RNA–Protein interactions for RNA: ENST00000502717.5

HMGXB3-201, Transcript of HMG-box containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGXB3, Length 4,974 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-201ENST00000502717 RGS5O15539 181 aa17.52■□□□□ 0.39
HMGXB3-201ENST00000502717 SNHG28P0DPA3 235 aa17.52■□□□□ 0.39
HMGXB3-201ENST00000502717 S100A1P23297 94 aa17.52■□□□□ 0.39
HMGXB3-201ENST00000502717 EPHA3P29320 983 aa17.52■□□□□ 0.39
HMGXB3-201ENST00000502717 PGM5Q15124 567 aa17.52■□□□□ 0.39
HMGXB3-201ENST00000502717 C6orf52Q5T4I8 152 aa17.52■□□□□ 0.39
HMGXB3-201ENST00000502717 MON1BQ7L1V2 547 aa17.52■□□□□ 0.39
HMGXB3-201ENST00000502717 PHF21BQ96EK2 531 aa17.52■□□□□ 0.39
HMGXB3-201ENST00000502717 MTG1Q9BT17 334 aaPredicted RBP17.52■□□□□ 0.39
HMGXB3-201ENST00000502717 MRIQ9BWK5 157 aa17.52■□□□□ 0.39
HMGXB3-201ENST00000502717 MTF2Q9Y483 593 aaPredicted RBP17.52■□□□□ 0.39
HMGXB3-201ENST00000502717 TBKBP1A7MCY6 615 aa17.51■□□□□ 0.39
HMGXB3-201ENST00000502717 SV2CQ496J9 727 aa17.51■□□□□ 0.39
HMGXB3-201ENST00000502717 UGT2B28Q9BY64 529 aa17.51■□□□□ 0.39
HMGXB3-201ENST00000502717 DDIT4Q9NX09 232 aa17.51■□□□□ 0.39
HMGXB3-201ENST00000502717 MORF4L1Q9UBU8 362 aa17.51■□□□□ 0.39
HMGXB3-201ENST00000502717 RNF112Q9ULX5 631 aa17.51■□□□□ 0.39
HMGXB3-201ENST00000502717 SYNPO2Q9UMS6 1093 aa17.51■□□□□ 0.39
HMGXB3-201ENST00000502717 USP4Q13107 963 aa17.51■□□□□ 0.39
HMGXB3-201ENST00000502717 FAM228AQ86W67 206 aa17.51■□□□□ 0.39
HMGXB3-201ENST00000502717 ASB2Q96Q27 587 aa17.51■□□□□ 0.39
HMGXB3-201ENST00000502717 ACE2Q9BYF1 805 aaPredicted RBP17.51■□□□□ 0.39
HMGXB3-201ENST00000502717 PCDHA2Q9Y5H9 948 aa17.51■□□□□ 0.39
HMGXB3-201ENST00000502717 CEP41Q9BYV8 373 aa17.51■□□□□ 0.39
HMGXB3-201ENST00000502717 POMKQ9H5K3 350 aa17.51■□□□□ 0.39
HMGXB3-201ENST00000502717 WDCPQ9H6R7 721 aa17.51■□□□□ 0.39
HMGXB3-201ENST00000502717 STK39Q9UEW8 545 aa17.51■□□□□ 0.39
HMGXB3-201ENST00000502717 TUBGCP4Q9UGJ1 667 aa17.51■□□□□ 0.39
HMGXB3-201ENST00000502717 MFN2O95140 757 aa17.51■□□□□ 0.39
HMGXB3-201ENST00000502717 ZNF12P17014 697 aa17.51■□□□□ 0.39
HMGXB3-201ENST00000502717 CDKN2BP42772 138 aa17.51■□□□□ 0.39
HMGXB3-201ENST00000502717 LLGL2Q6P1M3 1020 aa17.51■□□□□ 0.39
HMGXB3-201ENST00000502717 UNC5AQ6ZN44 842 aa17.51■□□□□ 0.39
HMGXB3-201ENST00000502717 OR7A2PQ8NGA2 310 aa17.51■□□□□ 0.39
HMGXB3-201ENST00000502717 PLK2Q9NYY3 685 aa17.51■□□□□ 0.39
HMGXB3-201ENST00000502717 LMO7Q8WWI1 1683 aa17.51■□□□□ 0.39
HMGXB3-201ENST00000502717 MANSC4A6NHS7 340 aaPredicted RBP17.5■□□□□ 0.39
HMGXB3-201ENST00000502717 ERI2A8K979 691 aaKnown RBP17.5■□□□□ 0.39
HMGXB3-201ENST00000502717 VPS4BO75351 444 aa17.5■□□□□ 0.39
HMGXB3-201ENST00000502717 PNPLA4P41247 253 aa17.5■□□□□ 0.39
HMGXB3-201ENST00000502717 SLC6A3Q01959 620 aa17.5■□□□□ 0.39
HMGXB3-201ENST00000502717 RAD51Q06609 339 aa17.5■□□□□ 0.39
HMGXB3-201ENST00000502717 PRKD1Q15139 912 aaPredicted RBP17.5■□□□□ 0.39
HMGXB3-201ENST00000502717 GNASQ5JWF2 1037 aa17.5■□□□□ 0.39
HMGXB3-201ENST00000502717 EID3Q8N140 333 aa17.5■□□□□ 0.39
HMGXB3-201ENST00000502717 APBA2Q99767 749 aa17.5■□□□□ 0.39
HMGXB3-201ENST00000502717 IMPAD1Q9NX62 359 aa17.5■□□□□ 0.39
HMGXB3-201ENST00000502717 VPS9D1Q9Y2B5 631 aa17.5■□□□□ 0.39
HMGXB3-201ENST00000502717 RGPD8O14715 1765 aaPredicted RBP17.5■□□□□ 0.39
HMGXB3-201ENST00000502717 PTGES3LE9PB15 166 aa17.5■□□□□ 0.39
HMGXB3-201ENST00000502717 AKT1P31749 480 aa17.5■□□□□ 0.39
HMGXB3-201ENST00000502717 ILF2Q12905 390 aaKnown RBP17.5■□□□□ 0.39
HMGXB3-201ENST00000502717 BNIP2Q12982 314 aa17.5■□□□□ 0.39
HMGXB3-201ENST00000502717 LIPMQ5VYY2 423 aa17.5■□□□□ 0.39
HMGXB3-201ENST00000502717 DSELQ8IZU8 1212 aa17.5■□□□□ 0.39
HMGXB3-201ENST00000502717 ZBTB45Q96K62 511 aaPredicted RBP17.5■□□□□ 0.39
HMGXB3-201ENST00000502717 DGCR6LQ9BY27 220 aa17.5■□□□□ 0.39
HMGXB3-201ENST00000502717 RRAGCQ9HB90 399 aa17.5■□□□□ 0.39
HMGXB3-201ENST00000502717 C8orf4Q9NR00 106 aa17.5■□□□□ 0.39
HMGXB3-201ENST00000502717 USE1Q9NZ43 259 aa17.5■□□□□ 0.39
HMGXB3-201ENST00000502717 TSR3Q9UJK0 312 aaKnown RBP17.5■□□□□ 0.39
HMGXB3-201ENST00000502717 KATNA1O75449 491 aa17.5■□□□□ 0.39
HMGXB3-201ENST00000502717 STAG3L1P0CL83 205 aa17.5■□□□□ 0.39
HMGXB3-201ENST00000502717 HLA-DPA1P20036 260 aa17.5■□□□□ 0.39
HMGXB3-201ENST00000502717 TCF7P36402 384 aaPredicted RBP17.5■□□□□ 0.39
HMGXB3-201ENST00000502717 ST13P50502 369 aaKnown RBP17.5■□□□□ 0.39
HMGXB3-201ENST00000502717 CSE1LP55060 971 aaKnown RBP17.5■□□□□ 0.39
HMGXB3-201ENST00000502717 PPIL2Q13356 520 aa17.5■□□□□ 0.39
HMGXB3-201ENST00000502717 TRIM25Q14258 630 aaKnown RBP17.5■□□□□ 0.39
HMGXB3-201ENST00000502717 NDUFA5Q16718 116 aa17.5■□□□□ 0.39
HMGXB3-201ENST00000502717 PERM1Q5SV97 790 aa17.5■□□□□ 0.39
HMGXB3-201ENST00000502717 PIWIL4Q7Z3Z4 852 aaKnown RBP17.5■□□□□ 0.39
HMGXB3-201ENST00000502717 C7orf43Q8WVR3 580 aa17.5■□□□□ 0.39
HMGXB3-201ENST00000502717 PAWRQ96IZ0 340 aaKnown RBP17.5■□□□□ 0.39
HMGXB3-201ENST00000502717 PREBQ9HCU5 417 aa17.5■□□□□ 0.39
HMGXB3-201ENST00000502717 OLA1Q9NTK5 396 aaKnown RBP17.5■□□□□ 0.39
HMGXB3-201ENST00000502717 PPP2R3BQ9Y5P8 575 aa17.5■□□□□ 0.39
HMGXB3-201ENST00000502717 AFDNP55196 1824 aaKnown RBP17.5■□□□□ 0.39
HMGXB3-201ENST00000502717 CNOT3O75175 753 aaKnown RBP17.5■□□□□ 0.39
HMGXB3-201ENST00000502717 TKTP29401 623 aaKnown RBP17.5■□□□□ 0.39
HMGXB3-201ENST00000502717 TNK2Q07912 1038 aa17.5■□□□□ 0.39
HMGXB3-201ENST00000502717 BST2Q10589 180 aaKnown RBP17.5■□□□□ 0.39
HMGXB3-201ENST00000502717 POLD3Q15054 466 aaPredicted RBP17.5■□□□□ 0.39
HMGXB3-201ENST00000502717 CACHD1Q5VU97 1274 aa17.5■□□□□ 0.39
HMGXB3-201ENST00000502717 PGAM4Q8N0Y7 254 aa17.5■□□□□ 0.39
HMGXB3-201ENST00000502717 AAASQ9NRG9 546 aa17.5■□□□□ 0.39
HMGXB3-201ENST00000502717 FARP1Q9Y4F1 1045 aaPredicted RBP17.5■□□□□ 0.39
HMGXB3-201ENST00000502717 NALCNQ8IZF0 1738 aa17.5■□□□□ 0.39
HMGXB3-201ENST00000502717 PDZK1P1A8MUH7 402 aa17.49■□□□□ 0.39
HMGXB3-201ENST00000502717 SCNN1BP51168 640 aa17.49■□□□□ 0.39
HMGXB3-201ENST00000502717 NOMO1Q15155 1222 aa17.49■□□□□ 0.39
HMGXB3-201ENST00000502717 SPRED3Q2MJR0 410 aa17.49■□□□□ 0.39
HMGXB3-201ENST00000502717 AHI1Q8N157 1196 aa17.49■□□□□ 0.39
HMGXB3-201ENST00000502717 SERAC1Q96JX3 654 aa17.49■□□□□ 0.39
HMGXB3-201ENST00000502717 MARK4Q96L34 752 aa17.49■□□□□ 0.39
HMGXB3-201ENST00000502717 SPON2Q9BUD6 331 aa17.49■□□□□ 0.39
HMGXB3-201ENST00000502717 SYTL2Q9HCH5 934 aa17.49■□□□□ 0.39
HMGXB3-201ENST00000502717 A0A087X1B8 175 aa17.49■□□□□ 0.39
HMGXB3-201ENST00000502717 PPP1R11O60927 126 aaPredicted RBP17.49■□□□□ 0.39
HMGXB3-201ENST00000502717 NELFEP18615 380 aaKnown RBP17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms