RNA–Protein interactions for RNA: ENST00000501400.1

LINC00535-201, long intergenic non-protein coding RNA 535, humanhuman

TSL 1 (best) BASIC

Gene LINC00535, Length 1,914 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00535-201ENST00000501400 FNIP2Q9P278 1114 aa18.64■□□□□ 0.58
LINC00535-201ENST00000501400 PLXNA4Q9HCM2 1894 aa18.64■□□□□ 0.57
LINC00535-201ENST00000501400 ALPK3Q96L96 1907 aa18.64■□□□□ 0.57
LINC00535-201ENST00000501400 ZNF840PA6NDX5 716 aa18.64■□□□□ 0.57
LINC00535-201ENST00000501400 MATN3O15232 486 aa18.64■□□□□ 0.57
LINC00535-201ENST00000501400 UGT1A9O60656 530 aa18.64■□□□□ 0.57
LINC00535-201ENST00000501400 GJB5O95377 273 aa18.64■□□□□ 0.57
LINC00535-201ENST00000501400 INHBAP08476 426 aa18.64■□□□□ 0.57
LINC00535-201ENST00000501400 DRD4P21917 467 aa18.64■□□□□ 0.57
LINC00535-201ENST00000501400 WDR4P57081 412 aaKnown RBP18.64■□□□□ 0.57
LINC00535-201ENST00000501400 OTOP3Q7RTS5 596 aa18.64■□□□□ 0.57
LINC00535-201ENST00000501400 DDX53Q86TM3 631 aaKnown RBP18.64■□□□□ 0.57
LINC00535-201ENST00000501400 UNC5BQ8IZJ1 945 aa18.64■□□□□ 0.57
LINC00535-201ENST00000501400 PPM1NQ8N819 430 aa18.64■□□□□ 0.57
LINC00535-201ENST00000501400 DENND1AQ8TEH3 1009 aa18.64■□□□□ 0.57
LINC00535-201ENST00000501400 CHMP6Q96FZ7 201 aa18.64■□□□□ 0.57
LINC00535-201ENST00000501400 SMC6Q96SB8 1091 aa18.64■□□□□ 0.57
LINC00535-201ENST00000501400 UGT1A7Q9HAW7 530 aa18.64■□□□□ 0.57
LINC00535-201ENST00000501400 UGT1A10Q9HAW8 530 aa18.64■□□□□ 0.57
LINC00535-201ENST00000501400 UGT1A8Q9HAW9 530 aa18.64■□□□□ 0.57
LINC00535-201ENST00000501400 CYP4F11Q9HBI6 524 aa18.64■□□□□ 0.57
LINC00535-201ENST00000501400 OBSL1O75147 1896 aa18.64■□□□□ 0.57
LINC00535-201ENST00000501400 DRGXA6NNA5 263 aa18.63■□□□□ 0.57
LINC00535-201ENST00000501400 ERI2A8K979 691 aaKnown RBP18.63■□□□□ 0.57
LINC00535-201ENST00000501400 ALDH1A2O94788 518 aa18.63■□□□□ 0.57
LINC00535-201ENST00000501400 PEX11BO96011 259 aa18.63■□□□□ 0.57
LINC00535-201ENST00000501400 URODP06132 367 aa18.63■□□□□ 0.57
LINC00535-201ENST00000501400 LINC00271P0C7V0 271 aa18.63■□□□□ 0.57
LINC00535-201ENST00000501400 RAB33AQ14088 237 aa18.63■□□□□ 0.57
LINC00535-201ENST00000501400 NUGGCQ68CJ6 796 aa18.63■□□□□ 0.57
LINC00535-201ENST00000501400 OTOP2Q7RTS6 562 aa18.63■□□□□ 0.57
LINC00535-201ENST00000501400 SLC26A11Q86WA9 606 aa18.63■□□□□ 0.57
LINC00535-201ENST00000501400 LRRC6Q86X45 466 aa18.63■□□□□ 0.57
LINC00535-201ENST00000501400 CIR1Q86X95 450 aaPredicted RBP18.63■□□□□ 0.57
LINC00535-201ENST00000501400 TMEM199Q8N511 208 aa18.63■□□□□ 0.57
LINC00535-201ENST00000501400 PDZD8Q8NEN9 1154 aa18.63■□□□□ 0.57
LINC00535-201ENST00000501400 MYRFLQ96LU7 910 aa18.63■□□□□ 0.57
LINC00535-201ENST00000501400 HBS1LQ9Y450 684 aaKnown RBP18.63■□□□□ 0.57
LINC00535-201ENST00000501400 MYLKQ15746 1914 aa18.63■□□□□ 0.57
LINC00535-201ENST00000501400 CHD5Q8TDI0 1954 aa18.63■□□□□ 0.57
LINC00535-201ENST00000501400 GOLGA6L7A0A1B0GV03 622 aa18.62■□□□□ 0.57
LINC00535-201ENST00000501400 BAIAP3O94812 1187 aa18.62■□□□□ 0.57
LINC00535-201ENST00000501400 HLA-DQB2P05538 268 aa18.62■□□□□ 0.57
LINC00535-201ENST00000501400 PGAM1P18669 254 aa18.62■□□□□ 0.57
LINC00535-201ENST00000501400 KRT4P19013 534 aa18.62■□□□□ 0.57
LINC00535-201ENST00000501400 DNAJB2P25686 324 aa18.62■□□□□ 0.57
LINC00535-201ENST00000501400 NDST2P52849 883 aa18.62■□□□□ 0.57
LINC00535-201ENST00000501400 SLC18A1P54219 525 aa18.62■□□□□ 0.57
LINC00535-201ENST00000501400 CRYMQ14894 314 aa18.62■□□□□ 0.57
LINC00535-201ENST00000501400 CASC4Q6P4E1 433 aa18.62■□□□□ 0.57
LINC00535-201ENST00000501400 C16orf59Q7L2K0 433 aa18.62■□□□□ 0.57
LINC00535-201ENST00000501400 CTAGE3PQ8IX95 158 aa18.62■□□□□ 0.57
LINC00535-201ENST00000501400 GDAP1Q8TB36 358 aa18.62■□□□□ 0.57
LINC00535-201ENST00000501400 HMCESQ96FZ2 354 aa18.62■□□□□ 0.57
LINC00535-201ENST00000501400 ZNF512Q96ME7 567 aaPredicted RBP18.62■□□□□ 0.57
LINC00535-201ENST00000501400 YME1L1Q96TA2 773 aa18.62■□□□□ 0.57
LINC00535-201ENST00000501400 UBP1Q9NZI7 540 aa18.62■□□□□ 0.57
LINC00535-201ENST00000501400 DNMT3LQ9UJW3 386 aa18.62■□□□□ 0.57
LINC00535-201ENST00000501400 ZNF180Q9UJW8 692 aa18.62■□□□□ 0.57
LINC00535-201ENST00000501400 SMG5Q9UPR3 1016 aaKnown RBP18.62■□□□□ 0.57
LINC00535-201ENST00000501400 COCHO43405 550 aa18.62■□□□□ 0.57
LINC00535-201ENST00000501400 TIGD7Q6NT04 549 aaPredicted RBP18.62■□□□□ 0.57
LINC00535-201ENST00000501400 CYS1Q717R9 158 aa18.62■□□□□ 0.57
LINC00535-201ENST00000501400 CHSY1Q86X52 802 aa18.62■□□□□ 0.57
LINC00535-201ENST00000501400 SPATA22Q8NHS9 363 aa18.62■□□□□ 0.57
LINC00535-201ENST00000501400 CKAP2Q8WWK9 683 aa18.62■□□□□ 0.57
LINC00535-201ENST00000501400 CDK5RAP1Q96SZ6 601 aaKnown RBP18.62■□□□□ 0.57
LINC00535-201ENST00000501400 SSU72Q9NP77 194 aaKnown RBP18.62■□□□□ 0.57
LINC00535-201ENST00000501400 NKIRAS1Q9NYS0 192 aa18.62■□□□□ 0.57
LINC00535-201ENST00000501400 IPO11Q9UI26 975 aaKnown RBP18.62■□□□□ 0.57
LINC00535-201ENST00000501400 IQANK1A0A1B0GTG1 560 aa18.61■□□□□ 0.57
LINC00535-201ENST00000501400 ASMTLO95671 621 aa18.61■□□□□ 0.57
LINC00535-201ENST00000501400 RPA3P35244 121 aaPredicted RBP18.61■□□□□ 0.57
LINC00535-201ENST00000501400 ATP5C1P36542 298 aaKnown RBP18.61■□□□□ 0.57
LINC00535-201ENST00000501400 KPNA1P52294 538 aaPredicted RBP18.61■□□□□ 0.57
LINC00535-201ENST00000501400 LBX1P52954 281 aa18.61■□□□□ 0.57
LINC00535-201ENST00000501400 NIPAL4Q0D2K0 466 aa18.61■□□□□ 0.57
LINC00535-201ENST00000501400 PLD1Q13393 1074 aa18.61■□□□□ 0.57
LINC00535-201ENST00000501400 KLHDC10Q6PID8 442 aa18.61■□□□□ 0.57
LINC00535-201ENST00000501400 SH2D5Q6ZV89 423 aa18.61■□□□□ 0.57
LINC00535-201ENST00000501400 LRRC49Q8IUZ0 686 aa18.61■□□□□ 0.57
LINC00535-201ENST00000501400 LRRC34Q8IZ02 419 aa18.61■□□□□ 0.57
LINC00535-201ENST00000501400 TRMT2BQ96GJ1 504 aaKnown RBP18.61■□□□□ 0.57
LINC00535-201ENST00000501400 SGSM3Q96HU1 749 aa18.61■□□□□ 0.57
LINC00535-201ENST00000501400 SERAC1Q96JX3 654 aa18.61■□□□□ 0.57
LINC00535-201ENST00000501400 FCRL5Q96RD9 977 aa18.61■□□□□ 0.57
LINC00535-201ENST00000501400 KLF6Q99612 283 aaPredicted RBP18.61■□□□□ 0.57
LINC00535-201ENST00000501400 APOL2Q9BQE5 337 aa18.61■□□□□ 0.57
LINC00535-201ENST00000501400 LRRC40Q9H9A6 602 aa18.61■□□□□ 0.57
LINC00535-201ENST00000501400 GLOD4Q9HC38 313 aa18.61■□□□□ 0.57
LINC00535-201ENST00000501400 IL23AQ9NPF7 189 aa18.61■□□□□ 0.57
LINC00535-201ENST00000501400 SLC17A6Q9P2U8 582 aa18.61■□□□□ 0.57
LINC00535-201ENST00000501400 IKBKGQ9Y6K9 419 aa18.61■□□□□ 0.57
LINC00535-201ENST00000501400 TACR2P21452 398 aa18.61■□□□□ 0.57
LINC00535-201ENST00000501400 SLC6A4P31645 630 aa18.61■□□□□ 0.57
LINC00535-201ENST00000501400 FAM133BQ5BKY9 247 aaKnown RBP18.61■□□□□ 0.57
LINC00535-201ENST00000501400 CCNJLQ8IV13 435 aa18.61■□□□□ 0.57
LINC00535-201ENST00000501400 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.61■□□□□ 0.57
LINC00535-201ENST00000501400 DYDC1Q8WWB3 177 aa18.61■□□□□ 0.57
LINC00535-201ENST00000501400 RPRD1AQ96P16 312 aaPredicted RBP18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms