aa4.65□□□□□ -1.67
HTT-210ENST00000512909 MACROD1Q9BQ69 325 aa4.65□□□□□ -1.67
HTT-210ENST00000512909 THAP7Q9BT49 309 aaPredicted RBP4.65□□□□□ -1.67
HTT-210ENST00000512909 MECRQ9BV79 373 aa4.65□□□□□ -1.67
HTT-210ENST00000512909 C9orf78Q9NZ63 289 aaPredicted RBP4.65□□□□□ -1.67
HTT-210ENST00000512909 PI4KBQ9UBF8 816 aa4.65□□□□□ -1.67
HTT-210ENST00000512909 ANAPC4Q9UJX5 808 aa4.65□□□□□ -1.67
HTT-210ENST00000512909 DMRT1Q9Y5R6 373 aa4.65□□□□□ -1.67
HTT-210ENST00000512909 SIRT4Q9Y6E7 314 aaPredicted RBP4.65□□□□□ -1.67
HTT-210ENST00000512909 ITSN1Q15811 1721 aa4.65□□□□□ -1.67
HTT-210ENST00000512909 TRPM3Q9HCF6 1732 aaPredicted RBP4.65□□□□□ -1.67
HTT-210ENST00000512909 ALS2Q96Q42 1657 aa4.64□□□□□ -1.67
HTT-210ENST00000512909 GXYLT2A0PJZ3 443 aa4.64□□□□□ -1.67
HTT-210ENST00000512909 SAC3D1A6NKF1 404 aa4.64□□□□□ -1.67
HTT-210ENST00000512909 M0QYT0 321 aa4.64□□□□□ -1.67
HTT-210ENST00000512909 SYN3O14994 580 aa4.64□□□□□ -1.67
HTT-210ENST00000512909 FAM155BO75949 473 aa4.64□□□□□ -1.67
HTT-210ENST00000512909 ENO1P06733 434 aaKnown RBP4.64□□□□□ -1.67
HTT-210ENST00000512909 HMOX1P09601 288 aa4.64□□□□□ -1.67
HTT-210ENST00000512909 WEE2P0C1S8 567 aa4.64□□□□□ -1.67
HTT-210ENST00000512909 APEHP13798 732 aaKnown RBP4.64□□□□□ -1.67
HTT-210ENST00000512909 BMP5P22003 454 aa4.64□□□□□ -1.67
HTT-210ENST00000512909 ALKBH1Q13686 389 aaKnown RBP4.64□□□□□ -1.67
HTT-210ENST00000512909 KPNB1Q14974 876 aaKnown RBP4.64□□□□□ -1.67
HTT-210ENST00000512909 SMAD1Q15797 465 aaKnown RBP4.64□□□□□ -1.67
HTT-210ENST00000512909 SLC15A2Q16348 729 aa4.64□□□□□ -1.67
HTT-210ENST00000512909 C1orf141Q5JVX7 400 aa4.64□□□□□ -1.67
HTT-210ENST00000512909 ANO7Q6IWH7 933 aa4.64□□□□□ -1.67
HTT-210ENST00000512909 C16orf89Q6UX73 402 aa4.64□□□□□ -1.67
HTT-210ENST00000512909 LDLRAD3Q86YD5 345 aa4.64□□□□□ -1.67
HTT-210ENST00000512909 BOLLQ8N9W6 283 aaKnown RBP4.64□□□□□ -1.67
HTT-210ENST00000512909 USP38Q8NB14 1042 aa4.64□□□□□ -1.67
HTT-210ENST00000512909 PIGKQ92643 395 aa4.64□□□□□ -1.67
HTT-210ENST00000512909 STAMQ92783 540 aa4.64□□□□□ -1.67
HTT-210ENST00000512909 ARRDC3Q96B67 414 aa4.64□□□□□ -1.67
HTT-210ENST00000512909 CHFRQ96EP1 664 aa4.64□□□□□ -1.67
HTT-210ENST00000512909 ZHX3Q9H4I2 956 aa4.64□□□□□ -1.67
HTT-210ENST00000512909 KCNK9Q9NPC2 374 aa4.64□□□□□ -1.67
HTT-210ENST00000512909 G6PC2Q9NQR9 355 aa4.64□□□□□ -1.67
HTT-210ENST00000512909 SLC13A4Q9UKG4 626 aa4.64□□□□□ -1.67
HTT-210ENST00000512909 KIF7Q2M1P5 1343 aa4.64□□□□□ -1.67
HTT-210ENST00000512909 PLCH1Q4KWH8 1693 aa4.64□□□□□ -1.67
HTT-210ENST00000512909 OVOS2A0A0G2JMS6 1433 aa4.63□□□□□ -1.67
HTT-210ENST00000512909 OVOS2A0A0J9YW53 1432 aa4.63□□□□□ -1.67
HTT-210ENST00000512909 OVOS2Q6IE36 1432 aa4.63□□□□□ -1.67
HTT-210ENST00000512909 MARF1Q9Y4F3 1742 aaKnown RBP4.63□□□□□ -1.67
HTT-210ENST00000512909 CD163L1Q9NR16 1453 aa4.63□□□□□ -1.67
HTT-210ENST00000512909 LOC105369274A0A096LPK9 316 aa4.63□□□□□ -1.67
HTT-210ENST00000512909 LOC102723532A0A0G2JNH3 316 aa4.63□□□□□ -1.67
HTT-210ENST00000512909 DPPA5A6NC42 116 aa4.63□□□□□ -1.67
HTT-210ENST00000512909 DSCR3O14972 297 aa4.63□□□□□ -1.67
HTT-210ENST00000512909 NCAM2O15394 837 aa4.63□□□□□ -1.67
HTT-210ENST00000512909 PPFIA2O75334 1257 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms