RNA–Protein interactions for RNA: ENST00000493711.1

SNX17-208, Transcript of sorting nexin 17, humanhuman

TSL 3

Gene SNX17, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-208ENST00000493711 TFAP2DQ7Z6R9 452 aa12.75□□□□□ -0.37
SNX17-208ENST00000493711 ALYREFQ86V81 257 aaKnown RBP12.75□□□□□ -0.37
SNX17-208ENST00000493711 PLD5Q8N7P1 536 aa12.75□□□□□ -0.37
SNX17-208ENST00000493711 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.75□□□□□ -0.37
SNX17-208ENST00000493711 CCDC26Q8TAB7 109 aa12.75□□□□□ -0.37
SNX17-208ENST00000493711 ZNF592Q92610 1267 aa12.75□□□□□ -0.37
SNX17-208ENST00000493711 HAUS1Q96CS2 278 aa12.75□□□□□ -0.37
SNX17-208ENST00000493711 MYEOVQ96EZ4 313 aa12.75□□□□□ -0.37
SNX17-208ENST00000493711 PSMB7Q99436 277 aa12.75□□□□□ -0.37
SNX17-208ENST00000493711 HEMGNQ9BXL5 484 aa12.75□□□□□ -0.37
SNX17-208ENST00000493711 ZNF212Q9UDV6 495 aa12.75□□□□□ -0.37
SNX17-208ENST00000493711 HPCAL4Q9UM19 191 aa12.75□□□□□ -0.37
SNX17-208ENST00000493711 DUSP12Q9UNI6 340 aa12.75□□□□□ -0.37
SNX17-208ENST00000493711 C2orf16Q68DN1 1984 aa12.74□□□□□ -0.37
SNX17-208ENST00000493711 ZSCAN5CA6NGD5 496 aaPredicted RBP12.74□□□□□ -0.37
SNX17-208ENST00000493711 MAN2B1O00754 1011 aa12.74□□□□□ -0.37
SNX17-208ENST00000493711 CXCR5P32302 372 aa12.74□□□□□ -0.37
SNX17-208ENST00000493711 GJA4P35212 333 aa12.74□□□□□ -0.37
SNX17-208ENST00000493711 SGSHP51688 502 aa12.74□□□□□ -0.37
SNX17-208ENST00000493711 GEMIN4P57678 1058 aaKnown RBP12.74□□□□□ -0.37
SNX17-208ENST00000493711 SULT2A1Q06520 285 aa12.74□□□□□ -0.37
SNX17-208ENST00000493711 ZNF33AQ06730 810 aa12.74□□□□□ -0.37
SNX17-208ENST00000493711 TNK2Q07912 1038 aa12.74□□□□□ -0.37
SNX17-208ENST00000493711 KLF1Q13351 362 aaPredicted RBP12.74□□□□□ -0.37
SNX17-208ENST00000493711 XRCC4Q13426 336 aa12.74□□□□□ -0.37
SNX17-208ENST00000493711 WHAMMP3Q1A5X7 153 aa12.74□□□□□ -0.37
SNX17-208ENST00000493711 AFMIDQ63HM1 303 aa12.74□□□□□ -0.37
SNX17-208ENST00000493711 NCBP2-AS2Q69YL0 99 aa12.74□□□□□ -0.37
SNX17-208ENST00000493711 ANKS1BQ7Z6G8 1248 aa12.74□□□□□ -0.37
SNX17-208ENST00000493711 METTL3Q86U44 580 aaKnown RBP12.74□□□□□ -0.37
SNX17-208ENST00000493711 CIR1Q86X95 450 aaPredicted RBP12.74□□□□□ -0.37
SNX17-208ENST00000493711 ETFBKMTQ8IXQ9 262 aa12.74□□□□□ -0.37
SNX17-208ENST00000493711 GJD3Q8N144 294 aa12.74□□□□□ -0.37
SNX17-208ENST00000493711 AHI1Q8N157 1196 aa12.74□□□□□ -0.37
SNX17-208ENST00000493711 BHMTQ93088 406 aa12.74□□□□□ -0.37
SNX17-208ENST00000493711 SHDQ96IW2 340 aa12.74□□□□□ -0.37
SNX17-208ENST00000493711 PNKPQ96T60 521 aa12.74□□□□□ -0.37
SNX17-208ENST00000493711 C2orf49Q9BVC5 232 aaPredicted RBP12.74□□□□□ -0.37
SNX17-208ENST00000493711 MUC3BQ9H195 1237 aa12.74□□□□□ -0.37
SNX17-208ENST00000493711 DNAJC17Q9NVM6 304 aaKnown RBP12.74□□□□□ -0.37
SNX17-208ENST00000493711 HAUS2Q9NVX0 235 aa12.74□□□□□ -0.37
SNX17-208ENST00000493711 PLK2Q9NYY3 685 aa12.74□□□□□ -0.37
SNX17-208ENST00000493711 GTSE1Q9NYZ3 720 aa12.74□□□□□ -0.37
SNX17-208ENST00000493711 CDC23Q9UJX2 597 aa12.74□□□□□ -0.37
SNX17-208ENST00000493711 GGA2Q9UJY4 613 aa12.74□□□□□ -0.37
SNX17-208ENST00000493711 HACD1B0YJ81 288 aa12.73□□□□□ -0.37
SNX17-208ENST00000493711 RASA4BC9J798 803 aa12.73□□□□□ -0.37
SNX17-208ENST00000493711 PPP1R12AO14974 1030 aaPredicted RBP12.73□□□□□ -0.37
SNX17-208ENST00000493711 MTSS1O43312 755 aa12.73□□□□□ -0.37
SNX17-208ENST00000493711 RASA4O43374 803 aa12.73□□□□□ -0.37
SNX17-208ENST00000493711 GPR37L1O60883 481 aa12.73□□□□□ -0.37
SNX17-208ENST00000493711 TULP3O75386 442 aa12.73□□□□□ -0.37
SNX17-208ENST00000493711 URI1O94763 535 aaPredicted RBP12.73□□□□□ -0.37
SNX17-208ENST00000493711 ASLP04424 464 aa12.73□□□□□ -0.37
SNX17-208ENST00000493711 PABPC1P11940 636 aaKnown RBP12.73□□□□□ -0.37
SNX17-208ENST00000493711 GRIA2P42262 883 aa12.73□□□□□ -0.37
SNX17-208ENST00000493711 IRAK1P51617 712 aa12.73□□□□□ -0.37
SNX17-208ENST00000493711 DYNLT1P63172 113 aa12.73□□□□□ -0.37
SNX17-208ENST00000493711 PRKCQQ04759 706 aa12.73□□□□□ -0.37
SNX17-208ENST00000493711 CKAP4Q07065 602 aaKnown RBP12.73□□□□□ -0.37
SNX17-208ENST00000493711 SLC20A2Q08357 652 aa12.73□□□□□ -0.37
SNX17-208ENST00000493711 EIF4HQ15056 248 aaKnown RBP12.73□□□□□ -0.37
SNX17-208ENST00000493711 DNTTIP2Q5QJE6 756 aaKnown RBP12.73□□□□□ -0.37
SNX17-208ENST00000493711 RNF219Q5W0B1 726 aaPredicted RBP12.73□□□□□ -0.37
SNX17-208ENST00000493711 CXorf57Q6NSI4 855 aaKnown RBP12.73□□□□□ -0.37
SNX17-208ENST00000493711 KIAA0907Q7Z7F0 614 aaPredicted RBP12.73□□□□□ -0.37
SNX17-208ENST00000493711 RNF135Q8IUD6 432 aa12.73□□□□□ -0.37
SNX17-208ENST00000493711 DCAF4L2Q8NA75 395 aa12.73□□□□□ -0.37
SNX17-208ENST00000493711 ST13P5Q8NFI4 369 aaPredicted RBP12.73□□□□□ -0.37
SNX17-208ENST00000493711 COG1Q8WTW3 980 aa12.73□□□□□ -0.37
SNX17-208ENST00000493711 ARHGEF2Q92974 986 aaKnown RBP12.73□□□□□ -0.37
SNX17-208ENST00000493711 FATE1Q969F0 183 aa12.73□□□□□ -0.37
SNX17-208ENST00000493711 ACDQ96AP0 544 aa12.73□□□□□ -0.37
SNX17-208ENST00000493711 P2RY13Q9BPV8 354 aa12.73□□□□□ -0.37
SNX17-208ENST00000493711 FEM1AQ9BSK4 669 aa12.73□□□□□ -0.37
SNX17-208ENST00000493711 LRRC19Q9H756 370 aa12.73□□□□□ -0.37
SNX17-208ENST00000493711 ABCB8Q9NUT2 735 aa12.73□□□□□ -0.37
SNX17-208ENST00000493711 ETNK2Q9NVF9 386 aa12.73□□□□□ -0.37
SNX17-208ENST00000493711 DTLQ9NZJ0 730 aa12.73□□□□□ -0.37
SNX17-208ENST00000493711 WNT16Q9UBV4 365 aa12.73□□□□□ -0.37
SNX17-208ENST00000493711 VPS28Q9UK41 221 aa12.73□□□□□ -0.37
SNX17-208ENST00000493711 HEY1Q9Y5J3 304 aa12.73□□□□□ -0.37
SNX17-208ENST00000493711 PIAS3Q9Y6X2 628 aa12.73□□□□□ -0.37
SNX17-208ENST00000493711 OBSL1O75147 1896 aa12.73□□□□□ -0.37
SNX17-208ENST00000493711 ANAPC1Q9H1A4 1944 aa12.72□□□□□ -0.37
SNX17-208ENST00000493711 NUP210Q8TEM1 1887 aaPredicted RBP12.72□□□□□ -0.37
SNX17-208ENST00000493711 A0A0A0MRY4 1105 aa12.72□□□□□ -0.37
SNX17-208ENST00000493711 SPECC1L-ADORA2AF8WAN1 911 aa12.72□□□□□ -0.37
SNX17-208ENST00000493711 MCF2LO15068 1137 aa12.72□□□□□ -0.37
SNX17-208ENST00000493711 NPC1O15118 1278 aa12.72□□□□□ -0.37
SNX17-208ENST00000493711 HRO43593 1189 aa12.72□□□□□ -0.37
SNX17-208ENST00000493711 APODP05090 189 aa12.72□□□□□ -0.37
SNX17-208ENST00000493711 ATP5BP06576 529 aaKnown RBP12.72□□□□□ -0.37
SNX17-208ENST00000493711 CISD3P0C7P0 127 aa12.72□□□□□ -0.37
SNX17-208ENST00000493711 TNFRSF4P43489 277 aa12.72□□□□□ -0.37
SNX17-208ENST00000493711 GALNT2Q10471 571 aa12.72□□□□□ -0.37
SNX17-208ENST00000493711 LMAN2Q12907 356 aa12.72□□□□□ -0.37
SNX17-208ENST00000493711 SERINC3Q13530 473 aa12.72□□□□□ -0.37
SNX17-208ENST00000493711 NOMO1Q15155 1222 aa12.72□□□□□ -0.37
SNX17-208ENST00000493711 CCNG2Q16589 344 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms