RNA–Protein interactions for RNA: ENST00000508852.5

CCHCR1-227, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 589 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-227ENST00000508852 VPS28Q9UK41 221 aa13.99□□□□□ -0.17
CCHCR1-227ENST00000508852 KLK13Q9UKR3 277 aa13.99□□□□□ -0.17
CCHCR1-227ENST00000508852 DMTF1Q9Y222 760 aa13.99□□□□□ -0.17
CCHCR1-227ENST00000508852 CABIN1Q9Y6J0 2220 aa13.99□□□□□ -0.17
CCHCR1-227ENST00000508852 TMEM131Q92545 1883 aa13.99□□□□□ -0.17
CCHCR1-227ENST00000508852 RNGTTO60942 597 aaKnown RBP13.98□□□□□ -0.17
CCHCR1-227ENST00000508852 PAGE1O75459 146 aa13.98□□□□□ -0.17
CCHCR1-227ENST00000508852 GRAP2O75791 330 aa13.98□□□□□ -0.17
CCHCR1-227ENST00000508852 TOP3BO95985 862 aaKnown RBP13.98□□□□□ -0.17
CCHCR1-227ENST00000508852 ERBB2P04626 1255 aa13.98□□□□□ -0.17
CCHCR1-227ENST00000508852 CYP11B1P15538 503 aa13.98□□□□□ -0.17
CCHCR1-227ENST00000508852 ZNF18P17022 549 aa13.98□□□□□ -0.17
CCHCR1-227ENST00000508852 ARRB1P49407 418 aaPredicted RBP13.98□□□□□ -0.17
CCHCR1-227ENST00000508852 CXCR3P49682 368 aa13.98□□□□□ -0.17
CCHCR1-227ENST00000508852 CLCN6P51797 869 aa13.98□□□□□ -0.17
CCHCR1-227ENST00000508852 ADPRHP54922 357 aa13.98□□□□□ -0.17
CCHCR1-227ENST00000508852 DEUP1Q05D60 604 aa13.98□□□□□ -0.17
CCHCR1-227ENST00000508852 RAPGEF1Q13905 1077 aa13.98□□□□□ -0.17
CCHCR1-227ENST00000508852 KCNJ12Q14500 433 aa13.98□□□□□ -0.17
CCHCR1-227ENST00000508852 DRAP1Q14919 205 aaPredicted RBP13.98□□□□□ -0.17
CCHCR1-227ENST00000508852 SLC25A52Q3SY17 297 aa13.98□□□□□ -0.17
CCHCR1-227ENST00000508852 ACCSLQ4AC99 568 aa13.98□□□□□ -0.17
CCHCR1-227ENST00000508852 PTPN20Q4JDL3 420 aa13.98□□□□□ -0.17
CCHCR1-227ENST00000508852 C6orf118Q5T5N4 469 aa13.98□□□□□ -0.17
CCHCR1-227ENST00000508852 KLHDC7AQ5VTJ3 777 aa13.98□□□□□ -0.17
CCHCR1-227ENST00000508852 CXorf57Q6NSI4 855 aaKnown RBP13.98□□□□□ -0.17
CCHCR1-227ENST00000508852 ZNF783Q6ZMS7 281 aa13.98□□□□□ -0.17
CCHCR1-227ENST00000508852 IQCHQ86VS3 1027 aa13.98□□□□□ -0.17
CCHCR1-227ENST00000508852 STK40Q8N2I9 435 aa13.98□□□□□ -0.17
CCHCR1-227ENST00000508852 FRS2Q8WU20 508 aa13.98□□□□□ -0.17
CCHCR1-227ENST00000508852 NT5C3BQ969T7 300 aa13.98□□□□□ -0.17
CCHCR1-227ENST00000508852 NPY6RQ99463 290 aa13.98□□□□□ -0.17
CCHCR1-227ENST00000508852 STK33Q9BYT3 514 aa13.98□□□□□ -0.17
CCHCR1-227ENST00000508852 MUC3BQ9H195 1237 aa13.98□□□□□ -0.17
CCHCR1-227ENST00000508852 ERVMER34-1Q9H9K5 563 aa13.98□□□□□ -0.17
CCHCR1-227ENST00000508852 PLCB1Q9NQ66 1216 aa13.98□□□□□ -0.17
CCHCR1-227ENST00000508852 GDF3Q9NR23 364 aa13.98□□□□□ -0.17
CCHCR1-227ENST00000508852 AASDHPPTQ9NRN7 309 aa13.98□□□□□ -0.17
CCHCR1-227ENST00000508852 VANGL2Q9ULK5 521 aa13.98□□□□□ -0.17
CCHCR1-227ENST00000508852 HS3ST4Q9Y661 456 aa13.98□□□□□ -0.17
CCHCR1-227ENST00000508852 TP53BP1Q12888 1972 aaPredicted RBP13.98□□□□□ -0.17
CCHCR1-227ENST00000508852 PLXNA2O75051 1894 aa13.97□□□□□ -0.17
CCHCR1-227ENST00000508852 COL5A1P20908 1838 aaPredicted RBP13.97□□□□□ -0.17
CCHCR1-227ENST00000508852 TBC1D3DA0A087WVF3 549 aa13.97□□□□□ -0.17
CCHCR1-227ENST00000508852 TBC1D3IA0A087WXS9 549 aa13.97□□□□□ -0.17
CCHCR1-227ENST00000508852 TBC1D3EA0A087X179 549 aa13.97□□□□□ -0.17
CCHCR1-227ENST00000508852 TBC1D3KA0A087X1G2 549 aa13.97□□□□□ -0.17
CCHCR1-227ENST00000508852 A0A1B0GTQ1 180 aa13.97□□□□□ -0.17
CCHCR1-227ENST00000508852 CXorf51AA0A1B0GTR3 108 aa13.97□□□□□ -0.17
CCHCR1-227ENST00000508852 TBC1D3FA6NER0 549 aaPredicted RBP13.97□□□□□ -0.17
CCHCR1-227ENST00000508852 TBC1D3LB9A6J9 549 aa13.97□□□□□ -0.17
CCHCR1-227ENST00000508852 MCF2LO15068 1137 aa13.97□□□□□ -0.17
CCHCR1-227ENST00000508852 C1SP09871 688 aa13.97□□□□□ -0.17
CCHCR1-227ENST00000508852 TBC1D3HP0C7X1 549 aa13.97□□□□□ -0.17
CCHCR1-227ENST00000508852 SULT1E1P49888 294 aa13.97□□□□□ -0.17
CCHCR1-227ENST00000508852 PITX1P78337 314 aaPredicted RBP13.97□□□□□ -0.17
CCHCR1-227ENST00000508852 SLC20A2Q08357 652 aa13.97□□□□□ -0.17
CCHCR1-227ENST00000508852 TCP11X2Q5H9J9 407 aa13.97□□□□□ -0.17
CCHCR1-227ENST00000508852 MIIPQ5JXC2 388 aa13.97□□□□□ -0.17
CCHCR1-227ENST00000508852 TBC1D3GQ6DHY5 549 aa13.97□□□□□ -0.17
CCHCR1-227ENST00000508852 TBC1D3CQ6IPX1 549 aa13.97□□□□□ -0.17
CCHCR1-227ENST00000508852 NEK5Q6P3R8 708 aa13.97□□□□□ -0.17
CCHCR1-227ENST00000508852 CCNI2Q6ZMN8 369 aaPredicted RBP13.97□□□□□ -0.17
CCHCR1-227ENST00000508852 TBC1D3Q8IZP1 549 aaPredicted RBP13.97□□□□□ -0.17
CCHCR1-227ENST00000508852 FAM131CQ96AQ9 280 aa13.97□□□□□ -0.17
CCHCR1-227ENST00000508852 HAPLN3Q96S86 360 aa13.97□□□□□ -0.17
CCHCR1-227ENST00000508852 ELF4Q99607 663 aaPredicted RBP13.97□□□□□ -0.17
CCHCR1-227ENST00000508852 ORAI3Q9BRQ5 295 aa13.97□□□□□ -0.17
CCHCR1-227ENST00000508852 TKTL2Q9H0I9 626 aa13.97□□□□□ -0.17
CCHCR1-227ENST00000508852 SIK2Q9H0K1 926 aa13.97□□□□□ -0.17
CCHCR1-227ENST00000508852 MTG2Q9H4K7 406 aa13.97□□□□□ -0.17
CCHCR1-227ENST00000508852 HS3ST2Q9Y278 367 aa13.97□□□□□ -0.17
CCHCR1-227ENST00000508852 FRYQ5TBA9 3013 aa13.97□□□□□ -0.17
CCHCR1-227ENST00000508852 KNL1Q8NG31 2342 aa13.97□□□□□ -0.17
CCHCR1-227ENST00000508852 CHD6Q8TD26 2715 aa13.96□□□□□ -0.17
CCHCR1-227ENST00000508852 DRGXA6NNA5 263 aa13.96□□□□□ -0.17
CCHCR1-227ENST00000508852 C10orf142B7Z368 130 aa13.96□□□□□ -0.17
CCHCR1-227ENST00000508852 E9PAM4 449 aa13.96□□□□□ -0.17
CCHCR1-227ENST00000508852 H0Y8X5 98 aa13.96□□□□□ -0.17
CCHCR1-227ENST00000508852 LATO43561 262 aa13.96□□□□□ -0.17
CCHCR1-227ENST00000508852 DKK1O94907 266 aa13.96□□□□□ -0.17
CCHCR1-227ENST00000508852 RHOCP08134 193 aa13.96□□□□□ -0.17
CCHCR1-227ENST00000508852 UCHL3P15374 230 aa13.96□□□□□ -0.17
CCHCR1-227ENST00000508852 STK19P49842 368 aaPredicted RBP13.96□□□□□ -0.17
CCHCR1-227ENST00000508852 RNASE9P60153 205 aaKnown RBP13.96□□□□□ -0.17
CCHCR1-227ENST00000508852 APBA1Q02410 837 aa13.96□□□□□ -0.17
CCHCR1-227ENST00000508852 DLG2Q15700 870 aa13.96□□□□□ -0.17
CCHCR1-227ENST00000508852 DPCR1Q3MIW9 517 aa13.96□□□□□ -0.17
CCHCR1-227ENST00000508852 SETMARQ53H47 684 aaPredicted RBP13.96□□□□□ -0.17
CCHCR1-227ENST00000508852 FKBP15Q5T1M5 1219 aa13.96□□□□□ -0.17
CCHCR1-227ENST00000508852 FAM102AQ5T9C2 384 aaPredicted RBP13.96□□□□□ -0.17
CCHCR1-227ENST00000508852 NAPEPLDQ6IQ20 393 aa13.96□□□□□ -0.17
CCHCR1-227ENST00000508852 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.96□□□□□ -0.17
CCHCR1-227ENST00000508852 TMPRSS7Q7RTY8 843 aa13.96□□□□□ -0.17
CCHCR1-227ENST00000508852 TRIM69Q86WT6 500 aa13.96□□□□□ -0.17
CCHCR1-227ENST00000508852 SH2D3CQ8N5H7 860 aa13.96□□□□□ -0.17
CCHCR1-227ENST00000508852 AADATQ8N5Z0 425 aa13.96□□□□□ -0.17
CCHCR1-227ENST00000508852 MFSD2AQ8NA29 543 aa13.96□□□□□ -0.17
CCHCR1-227ENST00000508852 ANKRD20A12PQ8NF67 263 aa13.96□□□□□ -0.17
CCHCR1-227ENST00000508852 FAM174AQ8TBP5 190 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms