RNA–Protein interactions for RNA: ENST00000503291.5

CDC42SE2-206, Transcript of CDC42 small effector 2, humanhuman

TSL 1 (best) BASIC

Gene CDC42SE2, Length 2,025 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-206ENST00000503291 SNX1Q13596 522 aa20.89■□□□□ 0.93
CDC42SE2-206ENST00000503291 PDK1Q15118 436 aa20.89■□□□□ 0.93
CDC42SE2-206ENST00000503291 B4GALNT4Q76KP1 1039 aa20.89■□□□□ 0.93
CDC42SE2-206ENST00000503291 LMLNQ96KR4 655 aa20.89■□□□□ 0.93
CDC42SE2-206ENST00000503291 LGMNQ99538 433 aa20.89■□□□□ 0.93
CDC42SE2-206ENST00000503291 SPON2Q9BUD6 331 aa20.89■□□□□ 0.93
CDC42SE2-206ENST00000503291 FRMD8P1Q9BZ68 369 aaPredicted RBP20.89■□□□□ 0.93
CDC42SE2-206ENST00000503291 TRPV5Q9NQA5 729 aa20.89■□□□□ 0.93
CDC42SE2-206ENST00000503291 DNAJC17Q9NVM6 304 aaKnown RBP20.89■□□□□ 0.93
CDC42SE2-206ENST00000503291 OR51B4Q9Y5P0 310 aa20.89■□□□□ 0.93
CDC42SE2-206ENST00000503291 ARHGAP42A6NI28 874 aa20.88■□□□□ 0.93
CDC42SE2-206ENST00000503291 MCF2LO15068 1137 aa20.88■□□□□ 0.93
CDC42SE2-206ENST00000503291 RBP3P10745 1247 aa20.88■□□□□ 0.93
CDC42SE2-206ENST00000503291 BMP1P13497 986 aa20.88■□□□□ 0.93
CDC42SE2-206ENST00000503291 GARSP41250 739 aaKnown RBP20.88■□□□□ 0.93
CDC42SE2-206ENST00000503291 SLC6A11P48066 632 aa20.88■□□□□ 0.93
CDC42SE2-206ENST00000503291 XRCC4Q13426 336 aa20.88■□□□□ 0.93
CDC42SE2-206ENST00000503291 CYP1B1Q16678 543 aa20.88■□□□□ 0.93
CDC42SE2-206ENST00000503291 IL31Q6EBC2 164 aa20.88■□□□□ 0.93
CDC42SE2-206ENST00000503291 ARHGAP36Q6ZRI8 547 aa20.88■□□□□ 0.93
CDC42SE2-206ENST00000503291 ZNF572Q7Z3I7 529 aaPredicted RBP20.88■□□□□ 0.93
CDC42SE2-206ENST00000503291 CCNYQ8ND76 341 aa20.88■□□□□ 0.93
CDC42SE2-206ENST00000503291 MAGOHBQ96A72 148 aaKnown RBP20.88■□□□□ 0.93
CDC42SE2-206ENST00000503291 ALG14Q96F25 216 aa20.88■□□□□ 0.93
CDC42SE2-206ENST00000503291 ASB2Q96Q27 587 aa20.88■□□□□ 0.93
CDC42SE2-206ENST00000503291 RBM12Q9NTZ6 932 aaKnown RBP20.88■□□□□ 0.93
CDC42SE2-206ENST00000503291 H7C0C1 242 aa20.88■□□□□ 0.93
CDC42SE2-206ENST00000503291 NARSO43776 548 aaKnown RBP20.88■□□□□ 0.93
CDC42SE2-206ENST00000503291 CISD3P0C7P0 127 aa20.88■□□□□ 0.93
CDC42SE2-206ENST00000503291 ETFBP38117 255 aa20.88■□□□□ 0.93
CDC42SE2-206ENST00000503291 ATP5OP48047 213 aa20.88■□□□□ 0.93
CDC42SE2-206ENST00000503291 DGKGP49619 791 aa20.88■□□□□ 0.93
CDC42SE2-206ENST00000503291 SERINC3Q13530 473 aa20.88■□□□□ 0.93
CDC42SE2-206ENST00000503291 BYSLQ13895 437 aaKnown RBP20.88■□□□□ 0.93
CDC42SE2-206ENST00000503291 ZNF354CQ86Y25 554 aa20.88■□□□□ 0.93
CDC42SE2-206ENST00000503291 APCDD1Q8J025 514 aa20.88■□□□□ 0.93
CDC42SE2-206ENST00000503291 CHFRQ96EP1 664 aa20.88■□□□□ 0.93
CDC42SE2-206ENST00000503291 C10orf88Q9H8K7 445 aa20.88■□□□□ 0.93
CDC42SE2-206ENST00000503291 PPP1R12AO14974 1030 aaPredicted RBP20.87■□□□□ 0.93
CDC42SE2-206ENST00000503291 SOX9P48436 509 aa20.87■□□□□ 0.93
CDC42SE2-206ENST00000503291 SLC12A1Q13621 1099 aa20.87■□□□□ 0.93
CDC42SE2-206ENST00000503291 LRRC49Q8IUZ0 686 aa20.87■□□□□ 0.93
CDC42SE2-206ENST00000503291 CHD5Q8TDI0 1954 aa20.87■□□□□ 0.93
CDC42SE2-206ENST00000503291 TFB1MQ8WVM0 346 aaKnown RBP20.87■□□□□ 0.93
CDC42SE2-206ENST00000503291 NKD2Q969F2 451 aaPredicted RBP20.87■□□□□ 0.93
CDC42SE2-206ENST00000503291 HDAC11Q96DB2 347 aa20.87■□□□□ 0.93
CDC42SE2-206ENST00000503291 CARD6Q9BX69 1037 aa20.87■□□□□ 0.93
CDC42SE2-206ENST00000503291 ACE2Q9BYF1 805 aaPredicted RBP20.87■□□□□ 0.93
CDC42SE2-206ENST00000503291 ATP13A1Q9HD20 1204 aa20.87■□□□□ 0.93
CDC42SE2-206ENST00000503291 DEC1Q9P2X7 70 aa20.87■□□□□ 0.93
CDC42SE2-206ENST00000503291 IPO11Q9UI26 975 aaKnown RBP20.87■□□□□ 0.93
CDC42SE2-206ENST00000503291 VPS28Q9UK41 221 aa20.87■□□□□ 0.93
CDC42SE2-206ENST00000503291 INTS6Q9UL03 887 aaKnown RBP20.87■□□□□ 0.93
CDC42SE2-206ENST00000503291 TICRRQ7Z2Z1 1910 aa20.87■□□□□ 0.93
CDC42SE2-206ENST00000503291 C19orf67A6NJJ6 358 aa20.87■□□□□ 0.93
CDC42SE2-206ENST00000503291 CCDC188H7C350 402 aa20.87■□□□□ 0.93
CDC42SE2-206ENST00000503291 MAFKO60675 156 aa20.87■□□□□ 0.93
CDC42SE2-206ENST00000503291 PHF2O75151 1096 aa20.87■□□□□ 0.93
CDC42SE2-206ENST00000503291 PABPC1P11940 636 aaKnown RBP20.87■□□□□ 0.93
CDC42SE2-206ENST00000503291 OPRD1P41143 372 aa20.87■□□□□ 0.93
CDC42SE2-206ENST00000503291 KCNJ1P48048 391 aa20.87■□□□□ 0.93
CDC42SE2-206ENST00000503291 DRICH1Q6PGQ1 229 aaPredicted RBP20.87■□□□□ 0.93
CDC42SE2-206ENST00000503291 DARS2Q6PI48 645 aaKnown RBP20.87■□□□□ 0.93
CDC42SE2-206ENST00000503291 ATPAF2Q8N5M1 289 aa20.87■□□□□ 0.93
CDC42SE2-206ENST00000503291 CEP112Q8N8E3 955 aa20.87■□□□□ 0.93
CDC42SE2-206ENST00000503291 C12orf50Q8NA57 414 aaPredicted RBP20.87■□□□□ 0.93
CDC42SE2-206ENST00000503291 MNS1Q8NEH6 495 aa20.87■□□□□ 0.93
CDC42SE2-206ENST00000503291 DDX47Q9H0S4 455 aaKnown RBP20.87■□□□□ 0.93
CDC42SE2-206ENST00000503291 GGA2Q9UJY4 613 aa20.87■□□□□ 0.93
CDC42SE2-206ENST00000503291 PLK1P53350 603 aa20.86■□□□□ 0.93
CDC42SE2-206ENST00000503291 PPIDQ08752 370 aaKnown RBP20.86■□□□□ 0.93
CDC42SE2-206ENST00000503291 C2orf54Q08AI8 447 aa20.86■□□□□ 0.93
CDC42SE2-206ENST00000503291 AP1B1Q10567 949 aa20.86■□□□□ 0.93
CDC42SE2-206ENST00000503291 OASLQ15646 514 aaKnown RBP20.86■□□□□ 0.93
CDC42SE2-206ENST00000503291 PLEKHG6Q3KR16 790 aa20.86■□□□□ 0.93
CDC42SE2-206ENST00000503291 SLC45A4Q5BKX6 768 aa20.86■□□□□ 0.93
CDC42SE2-206ENST00000503291 NAIF1Q69YI7 327 aaPredicted RBP20.86■□□□□ 0.93
CDC42SE2-206ENST00000503291 TTC27Q6P3X3 843 aa20.86■□□□□ 0.93
CDC42SE2-206ENST00000503291 DNASE1L2Q92874 299 aa20.86■□□□□ 0.93
CDC42SE2-206ENST00000503291 TSGA13Q96PP4 275 aa20.86■□□□□ 0.93
CDC42SE2-206ENST00000503291 BRD8Q9H0E9 1235 aa20.86■□□□□ 0.93
CDC42SE2-206ENST00000503291 ZNF148Q9UQR1 794 aa20.86■□□□□ 0.93
CDC42SE2-206ENST00000503291 SLC27A6Q9Y2P4 619 aa20.86■□□□□ 0.93
CDC42SE2-206ENST00000503291 NYNRINQ9P2P1 1898 aaKnown RBP20.86■□□□□ 0.93
CDC42SE2-206ENST00000503291 CTAGE15A4D2H0 777 aa20.85■□□□□ 0.93
CDC42SE2-206ENST00000503291 HACD1B0YJ81 288 aa20.85■□□□□ 0.93
CDC42SE2-206ENST00000503291 J3KR12 359 aa20.85■□□□□ 0.93
CDC42SE2-206ENST00000503291 KDELR3O43731 214 aa20.85■□□□□ 0.93
CDC42SE2-206ENST00000503291 CTAGE8P0CG41 777 aa20.85■□□□□ 0.93
CDC42SE2-206ENST00000503291 SRFP11831 508 aa20.85■□□□□ 0.93
CDC42SE2-206ENST00000503291 GLDCP23378 1020 aa20.85■□□□□ 0.93
CDC42SE2-206ENST00000503291 MESP2Q0VG99 397 aa20.85■□□□□ 0.93
CDC42SE2-206ENST00000503291 GEN1Q17RS7 908 aa20.85■□□□□ 0.93
CDC42SE2-206ENST00000503291 CCDC137Q6PK04 289 aaKnown RBP20.85■□□□□ 0.93
CDC42SE2-206ENST00000503291 KIAA0907Q7Z7F0 614 aaPredicted RBP20.85■□□□□ 0.93
CDC42SE2-206ENST00000503291 CTAGE6Q86UF2 777 aa20.85■□□□□ 0.93
CDC42SE2-206ENST00000503291 CTAGE4Q8IX94 777 aa20.85■□□□□ 0.93
CDC42SE2-206ENST00000503291 KLHL7Q8IXQ5 586 aa20.85■□□□□ 0.93
CDC42SE2-206ENST00000503291 DDX51Q8N8A6 666 aaKnown RBP eCLIP20.85■□□□□ 0.93
CDC42SE2-206ENST00000503291 TMEM121Q9BTD3 319 aa20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms