RNA–Protein interactions for RNA: ENST00000492455.1

HMGB1P30-201, Transcript of high mobility group box 1 pseudogene 30, humanhuman

BASIC

Gene HMGB1P30, Length 606 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P30-201ENST00000492455 LIFRP42702 1097 aa3.21□□□□□ -1.9
HMGB1P30-201ENST00000492455 MVDP53602 400 aa3.21□□□□□ -1.9
HMGB1P30-201ENST00000492455 ADPRHP54922 357 aa3.21□□□□□ -1.9
HMGB1P30-201ENST00000492455 CFHR1Q03591 330 aa3.21□□□□□ -1.9
HMGB1P30-201ENST00000492455 TLE2Q04725 743 aa3.21□□□□□ -1.9
HMGB1P30-201ENST00000492455 UBE3AQ05086 875 aa3.21□□□□□ -1.9
HMGB1P30-201ENST00000492455 POU5F1BQ06416 359 aa3.21□□□□□ -1.9
HMGB1P30-201ENST00000492455 KIAA1755Q5JYT7 1200 aa3.21□□□□□ -1.9
HMGB1P30-201ENST00000492455 CBWD5Q5RIA9 395 aa3.21□□□□□ -1.9
HMGB1P30-201ENST00000492455 CC2D1BQ5T0F9 858 aaKnown RBP3.21□□□□□ -1.9
HMGB1P30-201ENST00000492455 MEX3CQ5U5Q3 659 aaKnown RBP3.21□□□□□ -1.9
HMGB1P30-201ENST00000492455 MTFR2Q6P444 385 aa3.21□□□□□ -1.9
HMGB1P30-201ENST00000492455 TMEM88Q6PEY1 159 aa3.21□□□□□ -1.9
HMGB1P30-201ENST00000492455 ZNF813Q6ZN06 617 aa3.21□□□□□ -1.9
HMGB1P30-201ENST00000492455 RBM44Q6ZP01 1051 aaKnown RBP3.21□□□□□ -1.9
HMGB1P30-201ENST00000492455 RNF144BQ7Z419 303 aa3.21□□□□□ -1.9
HMGB1P30-201ENST00000492455 HEATR4Q86WZ0 1026 aa3.21□□□□□ -1.9
HMGB1P30-201ENST00000492455 SCN4BQ8IWT1 228 aa3.21□□□□□ -1.9
HMGB1P30-201ENST00000492455 PAQR4Q8N4S7 273 aaPredicted RBP3.21□□□□□ -1.9
HMGB1P30-201ENST00000492455 NANOGP1Q8N7R0 232 aa3.21□□□□□ -1.9
HMGB1P30-201ENST00000492455 SRFBP1Q8NEF9 429 aaKnown RBP3.21□□□□□ -1.9
HMGB1P30-201ENST00000492455 ZFPM2Q8WW38 1151 aa3.21□□□□□ -1.9
HMGB1P30-201ENST00000492455 HTRA1Q92743 480 aa3.21□□□□□ -1.9
HMGB1P30-201ENST00000492455 MASTLQ96GX5 879 aa3.21□□□□□ -1.9
HMGB1P30-201ENST00000492455 RBM17Q96I25 401 aaKnown RBP3.21□□□□□ -1.9
HMGB1P30-201ENST00000492455 C5orf34Q96MH7 638 aa3.21□□□□□ -1.9
HMGB1P30-201ENST00000492455 CLSTN3Q9BQT9 956 aa3.21□□□□□ -1.9
HMGB1P30-201ENST00000492455 AGXT2Q9BYV1 514 aa3.21□□□□□ -1.9
HMGB1P30-201ENST00000492455 SFXN1Q9H9B4 322 aa3.21□□□□□ -1.9
HMGB1P30-201ENST00000492455 PDGFCQ9NRA1 345 aa3.21□□□□□ -1.9
HMGB1P30-201ENST00000492455 CD207Q9UJ71 328 aa3.21□□□□□ -1.9
HMGB1P30-201ENST00000492455 BAG5Q9UL15 447 aa3.21□□□□□ -1.9
HMGB1P30-201ENST00000492455 SERINC4A6NH21 518 aa3.2□□□□□ -1.9
HMGB1P30-201ENST00000492455 SAC3D1A6NKF1 404 aa3.2□□□□□ -1.9
HMGB1P30-201ENST00000492455 MCIDASD6RGH6 385 aa3.2□□□□□ -1.9
HMGB1P30-201ENST00000492455 DSCR3O14972 297 aa3.2□□□□□ -1.9
HMGB1P30-201ENST00000492455 KLK10O43240 276 aa3.2□□□□□ -1.9
HMGB1P30-201ENST00000492455 OAZ2O95190 189 aa3.2□□□□□ -1.9
HMGB1P30-201ENST00000492455 PLAUP00749 431 aa3.2□□□□□ -1.9
HMGB1P30-201ENST00000492455 WNT1P04628 370 aa3.2□□□□□ -1.9
HMGB1P30-201ENST00000492455 ENO1P06733 434 aaKnown RBP3.2□□□□□ -1.9
HMGB1P30-201ENST00000492455 SLC3A2P08195 630 aaKnown RBP3.2□□□□□ -1.9
HMGB1P30-201ENST00000492455 RPS6KB1P23443 525 aa3.2□□□□□ -1.9
HMGB1P30-201ENST00000492455 ARHGAP25P42331 645 aa3.2□□□□□ -1.9
HMGB1P30-201ENST00000492455 PCP4P48539 62 aa3.2□□□□□ -1.9
HMGB1P30-201ENST00000492455 RHAGQ02094 409 aa3.2□□□□□ -1.9
HMGB1P30-201ENST00000492455 PGM5Q15124 567 aa3.2□□□□□ -1.9
HMGB1P30-201ENST00000492455 DLGAP5Q15398 846 aa3.2□□□□□ -1.9
HMGB1P30-201ENST00000492455 PFKFB3Q16875 520 aaPredicted RBP3.2□□□□□ -1.9
HMGB1P30-201ENST00000492455 CERKLQ49MI3 558 aaPredicted RBP3.2□□□□□ -1.9
HMGB1P30-201ENST00000492455 INTS11Q5TA45 600 aaKnown RBP3.2□□□□□ -1.9
HMGB1P30-201ENST00000492455 SLC9C2Q5TAH2 1124 aa3.2□□□□□ -1.9
HMGB1P30-201ENST00000492455 ATG16L1Q676U5 607 aa3.2□□□□□ -1.9
HMGB1P30-201ENST00000492455 NAPEPLDQ6IQ20 393 aa3.2□□□□□ -1.9
HMGB1P30-201ENST00000492455 ANO7Q6IWH7 933 aa3.2□□□□□ -1.9
HMGB1P30-201ENST00000492455 DHRS13Q6UX07 377 aa3.2□□□□□ -1.9
HMGB1P30-201ENST00000492455 MMS22LQ6ZRQ5 1243 aa3.2□□□□□ -1.9
HMGB1P30-201ENST00000492455 ESX1Q8N693 406 aa3.2□□□□□ -1.9
HMGB1P30-201ENST00000492455 ENDOVQ8N8Q3 282 aaKnown RBP3.2□□□□□ -1.9
HMGB1P30-201ENST00000492455 ARL14EPQ8N8R7 260 aaPredicted RBP3.2□□□□□ -1.9
HMGB1P30-201ENST00000492455 USP38Q8NB14 1042 aa3.2□□□□□ -1.9
HMGB1P30-201ENST00000492455 LSM14AQ8ND56 463 aaKnown RBP3.2□□□□□ -1.9
HMGB1P30-201ENST00000492455 IP6K1Q92551 441 aa3.2□□□□□ -1.9
HMGB1P30-201ENST00000492455 KAT2AQ92830 837 aa3.2□□□□□ -1.9
HMGB1P30-201ENST00000492455 RNFT2Q96EX2 444 aa3.2□□□□□ -1.9
HMGB1P30-201ENST00000492455 ABHD14AQ9BUJ0 271 aa3.2□□□□□ -1.9
HMGB1P30-201ENST00000492455 NOD2Q9HC29 1040 aa3.2□□□□□ -1.9
HMGB1P30-201ENST00000492455 Q9N2J8 555 aa3.2□□□□□ -1.9
HMGB1P30-201ENST00000492455 WASH6PQ9NQA3 447 aa3.2□□□□□ -1.9
HMGB1P30-201ENST00000492455 ARL8BQ9NVJ2 186 aa3.2□□□□□ -1.9
HMGB1P30-201ENST00000492455 MTPAPQ9NVV4 582 aaKnown RBP eCLIP3.2□□□□□ -1.9
HMGB1P30-201ENST00000492455 THAP1Q9NVV9 213 aa3.2□□□□□ -1.9
HMGB1P30-201ENST00000492455 TMEM248Q9NWD8 314 aa3.2□□□□□ -1.9
HMGB1P30-201ENST00000492455 TRNAU1APQ9NX07 287 aaKnown RBP3.2□□□□□ -1.9
HMGB1P30-201ENST00000492455 KLHL13Q9P2N7 655 aa3.2□□□□□ -1.9
HMGB1P30-201ENST00000492455 KLQ9UEF7 1012 aa3.2□□□□□ -1.9
HMGB1P30-201ENST00000492455 FBXO4Q9UKT5 387 aa3.2□□□□□ -1.9
HMGB1P30-201ENST00000492455 HSF4Q9ULV5 492 aa3.2□□□□□ -1.9
HMGB1P30-201ENST00000492455 PROCRQ9UNN8 238 aa3.2□□□□□ -1.9
HMGB1P30-201ENST00000492455 DTX4Q9Y2E6 619 aa3.2□□□□□ -1.9
HMGB1P30-201ENST00000492455 AFG3L2Q9Y4W6 797 aa3.2□□□□□ -1.9
HMGB1P30-201ENST00000492455 EMSYQ7Z589 1322 aa3.19□□□□□ -1.9
HMGB1P30-201ENST00000492455 SMIM35A0A1B0GVV1 85 aa3.19□□□□□ -1.9
HMGB1P30-201ENST00000492455 C2CD4BA6NLJ0 364 aa3.19□□□□□ -1.9
HMGB1P30-201ENST00000492455 KCNJ18B7U540 433 aa3.19□□□□□ -1.9
HMGB1P30-201ENST00000492455 PRSS44E7EML9 344 aa3.19□□□□□ -1.9
HMGB1P30-201ENST00000492455 SEPT4O43236 478 aa3.19□□□□□ -1.9
HMGB1P30-201ENST00000492455 HNRNPA1P09651 372 aaKnown RBP eCLIP3.19□□□□□ -1.9
HMGB1P30-201ENST00000492455 AKR1A1P14550 325 aa3.19□□□□□ -1.9
HMGB1P30-201ENST00000492455 CPA1P15085 419 aa3.19□□□□□ -1.9
HMGB1P30-201ENST00000492455 TGM2P21980 687 aa3.19□□□□□ -1.9
HMGB1P30-201ENST00000492455 TYK2P29597 1187 aa3.19□□□□□ -1.9
HMGB1P30-201ENST00000492455 NR1H2P55055 460 aa3.19□□□□□ -1.9
HMGB1P30-201ENST00000492455 LINC00205P59089 165 aa3.19□□□□□ -1.9
HMGB1P30-201ENST00000492455 MTA1Q13330 715 aa3.19□□□□□ -1.9
HMGB1P30-201ENST00000492455 ANKRD1Q15327 319 aa3.19□□□□□ -1.9
HMGB1P30-201ENST00000492455 ANXA2RQ3ZCQ2 193 aa3.19□□□□□ -1.9
HMGB1P30-201ENST00000492455 GXYLT1Q4G148 440 aa3.19□□□□□ -1.9
HMGB1P30-201ENST00000492455 ZNF628Q5EBL2 1059 aa3.19□□□□□ -1.9
HMGB1P30-201ENST00000492455 ARL13AQ5H913 290 aaPredicted RBP3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms