RNA–Protein interactions for RNA: ENST00000504781.5

DDX41-203, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 618 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-203ENST00000504781 PARP15Q460N3 678 aa10.39□□□□□ -0.75
DDX41-203ENST00000504781 FAM133BQ5BKY9 247 aaKnown RBP10.39□□□□□ -0.75
DDX41-203ENST00000504781 TCEAL5Q5H9L2 206 aa10.39□□□□□ -0.75
DDX41-203ENST00000504781 MPP7Q5T2T1 576 aa10.39□□□□□ -0.75
DDX41-203ENST00000504781 TMCO4Q5TGY1 634 aa10.39□□□□□ -0.75
DDX41-203ENST00000504781 LRIG3Q6UXM1 1119 aa10.39□□□□□ -0.75
DDX41-203ENST00000504781 TMEM184AQ6ZMB5 413 aa10.39□□□□□ -0.75
DDX41-203ENST00000504781 ZNF783Q6ZMS7 281 aa10.39□□□□□ -0.75
DDX41-203ENST00000504781 ARHGEF18Q6ZSZ5 1173 aa10.39□□□□□ -0.75
DDX41-203ENST00000504781 CENPUQ71F23 418 aa10.39□□□□□ -0.75
DDX41-203ENST00000504781 CHST9Q7L1S5 443 aa10.39□□□□□ -0.75
DDX41-203ENST00000504781 PRUNE1Q86TP1 453 aa10.39□□□□□ -0.75
DDX41-203ENST00000504781 SETD3Q86TU7 594 aaPredicted RBP10.39□□□□□ -0.75
DDX41-203ENST00000504781 CHSY1Q86X52 802 aa10.39□□□□□ -0.75
DDX41-203ENST00000504781 FAM217AQ8IXS0 508 aa10.39□□□□□ -0.75
DDX41-203ENST00000504781 GSPT2Q8IYD1 628 aaKnown RBP10.39□□□□□ -0.75
DDX41-203ENST00000504781 CPXM2Q8N436 756 aa10.39□□□□□ -0.75
DDX41-203ENST00000504781 NPWQ8N729 165 aa10.39□□□□□ -0.75
DDX41-203ENST00000504781 ZSCAN18Q8TBC5 510 aaPredicted RBP10.39□□□□□ -0.75
DDX41-203ENST00000504781 ZFRQ96KR1 1074 aaKnown RBP10.39□□□□□ -0.75
DDX41-203ENST00000504781 TEKT5Q96M29 485 aa10.39□□□□□ -0.75
DDX41-203ENST00000504781 IL12RB2Q99665 862 aa10.39□□□□□ -0.75
DDX41-203ENST00000504781 ETNK1Q9HBU6 452 aa10.39□□□□□ -0.75
DDX41-203ENST00000504781 RAB6BQ9NRW1 208 aa10.39□□□□□ -0.75
DDX41-203ENST00000504781 MPP6Q9NZW5 540 aa10.39□□□□□ -0.75
DDX41-203ENST00000504781 IGSF9Q9P2J2 1179 aa10.39□□□□□ -0.75
DDX41-203ENST00000504781 ZNF212Q9UDV6 495 aa10.39□□□□□ -0.75
DDX41-203ENST00000504781 RAPGEFL1Q9UHV5 662 aa10.39□□□□□ -0.75
DDX41-203ENST00000504781 ARHGAP26Q9UNA1 814 aa10.39□□□□□ -0.75
DDX41-203ENST00000504781 ATP8A1Q9Y2Q0 1164 aa10.39□□□□□ -0.75
DDX41-203ENST00000504781 HCFC2Q9Y5Z7 792 aa10.39□□□□□ -0.75
DDX41-203ENST00000504781 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.38□□□□□ -0.75
DDX41-203ENST00000504781 A0A1W2PRU2 124 aa10.38□□□□□ -0.75
DDX41-203ENST00000504781 ILVBLA1L0T0 632 aa10.38□□□□□ -0.75
DDX41-203ENST00000504781 GOLGA6BA6NDN3 693 aa10.38□□□□□ -0.75
DDX41-203ENST00000504781 ERI2A8K979 691 aaKnown RBP10.38□□□□□ -0.75
DDX41-203ENST00000504781 AP3B1O00203 1094 aa10.38□□□□□ -0.75
DDX41-203ENST00000504781 RNF103O00237 685 aa10.38□□□□□ -0.75
DDX41-203ENST00000504781 PER2O15055 1255 aa10.38□□□□□ -0.75
DDX41-203ENST00000504781 CACNG3O60359 315 aa10.38□□□□□ -0.75
DDX41-203ENST00000504781 GREM1O60565 184 aa10.38□□□□□ -0.75
DDX41-203ENST00000504781 SASH3O75995 380 aa10.38□□□□□ -0.75
DDX41-203ENST00000504781 CNTN5O94779 1100 aa10.38□□□□□ -0.75
DDX41-203ENST00000504781 MAP3K6O95382 1288 aa10.38□□□□□ -0.75
DDX41-203ENST00000504781 TTC4O95801 387 aa10.38□□□□□ -0.75
DDX41-203ENST00000504781 MLNP12872 115 aa10.38□□□□□ -0.75
DDX41-203ENST00000504781 TPSB2P20231 275 aa10.38□□□□□ -0.75
DDX41-203ENST00000504781 SLC6A4P31645 630 aa10.38□□□□□ -0.75
DDX41-203ENST00000504781 HSD17B3P37058 310 aa10.38□□□□□ -0.75
DDX41-203ENST00000504781 ETFBP38117 255 aa10.38□□□□□ -0.75
DDX41-203ENST00000504781 MAGEA4P43358 317 aa10.38□□□□□ -0.75
DDX41-203ENST00000504781 IFNAR2P48551 515 aa10.38□□□□□ -0.75
DDX41-203ENST00000504781 PAPOLAP51003 745 aaKnown RBP10.38□□□□□ -0.75
DDX41-203ENST00000504781 OXCT1P55809 520 aa10.38□□□□□ -0.75
DDX41-203ENST00000504781 IFI35P80217 286 aaPredicted RBP10.38□□□□□ -0.75
DDX41-203ENST00000504781 BASP1P80723 227 aaKnown RBP10.38□□□□□ -0.75
DDX41-203ENST00000504781 TNK2Q07912 1038 aa10.38□□□□□ -0.75
DDX41-203ENST00000504781 SEMA5AQ13591 1074 aa10.38□□□□□ -0.75
DDX41-203ENST00000504781 KCNJ11Q14654 390 aa10.38□□□□□ -0.75
DDX41-203ENST00000504781 TPSAB1Q15661 275 aa10.38□□□□□ -0.75
DDX41-203ENST00000504781 ITPRIPL1Q6GPH6 555 aa10.38□□□□□ -0.75
DDX41-203ENST00000504781 PTCRAQ6ISU1 281 aaPredicted RBP10.38□□□□□ -0.75
DDX41-203ENST00000504781 Q6ZNB5 142 aa10.38□□□□□ -0.75
DDX41-203ENST00000504781 B4GALNT4Q76KP1 1039 aa10.38□□□□□ -0.75
DDX41-203ENST00000504781 CMTM8Q8IZV2 173 aa10.38□□□□□ -0.75
DDX41-203ENST00000504781 PDIK1LQ8N165 341 aa10.38□□□□□ -0.75
DDX41-203ENST00000504781 ZNF567Q8N184 647 aa10.38□□□□□ -0.75
DDX41-203ENST00000504781 CCDC110Q8TBZ0 833 aa10.38□□□□□ -0.75
DDX41-203ENST00000504781 MAML1Q92585 1016 aa10.38□□□□□ -0.75
DDX41-203ENST00000504781 PRCCQ92733 491 aaPredicted RBP10.38□□□□□ -0.75
DDX41-203ENST00000504781 LRRC39Q96DD0 335 aa10.38□□□□□ -0.75
DDX41-203ENST00000504781 TMA16Q96EY4 203 aaKnown RBP10.38□□□□□ -0.75
DDX41-203ENST00000504781 GDAP1L1Q96MZ0 367 aa10.38□□□□□ -0.75
DDX41-203ENST00000504781 TTC25Q96NG3 672 aa10.38□□□□□ -0.75
DDX41-203ENST00000504781 SLC22A12Q96S37 553 aa10.38□□□□□ -0.75
DDX41-203ENST00000504781 RBM15Q96T37 977 aaKnown RBP eCLIP10.38□□□□□ -0.75
DDX41-203ENST00000504781 ROPN1BQ9BZX4 212 aaPredicted RBP10.38□□□□□ -0.75
DDX41-203ENST00000504781 NSUN3Q9H649 340 aaKnown RBP10.38□□□□□ -0.75
DDX41-203ENST00000504781 IGFLR1Q9H665 355 aa10.38□□□□□ -0.75
DDX41-203ENST00000504781 EPHX3Q9H6B9 360 aa10.38□□□□□ -0.75
DDX41-203ENST00000504781 NOL6Q9H6R4 1146 aaKnown RBP10.38□□□□□ -0.75
DDX41-203ENST00000504781 ROPN1Q9HAT0 212 aaPredicted RBP10.38□□□□□ -0.75
DDX41-203ENST00000504781 TRPC7Q9HCX4 862 aa10.38□□□□□ -0.75
DDX41-203ENST00000504781 EIF2B3Q9NR50 452 aaKnown RBP10.38□□□□□ -0.75
DDX41-203ENST00000504781 HAUS2Q9NVX0 235 aa10.38□□□□□ -0.75
DDX41-203ENST00000504781 CLDND1Q9NY35 253 aa10.38□□□□□ -0.75
DDX41-203ENST00000504781 OGFRQ9NZT2 677 aa10.38□□□□□ -0.75
DDX41-203ENST00000504781 TBC1D30Q9Y2I9 924 aa10.38□□□□□ -0.75
DDX41-203ENST00000504781 AAR2Q9Y312 384 aaKnown RBP10.38□□□□□ -0.75
DDX41-203ENST00000504781 SH3BP1Q9Y3L3 701 aa10.38□□□□□ -0.75
DDX41-203ENST00000504781 CPQQ9Y646 472 aa10.38□□□□□ -0.75
DDX41-203ENST00000504781 CXorf51AA0A1B0GTR3 108 aa10.37□□□□□ -0.75
DDX41-203ENST00000504781 A0A1B0GVM2 712 aa10.37□□□□□ -0.75
DDX41-203ENST00000504781 GOLGA6CA6NDK9 693 aa10.37□□□□□ -0.75
DDX41-203ENST00000504781 TCAF2A6NFQ2 919 aa10.37□□□□□ -0.75
DDX41-203ENST00000504781 RASA4BC9J798 803 aa10.37□□□□□ -0.75
DDX41-203ENST00000504781 E7ESA3 106 aa10.37□□□□□ -0.75
DDX41-203ENST00000504781 E7EVH7 732 aa10.37□□□□□ -0.75
DDX41-203ENST00000504781 DFFAO00273 331 aa10.37□□□□□ -0.75
DDX41-203ENST00000504781 GFRA2O00451 464 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms