RNA–Protein interactions for RNA: ENST00000493683.5

RNF40-203, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 5,371 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-203ENST00000493683 MAGEC3Q8TD91 643 aa20.45■□□□□ 0.86
RNF40-203ENST00000493683 KIAA1683Q9H0B3 1180 aa20.45■□□□□ 0.86
RNF40-203ENST00000493683 CDHR5Q9HBB8 845 aa20.45■□□□□ 0.86
RNF40-203ENST00000493683 MBD2Q9UBB5 411 aa20.45■□□□□ 0.86
RNF40-203ENST00000493683 INVSQ9Y283 1065 aa20.45■□□□□ 0.86
RNF40-203ENST00000493683 CYP3A4P08684 503 aa20.45■□□□□ 0.86
RNF40-203ENST00000493683 AMPD1P23109 780 aa20.45■□□□□ 0.86
RNF40-203ENST00000493683 FBXO16Q8IX29 292 aaPredicted RBP20.45■□□□□ 0.86
RNF40-203ENST00000493683 ZNF483Q8TF39 744 aaPredicted RBP20.45■□□□□ 0.86
RNF40-203ENST00000493683 FAM136AQ96C01 138 aa20.45■□□□□ 0.86
RNF40-203ENST00000493683 XPNPEP3Q9NQH7 507 aa20.45■□□□□ 0.86
RNF40-203ENST00000493683 ETNK2Q9NVF9 386 aa20.45■□□□□ 0.86
RNF40-203ENST00000493683 CBX6O95503 412 aa20.45■□□□□ 0.86
RNF40-203ENST00000493683 KDELR1P24390 212 aa20.45■□□□□ 0.86
RNF40-203ENST00000493683 LRPAP1P30533 357 aa20.45■□□□□ 0.86
RNF40-203ENST00000493683 SPIRE1Q08AE8 756 aa20.45■□□□□ 0.86
RNF40-203ENST00000493683 PREPLQ4J6C6 727 aaPredicted RBP20.45■□□□□ 0.86
RNF40-203ENST00000493683 MZT2BQ6NZ67 158 aa20.45■□□□□ 0.86
RNF40-203ENST00000493683 C16orf62Q7Z3J2 963 aa20.45■□□□□ 0.86
RNF40-203ENST00000493683 SYTL1Q8IYJ3 562 aa20.45■□□□□ 0.86
RNF40-203ENST00000493683 RDH11Q8TC12 318 aa20.45■□□□□ 0.86
RNF40-203ENST00000493683 APBA2Q99767 749 aa20.45■□□□□ 0.86
RNF40-203ENST00000493683 A0A088AWK7 358 aa20.45■□□□□ 0.86
RNF40-203ENST00000493683 H3BRB1 525 aa20.45■□□□□ 0.86
RNF40-203ENST00000493683 ALDH2P05091 517 aa20.45■□□□□ 0.86
RNF40-203ENST00000493683 ZNF10P21506 573 aaPredicted RBP20.45■□□□□ 0.86
RNF40-203ENST00000493683 TNK2Q07912 1038 aa20.45■□□□□ 0.86
RNF40-203ENST00000493683 CYP2A13Q16696 494 aa20.45■□□□□ 0.86
RNF40-203ENST00000493683 UNC93AQ86WB7 457 aa20.45■□□□□ 0.86
RNF40-203ENST00000493683 CELF6Q96J87 481 aaKnown RBP20.45■□□□□ 0.86
RNF40-203ENST00000493683 HGH1Q9BTY7 390 aa20.45■□□□□ 0.86
RNF40-203ENST00000493683 TUT1Q9H6E5 874 aaKnown RBP20.45■□□□□ 0.86
RNF40-203ENST00000493683 SALL3Q9BXA9 1300 aa20.44■□□□□ 0.86
RNF40-203ENST00000493683 CACTIN-AS1Q8N1I8 211 aa20.44■□□□□ 0.86
RNF40-203ENST00000493683 STAG3L4Q8TBR4 150 aa20.44■□□□□ 0.86
RNF40-203ENST00000493683 PRMT6Q96LA8 375 aaPredicted RBP20.44■□□□□ 0.86
RNF40-203ENST00000493683 UBAP1Q9NZ09 502 aa20.44■□□□□ 0.86
RNF40-203ENST00000493683 CDH9Q9ULB4 789 aa20.44■□□□□ 0.86
RNF40-203ENST00000493683 NCANO14594 1321 aa20.44■□□□□ 0.86
RNF40-203ENST00000493683 UMODL1Q5DID0 1318 aa20.44■□□□□ 0.86
RNF40-203ENST00000493683 H3BN98 237 aa20.44■□□□□ 0.86
RNF40-203ENST00000493683 PIGNO95427 931 aa20.44■□□□□ 0.86
RNF40-203ENST00000493683 LTA4HP09960 611 aaKnown RBP20.44■□□□□ 0.86
RNF40-203ENST00000493683 TPH1P17752 444 aa20.44■□□□□ 0.86
RNF40-203ENST00000493683 HDAC7Q8WUI4 952 aa20.44■□□□□ 0.86
RNF40-203ENST00000493683 UBE2E3Q969T4 207 aa20.44■□□□□ 0.86
RNF40-203ENST00000493683 PTCD3Q96EY7 689 aaKnown RBP20.44■□□□□ 0.86
RNF40-203ENST00000493683 TEKT5Q96M29 485 aa20.44■□□□□ 0.86
RNF40-203ENST00000493683 FAM126AQ9BYI3 521 aaPredicted RBP20.44■□□□□ 0.86
RNF40-203ENST00000493683 CCDC167Q9P0B6 97 aa20.44■□□□□ 0.86
RNF40-203ENST00000493683 UXTQ9UBK9 157 aaPredicted RBP20.44■□□□□ 0.86
RNF40-203ENST00000493683 RPS6KA6Q9UK32 745 aa20.44■□□□□ 0.86
RNF40-203ENST00000493683 CORO2BQ9UQ03 480 aa20.44■□□□□ 0.86
RNF40-203ENST00000493683 PCDHA11Q9Y5I1 949 aa20.44■□□□□ 0.86
RNF40-203ENST00000493683 ZSCAN5CA6NGD5 496 aaPredicted RBP20.44■□□□□ 0.86
RNF40-203ENST00000493683 CYP1A2P05177 515 aa20.44■□□□□ 0.86
RNF40-203ENST00000493683 ALOX12P18054 663 aa20.44■□□□□ 0.86
RNF40-203ENST00000493683 FLT3P36888 993 aa20.44■□□□□ 0.86
RNF40-203ENST00000493683 PRAMEF18Q5VWM3 479 aa20.44■□□□□ 0.86
RNF40-203ENST00000493683 GPSM1Q86YR5 675 aa20.44■□□□□ 0.86
RNF40-203ENST00000493683 PSTKQ8IV42 348 aaKnown RBP20.44■□□□□ 0.86
RNF40-203ENST00000493683 PIF1Q9H611 641 aa20.44■□□□□ 0.86
RNF40-203ENST00000493683 TCRBV5S4A2TA0A5A2 114 aa20.44■□□□□ 0.86
RNF40-203ENST00000493683 BTN3A1O00481 513 aa20.44■□□□□ 0.86
RNF40-203ENST00000493683 YBX3P16989 372 aaKnown RBP eCLIP20.44■□□□□ 0.861e-7■□□□□ 11.3
RNF40-203ENST00000493683 POLR2LP62875 67 aaKnown RBP20.44■□□□□ 0.86
RNF40-203ENST00000493683 VN1R5Q7Z5H4 357 aa20.44■□□□□ 0.86
RNF40-203ENST00000493683 SH3RF1Q7Z6J0 888 aa20.44■□□□□ 0.86
RNF40-203ENST00000493683 LRRC49Q8IUZ0 686 aa20.44■□□□□ 0.86
RNF40-203ENST00000493683 POU5F2Q8N7G0 328 aa20.44■□□□□ 0.86
RNF40-203ENST00000493683 PRCCQ92733 491 aaPredicted RBP20.44■□□□□ 0.86
RNF40-203ENST00000493683 BHMTQ93088 406 aa20.44■□□□□ 0.86
RNF40-203ENST00000493683 ADI1Q9BV57 179 aa20.44■□□□□ 0.86
RNF40-203ENST00000493683 POLR1EQ9GZS1 481 aaKnown RBP20.44■□□□□ 0.86
RNF40-203ENST00000493683 TMEM134Q9H6X4 195 aa20.44■□□□□ 0.86
RNF40-203ENST00000493683 A0A0A0MRY4 1105 aa20.43■□□□□ 0.86
RNF40-203ENST00000493683 ZBTB14O43829 449 aa20.43■□□□□ 0.86
RNF40-203ENST00000493683 VAV1P15498 845 aa20.43■□□□□ 0.86
RNF40-203ENST00000493683 IL2P60568 153 aa20.43■□□□□ 0.86
RNF40-203ENST00000493683 CDC42P60953 191 aa20.43■□□□□ 0.86
RNF40-203ENST00000493683 BNIP2Q12982 314 aa20.43■□□□□ 0.86
RNF40-203ENST00000493683 PLCL1Q15111 1095 aa20.43■□□□□ 0.86
RNF40-203ENST00000493683 DEFB106AQ8N104 65 aa20.43■□□□□ 0.86
RNF40-203ENST00000493683 USP7Q93009 1102 aa20.43■□□□□ 0.86
RNF40-203ENST00000493683 ZKSCAN4Q969J2 545 aaPredicted RBP20.43■□□□□ 0.86
RNF40-203ENST00000493683 TPD52L3Q96J77 140 aa20.43■□□□□ 0.86
RNF40-203ENST00000493683 SPATA13Q96N96 652 aa20.43■□□□□ 0.86
RNF40-203ENST00000493683 DCUN1D5Q9BTE7 237 aa20.43■□□□□ 0.86
RNF40-203ENST00000493683 SNTG2Q9NY99 539 aa20.43■□□□□ 0.86
RNF40-203ENST00000493683 SIK3Q9Y2K2 1263 aa20.43■□□□□ 0.86
RNF40-203ENST00000493683 SETD1BQ9UPS6 1966 aaKnown RBP20.43■□□□□ 0.86
RNF40-203ENST00000493683 TFRCP02786 760 aaKnown RBP20.43■□□□□ 0.86
RNF40-203ENST00000493683 ALDH9A1P49189 494 aa20.43■□□□□ 0.86
RNF40-203ENST00000493683 GRIK4Q16099 956 aa20.43■□□□□ 0.86
RNF40-203ENST00000493683 MED8Q96G25 268 aa20.43■□□□□ 0.86
RNF40-203ENST00000493683 COQ7Q99807 217 aa20.43■□□□□ 0.86
RNF40-203ENST00000493683 LRMDAQ9H2I8 198 aa20.43■□□□□ 0.86
RNF40-203ENST00000493683 FAM237AA0A1B0GTK4 181 aa20.43■□□□□ 0.86
RNF40-203ENST00000493683 SIGLEC16A6NMB1 481 aa20.43■□□□□ 0.86
RNF40-203ENST00000493683 KLRK1P26718 216 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms