RNA–Protein interactions for RNA: ENST00000507597.5

USP53-203, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 3

Gene USP53, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-203ENST00000507597 KDM1BQ8NB78 822 aa20.57■□□□□ 0.88
USP53-203ENST00000507597 FLCNQ8NFG4 579 aa20.57■□□□□ 0.88
USP53-203ENST00000507597 PCDH19Q8TAB3 1148 aa20.57■□□□□ 0.88
USP53-203ENST00000507597 NSMCE1Q8WV22 266 aa20.57■□□□□ 0.88
USP53-203ENST00000507597 MAIP1Q8WWC4 291 aa20.57■□□□□ 0.88
USP53-203ENST00000507597 TTC17Q96AE7 1141 aa20.57■□□□□ 0.88
USP53-203ENST00000507597 ZNF212Q9UDV6 495 aa20.57■□□□□ 0.88
USP53-203ENST00000507597 CLEC4EQ9ULY5 219 aa20.57■□□□□ 0.88
USP53-203ENST00000507597 C3orf70A6NLC5 250 aaPredicted RBP20.56■□□□□ 0.88
USP53-203ENST00000507597 USP27XA6NNY8 438 aa20.56■□□□□ 0.88
USP53-203ENST00000507597 RASA4BC9J798 803 aa20.56■□□□□ 0.88
USP53-203ENST00000507597 KCNK3O14649 394 aa20.56■□□□□ 0.88
USP53-203ENST00000507597 RASA4O43374 803 aa20.56■□□□□ 0.88
USP53-203ENST00000507597 ZNF189O75820 626 aaPredicted RBP20.56■□□□□ 0.88
USP53-203ENST00000507597 DLDP09622 509 aaKnown RBP20.56■□□□□ 0.88
USP53-203ENST00000507597 CD72P21854 359 aa20.56■□□□□ 0.88
USP53-203ENST00000507597 TGM2P21980 687 aa20.56■□□□□ 0.88
USP53-203ENST00000507597 DNA2P51530 1060 aa20.56■□□□□ 0.88
USP53-203ENST00000507597 ECT2LQ008S8 904 aa20.56■□□□□ 0.88
USP53-203ENST00000507597 TAZQ16635 292 aa20.56■□□□□ 0.88
USP53-203ENST00000507597 GEN1Q17RS7 908 aa20.56■□□□□ 0.88
USP53-203ENST00000507597 TMCO4Q5TGY1 634 aa20.56■□□□□ 0.88
USP53-203ENST00000507597 KAZNQ674X7 775 aa20.56■□□□□ 0.88
USP53-203ENST00000507597 FSTL4Q6MZW2 842 aa20.56■□□□□ 0.88
USP53-203ENST00000507597 TTC13Q8NBP0 860 aa20.56■□□□□ 0.88
USP53-203ENST00000507597 WFDC5Q8TCV5 224 aa20.56■□□□□ 0.88
USP53-203ENST00000507597 ARHGEF2Q92974 986 aaKnown RBP20.56■□□□□ 0.88
USP53-203ENST00000507597 PBKQ96KB5 322 aa20.56■□□□□ 0.88
USP53-203ENST00000507597 FERMT1Q9BQL6 677 aa20.56■□□□□ 0.88
USP53-203ENST00000507597 OSBPL8Q9BZF1 889 aa20.56■□□□□ 0.88
USP53-203ENST00000507597 BRD8Q9H0E9 1235 aa20.56■□□□□ 0.88
USP53-203ENST00000507597 LMAN1LQ9HAT1 526 aa20.56■□□□□ 0.88
USP53-203ENST00000507597 hCG_1818297A0A087WSY0 165 aa20.55■□□□□ 0.88
USP53-203ENST00000507597 CTAGE9A4FU28 777 aa20.55■□□□□ 0.88
USP53-203ENST00000507597 KIF2AO00139 706 aaPredicted RBP20.55■□□□□ 0.88
USP53-203ENST00000507597 EGFP01133 1207 aa20.55■□□□□ 0.88
USP53-203ENST00000507597 MZF1P28698 734 aaPredicted RBP20.55■□□□□ 0.88
USP53-203ENST00000507597 MARCKSL1P49006 195 aa20.55■□□□□ 0.88
USP53-203ENST00000507597 CLCN5P51795 746 aa20.55■□□□□ 0.88
USP53-203ENST00000507597 CCINQ13939 588 aa20.55■□□□□ 0.88
USP53-203ENST00000507597 IER5LQ5T953 404 aa20.55■□□□□ 0.88
USP53-203ENST00000507597 SLC9A4Q6AI14 798 aa20.55■□□□□ 0.88
USP53-203ENST00000507597 ASTLQ6HA08 431 aaPredicted RBP20.55■□□□□ 0.88
USP53-203ENST00000507597 PJA1Q8NG27 643 aa20.55■□□□□ 0.88
USP53-203ENST00000507597 CASKIN2Q8WXE0 1202 aa20.55■□□□□ 0.88
USP53-203ENST00000507597 P3H4Q92791 437 aa20.55■□□□□ 0.88
USP53-203ENST00000507597 LMLNQ96KR4 655 aa20.55■□□□□ 0.88
USP53-203ENST00000507597 NAP1L3Q99457 506 aaPredicted RBP20.55■□□□□ 0.88
USP53-203ENST00000507597 DFFAO00273 331 aa20.54■□□□□ 0.88
USP53-203ENST00000507597 PPP1R12AO14974 1030 aaPredicted RBP20.54■□□□□ 0.88
USP53-203ENST00000507597 TRIM24O15164 1050 aa20.54■□□□□ 0.88
USP53-203ENST00000507597 ZBTB24O43167 697 aaPredicted RBP20.54■□□□□ 0.88
USP53-203ENST00000507597 KDELR3O43731 214 aa20.54■□□□□ 0.88
USP53-203ENST00000507597 CST8O60676 142 aa20.54■□□□□ 0.88
USP53-203ENST00000507597 PYGMP11217 842 aa20.54■□□□□ 0.88
USP53-203ENST00000507597 CHRNB1P11230 501 aa20.54■□□□□ 0.88
USP53-203ENST00000507597 HNRNPLP14866 589 aaKnown RBP eCLIP20.54■□□□□ 0.885e-7■■■■■ 30
USP53-203ENST00000507597 TARSP26639 723 aaKnown RBP20.54■□□□□ 0.88
USP53-203ENST00000507597 RPS9P46781 194 aaKnown RBP20.54■□□□□ 0.88
USP53-203ENST00000507597 VASPP50552 380 aaPredicted RBP20.54■□□□□ 0.88
USP53-203ENST00000507597 FUT11Q495W5 492 aa20.54■□□□□ 0.88
USP53-203ENST00000507597 ARTNQ5T4W7 220 aa20.54■□□□□ 0.88
USP53-203ENST00000507597 NCBP2-AS2Q69YL0 99 aa20.54■□□□□ 0.88
USP53-203ENST00000507597 TIGD7Q6NT04 549 aaPredicted RBP20.54■□□□□ 0.88
USP53-203ENST00000507597 BMP8AQ7Z5Y6 402 aa20.54■□□□□ 0.88
USP53-203ENST00000507597 ADIPOR2Q86V24 386 aa20.54■□□□□ 0.88
USP53-203ENST00000507597 BBS5Q8N3I7 341 aa20.54■□□□□ 0.88
USP53-203ENST00000507597 ZNF513Q8N8E2 541 aaPredicted RBP20.54■□□□□ 0.88
USP53-203ENST00000507597 ALG3Q92685 438 aa20.54■□□□□ 0.88
USP53-203ENST00000507597 PBXIP1Q96AQ6 731 aa20.54■□□□□ 0.88
USP53-203ENST00000507597 P2RY11Q96G91 374 aa20.54■□□□□ 0.88
USP53-203ENST00000507597 NAPGQ99747 312 aaPredicted RBP20.54■□□□□ 0.88
USP53-203ENST00000507597 TLR10Q9BXR5 811 aa20.54■□□□□ 0.88
USP53-203ENST00000507597 COL25A1Q9BXS0 654 aaPredicted RBP20.54■□□□□ 0.88
USP53-203ENST00000507597 ACE2Q9BYF1 805 aaPredicted RBP20.54■□□□□ 0.88
USP53-203ENST00000507597 LRRC19Q9H756 370 aa20.54■□□□□ 0.88
USP53-203ENST00000507597 FBRSL1Q9HCM7 1045 aaKnown RBP20.54■□□□□ 0.88
USP53-203ENST00000507597 SUN2Q9UH99 717 aa20.54■□□□□ 0.88
USP53-203ENST00000507597 COL4A2P08572 1712 aa20.53■□□□□ 0.88
USP53-203ENST00000507597 A0A0D9SEW6 157 aa20.53■□□□□ 0.88
USP53-203ENST00000507597 PRRT4C9JH25 899 aa20.53■□□□□ 0.88
USP53-203ENST00000507597 K7EQS6 105 aa20.53■□□□□ 0.88
USP53-203ENST00000507597 CBX4O00257 560 aa20.53■□□□□ 0.88
USP53-203ENST00000507597 TCP1P17987 556 aaKnown RBP20.53■□□□□ 0.88
USP53-203ENST00000507597 CLCN6P51797 869 aa20.53■□□□□ 0.88
USP53-203ENST00000507597 SERINC3Q13530 473 aa20.53■□□□□ 0.88
USP53-203ENST00000507597 PDK1Q15118 436 aa20.53■□□□□ 0.88
USP53-203ENST00000507597 EOGTQ5NDL2 527 aa20.53■□□□□ 0.88
USP53-203ENST00000507597 BBS12Q6ZW61 710 aa20.53■□□□□ 0.88
USP53-203ENST00000507597 APCDD1Q8J025 514 aa20.53■□□□□ 0.88
USP53-203ENST00000507597 ATPAF2Q8N5M1 289 aa20.53■□□□□ 0.88
USP53-203ENST00000507597 OR7D4Q8NG98 312 aa20.53■□□□□ 0.88
USP53-203ENST00000507597 HAUS1Q96CS2 278 aa20.53■□□□□ 0.88
USP53-203ENST00000507597 ALG14Q96F25 216 aa20.53■□□□□ 0.88
USP53-203ENST00000507597 CELF6Q96J87 481 aaKnown RBP20.53■□□□□ 0.88
USP53-203ENST00000507597 SLC39A8Q9C0K1 460 aa20.53■□□□□ 0.88
USP53-203ENST00000507597 SP110Q9HB58 689 aa20.53■□□□□ 0.88
USP53-203ENST00000507597 NDFIP2Q9NV92 336 aa20.53■□□□□ 0.88
USP53-203ENST00000507597 THAP10Q9P2Z0 257 aaPredicted RBP20.53■□□□□ 0.88
USP53-203ENST00000507597 HEY1Q9Y5J3 304 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms