RNA–Protein interactions for RNA: ENST00000512756.5

COL11A1-210, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL11A1, Length 5,442 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-210ENST00000512756 TMEM161BQ8NDZ6 487 aa12.68□□□□□ -0.38
COL11A1-210ENST00000512756 UTP15Q8TED0 518 aaKnown RBP12.68□□□□□ -0.38
COL11A1-210ENST00000512756 C19orf60Q96EN9 201 aa12.68□□□□□ -0.38
COL11A1-210ENST00000512756 MRPS26Q9BYN8 205 aaKnown RBP12.68□□□□□ -0.38
COL11A1-210ENST00000512756 PHACTR1Q9C0D0 580 aa12.68□□□□□ -0.38
COL11A1-210ENST00000512756 ROGDIQ9GZN7 287 aa12.68□□□□□ -0.38
COL11A1-210ENST00000512756 RAD21L1Q9H4I0 556 aa12.68□□□□□ -0.38
COL11A1-210ENST00000512756 PIH1D1Q9NWS0 290 aaKnown RBP12.68□□□□□ -0.38
COL11A1-210ENST00000512756 RPS6KB2Q9UBS0 482 aa12.68□□□□□ -0.38
COL11A1-210ENST00000512756 DPP7Q9UHL4 492 aa12.68□□□□□ -0.38
COL11A1-210ENST00000512756 PNMA8CA0A1B0GUJ8 204 aa12.68□□□□□ -0.38
COL11A1-210ENST00000512756 BTN3A1O00481 513 aa12.68□□□□□ -0.38
COL11A1-210ENST00000512756 PBLDP30039 288 aaPredicted RBP12.68□□□□□ -0.38
COL11A1-210ENST00000512756 HK2P52789 917 aa12.68□□□□□ -0.38
COL11A1-210ENST00000512756 PHKG1Q16816 387 aa12.68□□□□□ -0.38
COL11A1-210ENST00000512756 ZCCHC8Q6NZY4 707 aaKnown RBP12.68□□□□□ -0.38
COL11A1-210ENST00000512756 CAMK1DQ8IU85 385 aa12.68□□□□□ -0.38
COL11A1-210ENST00000512756 CLVS1Q8IUQ0 354 aaPredicted RBP12.68□□□□□ -0.38
COL11A1-210ENST00000512756 CDK20Q8IZL9 346 aa12.68□□□□□ -0.38
COL11A1-210ENST00000512756 C19orf18Q8NEA5 215 aa12.68□□□□□ -0.38
COL11A1-210ENST00000512756 GLIS3Q8NEA6 775 aa12.68□□□□□ -0.38
COL11A1-210ENST00000512756 ITFG1Q8TB96 612 aa12.68□□□□□ -0.38
COL11A1-210ENST00000512756 ELMO3Q96BJ8 720 aa12.68□□□□□ -0.38
COL11A1-210ENST00000512756 RNF157Q96PX1 679 aa12.68□□□□□ -0.38
COL11A1-210ENST00000512756 OSBPL10Q9BXB5 764 aa12.68□□□□□ -0.38
COL11A1-210ENST00000512756 UBA2Q9UBT2 640 aaPredicted RBP12.68□□□□□ -0.38
COL11A1-210ENST00000512756 PLA2G4CQ9UP65 541 aa12.68□□□□□ -0.38
COL11A1-210ENST00000512756 KIDINS220Q9ULH0 1771 aa12.68□□□□□ -0.38
COL11A1-210ENST00000512756 MEIS2O14770 477 aa12.68□□□□□ -0.38
COL11A1-210ENST00000512756 EPHB6O15197 1021 aa12.68□□□□□ -0.38
COL11A1-210ENST00000512756 ADRB2P07550 413 aa12.68□□□□□ -0.38
COL11A1-210ENST00000512756 LTA4HP09960 611 aaKnown RBP12.68□□□□□ -0.38
COL11A1-210ENST00000512756 FMO1Q01740 532 aa12.68□□□□□ -0.38
COL11A1-210ENST00000512756 USP39Q53GS9 565 aaKnown RBP12.68□□□□□ -0.38
COL11A1-210ENST00000512756 OR8H2Q8N162 312 aa12.68□□□□□ -0.38
COL11A1-210ENST00000512756 ULBP1Q9BZM6 244 aa12.68□□□□□ -0.38
COL11A1-210ENST00000512756 IPPQ9Y573 584 aa12.68□□□□□ -0.38
COL11A1-210ENST00000512756 UBIAD1Q9Y5Z9 338 aa12.68□□□□□ -0.38
COL11A1-210ENST00000512756 TISP43B9A030 160 aa12.68□□□□□ -0.38
COL11A1-210ENST00000512756 TK2O00142 265 aa12.68□□□□□ -0.38
COL11A1-210ENST00000512756 WNT10BO00744 389 aa12.68□□□□□ -0.38
COL11A1-210ENST00000512756 TRUB2O95900 331 aaKnown RBP12.68□□□□□ -0.38
COL11A1-210ENST00000512756 STARD3Q14849 445 aa12.68□□□□□ -0.38
COL11A1-210ENST00000512756 ANGPT1Q15389 498 aa12.68□□□□□ -0.38
COL11A1-210ENST00000512756 TRIM71Q2Q1W2 868 aaKnown RBP12.68□□□□□ -0.38
COL11A1-210ENST00000512756 AADACL2Q6P093 401 aa12.68□□□□□ -0.38
COL11A1-210ENST00000512756 CYP2R1Q6VVX0 501 aa12.68□□□□□ -0.38
COL11A1-210ENST00000512756 RNF148Q8N7C7 305 aa12.68□□□□□ -0.38
COL11A1-210ENST00000512756 STAG3L4Q8TBR4 150 aa12.68□□□□□ -0.38
COL11A1-210ENST00000512756 CERS2Q96G23 380 aa12.68□□□□□ -0.38
COL11A1-210ENST00000512756 HGH1Q9BTY7 390 aa12.68□□□□□ -0.38
COL11A1-210ENST00000512756 GBA2Q9HCG7 927 aaPredicted RBP12.68□□□□□ -0.38
COL11A1-210ENST00000512756 ERVK-10P10266 1014 aa12.67□□□□□ -0.38
COL11A1-210ENST00000512756 MARSP56192 900 aaKnown RBP12.67□□□□□ -0.38
COL11A1-210ENST00000512756 PLD1Q13393 1074 aa12.67□□□□□ -0.38
COL11A1-210ENST00000512756 PCBP1Q15365 356 aaKnown RBP eCLIP12.67□□□□□ -0.38
COL11A1-210ENST00000512756 ARMC4Q5T2S8 1044 aa12.67□□□□□ -0.38
COL11A1-210ENST00000512756 CASP12Q6UXS9 341 aa12.67□□□□□ -0.38
COL11A1-210ENST00000512756 FGD2Q7Z6J4 655 aa12.67□□□□□ -0.38
COL11A1-210ENST00000512756 LRRC49Q8IUZ0 686 aa12.67□□□□□ -0.38
COL11A1-210ENST00000512756 DPP10Q8N608 796 aa12.67□□□□□ -0.38
COL11A1-210ENST00000512756 TRAPPC12Q8WVT3 735 aa12.67□□□□□ -0.38
COL11A1-210ENST00000512756 TRPC4Q9UBN4 977 aa12.67□□□□□ -0.38
COL11A1-210ENST00000512756 RCCD1A6NED2 376 aa12.67□□□□□ -0.38
COL11A1-210ENST00000512756 HS6ST1O60243 411 aa12.67□□□□□ -0.38
COL11A1-210ENST00000512756 IGSF6O95976 241 aa12.67□□□□□ -0.38
COL11A1-210ENST00000512756 LRPAP1P30533 357 aa12.67□□□□□ -0.38
COL11A1-210ENST00000512756 S100A3P33764 101 aa12.67□□□□□ -0.38
COL11A1-210ENST00000512756 INAQ16352 499 aa12.67□□□□□ -0.38
COL11A1-210ENST00000512756 ZNF438Q7Z4V0 828 aa12.67□□□□□ -0.38
COL11A1-210ENST00000512756 GPSM1Q86YR5 675 aa12.67□□□□□ -0.38
COL11A1-210ENST00000512756 PHACTR4Q8IZ21 702 aa12.67□□□□□ -0.38
COL11A1-210ENST00000512756 ADAM32Q8TC27 787 aa12.67□□□□□ -0.38
COL11A1-210ENST00000512756 TRPC4APQ8TEL6 797 aa12.67□□□□□ -0.38
COL11A1-210ENST00000512756 INPP4AQ96PE3 977 aaPredicted RBP12.67□□□□□ -0.38
COL11A1-210ENST00000512756 ZNF670Q9BS34 389 aa12.67□□□□□ -0.38
COL11A1-210ENST00000512756 ACSS3Q9H6R3 686 aa12.67□□□□□ -0.38
COL11A1-210ENST00000512756 ANAPC2Q9UJX6 822 aa12.67□□□□□ -0.38
COL11A1-210ENST00000512756 DYTNA2CJ06 578 aa12.67□□□□□ -0.38
COL11A1-210ENST00000512756 OPLAHO14841 1288 aa12.67□□□□□ -0.38
COL11A1-210ENST00000512756 BIRC5O15392 142 aa12.67□□□□□ -0.38
COL11A1-210ENST00000512756 RECQL5O94762 991 aaPredicted RBP12.67□□□□□ -0.38
COL11A1-210ENST00000512756 CCDC130P13994 396 aa12.67□□□□□ -0.38
COL11A1-210ENST00000512756 GLRA2P23416 452 aa12.67□□□□□ -0.38
COL11A1-210ENST00000512756 ATP5F1P24539 256 aaPredicted RBP12.67□□□□□ -0.38
COL11A1-210ENST00000512756 PTPN3P26045 913 aa12.67□□□□□ -0.38
COL11A1-210ENST00000512756 RTP1P59025 263 aa12.67□□□□□ -0.38
COL11A1-210ENST00000512756 IL2P60568 153 aa12.67□□□□□ -0.38
COL11A1-210ENST00000512756 AMPD2Q01433 879 aa12.67□□□□□ -0.38
COL11A1-210ENST00000512756 DGUOKQ16854 277 aa12.67□□□□□ -0.38
COL11A1-210ENST00000512756 IQSEC1Q6DN90 963 aa12.67□□□□□ -0.38
COL11A1-210ENST00000512756 C16orf46Q6P387 395 aa12.67□□□□□ -0.38
COL11A1-210ENST00000512756 NKAPQ8N5F7 415 aaKnown RBP12.67□□□□□ -0.38
COL11A1-210ENST00000512756 SPATA20Q8TB22 786 aa12.67□□□□□ -0.38
COL11A1-210ENST00000512756 P2RX7Q99572 595 aaKnown RBP12.67□□□□□ -0.38
COL11A1-210ENST00000512756 CIPCQ9C0C6 399 aa12.67□□□□□ -0.38
COL11A1-210ENST00000512756 PAIP1Q9H074 479 aaKnown RBP12.67□□□□□ -0.38
COL11A1-210ENST00000512756 SYNDIG1Q9H7V2 258 aa12.67□□□□□ -0.38
COL11A1-210ENST00000512756 BTBD7Q9P203 1132 aa12.67□□□□□ -0.38
COL11A1-210ENST00000512756 OPTCQ9UBM4 332 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms