RNA–Protein interactions for RNA: ENST00000509774.5

PTPN20-222, Transcript of protein tyrosine phosphatase, non-receptor type 20, human

TSL 1 (best) BASIC

Gene PTPN20, Length 788 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN20-222	ENST00000509774	SELENOO	Q9BVL4	669 aa		10.64	□□□□□ -0.71
PTPN20-222	ENST00000509774	ECT2	Q9H8V3	914 aa		10.64	□□□□□ -0.71
PTPN20-222	ENST00000509774	NHEJ1	Q9H9Q4	299 aa	Predicted RBP	10.64	□□□□□ -0.71
PTPN20-222	ENST00000509774	GRPEL1	Q9HAV7	217 aa		10.64	□□□□□ -0.71
PTPN20-222	ENST00000509774	EVA1B	Q9NVM1	165 aa		10.64	□□□□□ -0.71
PTPN20-222	ENST00000509774	SFMBT1	Q9UHJ3	866 aa		10.64	□□□□□ -0.71
PTPN20-222	ENST00000509774	LCMT1	Q9UIC8	334 aa		10.64	□□□□□ -0.71
PTPN20-222	ENST00000509774	NUDT5	Q9UKK9	219 aa		10.64	□□□□□ -0.71
PTPN20-222	ENST00000509774	INTU	Q9ULD6	942 aa		10.64	□□□□□ -0.71
PTPN20-222	ENST00000509774	DOPEY1	Q5JWR5	2465 aa		10.64	□□□□□ -0.71
PTPN20-222	ENST00000509774	TCRBV5S1A1T	A0A578	114 aa		10.63	□□□□□ -0.71
PTPN20-222	ENST00000509774	C2CD4B	A6NLJ0	364 aa		10.63	□□□□□ -0.71
PTPN20-222	ENST00000509774	IRAK2	O43187	625 aa		10.63	□□□□□ -0.71
PTPN20-222	ENST00000509774	ADH1C	P00326	375 aa		10.63	□□□□□ -0.71
PTPN20-222	ENST00000509774	PLEK	P08567	350 aa	Predicted RBP	10.63	□□□□□ -0.71
PTPN20-222	ENST00000509774	PDGFRA	P16234	1089 aa		10.63	□□□□□ -0.71
PTPN20-222	ENST00000509774	SDC4	P31431	198 aa		10.63	□□□□□ -0.71
PTPN20-222	ENST00000509774	EIF2D	P41214	584 aa	Known RBP	10.63	□□□□□ -0.71
PTPN20-222	ENST00000509774	RNASE9	P60153	205 aa	Known RBP	10.63	□□□□□ -0.71
PTPN20-222	ENST00000509774	GRSF1	Q12849	480 aa	Known RBP eCLIP	10.63	□□□□□ -0.71
PTPN20-222	ENST00000509774	MAMLD1	Q13495	774 aa		10.63	□□□□□ -0.71
PTPN20-222	ENST00000509774	DMC1	Q14565	340 aa		10.63	□□□□□ -0.71
PTPN20-222	ENST00000509774	USP39	Q53GS9	565 aa	Known RBP	10.63	□□□□□ -0.71
PTPN20-222	ENST00000509774	BRMS1L	Q5PSV4	323 aa		10.63	□□□□□ -0.71
PTPN20-222	ENST00000509774	MPP7	Q5T2T1	576 aa		10.63	□□□□□ -0.71
PTPN20-222	ENST00000509774	ADGRF1	Q5T601	910 aa		10.63	□□□□□ -0.71
PTPN20-222	ENST00000509774	DNAJC24	Q6P3W2	148 aa		10.63	□□□□□ -0.71
PTPN20-222	ENST00000509774	DCUN1D2	Q6PH85	259 aa		10.63	□□□□□ -0.71
PTPN20-222	ENST00000509774	STRADA	Q7RTN6	431 aa		10.63	□□□□□ -0.71
PTPN20-222	ENST00000509774	BNIPL	Q7Z465	357 aa		10.63	□□□□□ -0.71
PTPN20-222	ENST00000509774	TRIM46	Q7Z4K8	759 aa		10.63	□□□□□ -0.71
PTPN20-222	ENST00000509774	MARCH9	Q86YJ5	346 aa		10.63	□□□□□ -0.71
PTPN20-222	ENST00000509774	SYT12	Q8IV01	421 aa		10.63	□□□□□ -0.71
PTPN20-222	ENST00000509774	FAM217A	Q8IXS0	508 aa		10.63	□□□□□ -0.71
PTPN20-222	ENST00000509774	TMEFF1	Q8IYR6	380 aa		10.63	□□□□□ -0.71
PTPN20-222	ENST00000509774	ATP6V0D2	Q8N8Y2	350 aa		10.63	□□□□□ -0.71
PTPN20-222	ENST00000509774	FNIP1	Q8TF40	1166 aa		10.63	□□□□□ -0.71
PTPN20-222	ENST00000509774	CENPI	Q92674	756 aa	Predicted RBP	10.63	□□□□□ -0.71
PTPN20-222	ENST00000509774	PIWIL1	Q96J94	861 aa	Known RBP	10.63	□□□□□ -0.71
PTPN20-222	ENST00000509774	BTN2A3P	Q96KV6	586 aa		10.63	□□□□□ -0.71
PTPN20-222	ENST00000509774	GTPBP2	Q9BX10	602 aa	Known RBP	10.63	□□□□□ -0.71
PTPN20-222	ENST00000509774	TPSD1	Q9BZJ3	242 aa		10.63	□□□□□ -0.71
PTPN20-222	ENST00000509774	LINC00597	Q9H2U6	94 aa		10.63	□□□□□ -0.71
PTPN20-222	ENST00000509774	FBRSL1	Q9HCM7	1045 aa	Known RBP	10.63	□□□□□ -0.71
PTPN20-222	ENST00000509774	LUC7L	Q9NQ29	371 aa	Known RBP	10.63	□□□□□ -0.71
PTPN20-222	ENST00000509774	DDIT4	Q9NX09	232 aa		10.63	□□□□□ -0.71
PTPN20-222	ENST00000509774	TAS2R14	Q9NYV8	317 aa		10.63	□□□□□ -0.71
PTPN20-222	ENST00000509774	NENF	Q9UMX5	172 aa		10.63	□□□□□ -0.71
PTPN20-222	ENST00000509774	ATXN2	Q99700	1313 aa	Known RBP	10.62	□□□□□ -0.71
PTPN20-222	ENST00000509774	TRABD2B	A6NFA1	517 aa		10.62	□□□□□ -0.71
PTPN20-222	ENST00000509774	TMCO5B	A8MYB1	307 aa		10.62	□□□□□ -0.71
PTPN20-222	ENST00000509774	KCNU1	A8MYU2	1149 aa		10.62	□□□□□ -0.71
PTPN20-222	ENST00000509774	GOLGA8S	H3BPF8	625 aa		10.62	□□□□□ -0.71
PTPN20-222	ENST00000509774		M0QYT0	321 aa		10.62	□□□□□ -0.71
PTPN20-222	ENST00000509774	TRDMT1	O14717	391 aa	Known RBP	10.62	□□□□□ -0.71
PTPN20-222	ENST00000509774	MDM4	O15151	490 aa		10.62	□□□□□ -0.71
PTPN20-222	ENST00000509774	SH3BP5	O60239	455 aa		10.62	□□□□□ -0.71
PTPN20-222	ENST00000509774	OPHN1	O60890	802 aa		10.62	□□□□□ -0.71
PTPN20-222	ENST00000509774	GRAP2	O75791	330 aa		10.62	□□□□□ -0.71
PTPN20-222	ENST00000509774	LCA5L	O95447	670 aa		10.62	□□□□□ -0.71
PTPN20-222	ENST00000509774	APOE	P02649	317 aa		10.62	□□□□□ -0.71
PTPN20-222	ENST00000509774	KLKB1	P03952	638 aa		10.62	□□□□□ -0.71
PTPN20-222	ENST00000509774	NTRK1	P04629	796 aa		10.62	□□□□□ -0.71
PTPN20-222	ENST00000509774	CYP1A2	P05177	515 aa		10.62	□□□□□ -0.71
PTPN20-222	ENST00000509774	H2AFZ	P0C0S5	128 aa		10.62	□□□□□ -0.71
PTPN20-222	ENST00000509774	ABCB4	P21439	1286 aa		10.62	□□□□□ -0.71
PTPN20-222	ENST00000509774	RRM1	P23921	792 aa		10.62	□□□□□ -0.71
PTPN20-222	ENST00000509774	CORO1A	P31146	461 aa	Known RBP	10.62	□□□□□ -0.71
PTPN20-222	ENST00000509774	RFC1	P35251	1148 aa	Predicted RBP	10.62	□□□□□ -0.71
PTPN20-222	ENST00000509774	CYLC1	P35663	651 aa	Predicted RBP	10.62	□□□□□ -0.71
PTPN20-222	ENST00000509774	FLT3	P36888	993 aa		10.62	□□□□□ -0.71
PTPN20-222	ENST00000509774	PTGER3	P43115	390 aa		10.62	□□□□□ -0.71
PTPN20-222	ENST00000509774	CXCR3	P49682	368 aa		10.62	□□□□□ -0.71
PTPN20-222	ENST00000509774	ZNF143	P52747	638 aa	Predicted RBP	10.62	□□□□□ -0.71
PTPN20-222	ENST00000509774	AIF1	P55008	147 aa		10.62	□□□□□ -0.71
PTPN20-222	ENST00000509774	GAD2	Q05329	585 aa		10.62	□□□□□ -0.71
PTPN20-222	ENST00000509774	DHCR24	Q15392	516 aa		10.62	□□□□□ -0.71
PTPN20-222	ENST00000509774	C2CD6	Q53TS8	623 aa		10.62	□□□□□ -0.71
PTPN20-222	ENST00000509774	RHBDF2	Q6PJF5	856 aa		10.62	□□□□□ -0.71
PTPN20-222	ENST00000509774	H2AFV	Q71UI9	128 aa		10.62	□□□□□ -0.71
PTPN20-222	ENST00000509774	ARMCX6	Q7L4S7	300 aa		10.62	□□□□□ -0.71
PTPN20-222	ENST00000509774	TMPRSS7	Q7RTY8	843 aa		10.62	□□□□□ -0.71
PTPN20-222	ENST00000509774	TAC4	Q86UU9	113 aa		10.62	□□□□□ -0.71
PTPN20-222	ENST00000509774	DENND1C	Q8IV53	801 aa		10.62	□□□□□ -0.71
PTPN20-222	ENST00000509774	ZNF557	Q8N988	423 aa	Predicted RBP	10.62	□□□□□ -0.71
PTPN20-222	ENST00000509774	RPLP0P6	Q8NHW5	317 aa		10.62	□□□□□ -0.71
PTPN20-222	ENST00000509774	CCDC26	Q8TAB7	109 aa		10.62	□□□□□ -0.71
PTPN20-222	ENST00000509774	RIN3	Q8TB24	985 aa		10.62	□□□□□ -0.71
PTPN20-222	ENST00000509774	RXFP2	Q8WXD0	754 aa		10.62	□□□□□ -0.71
PTPN20-222	ENST00000509774	ANP32B	Q92688	251 aa	Known RBP	10.62	□□□□□ -0.71
PTPN20-222	ENST00000509774	FCRL2	Q96LA5	508 aa	Predicted RBP	10.62	□□□□□ -0.71
PTPN20-222	ENST00000509774	C1orf74	Q96LT6	269 aa		10.62	□□□□□ -0.71
PTPN20-222	ENST00000509774	FCRL3	Q96P31	734 aa	Predicted RBP	10.62	□□□□□ -0.71
PTPN20-222	ENST00000509774	CHP1	Q99653	195 aa		10.62	□□□□□ -0.71
PTPN20-222	ENST00000509774	CNPY3	Q9BT09	278 aa		10.62	□□□□□ -0.71
PTPN20-222	ENST00000509774	EBF3	Q9H4W6	596 aa		10.62	□□□□□ -0.71
PTPN20-222	ENST00000509774	RETREG1	Q9H6L5	497 aa		10.62	□□□□□ -0.71
PTPN20-222	ENST00000509774	WDCP	Q9H6R7	721 aa		10.62	□□□□□ -0.71
PTPN20-222	ENST00000509774	POLM	Q9NP87	494 aa	Predicted RBP	10.62	□□□□□ -0.71
PTPN20-222	ENST00000509774	HPS4	Q9NQG7	708 aa		10.62	□□□□□ -0.71

Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms