RNA–Protein interactions for RNA: ENST00000491860.1

NUP50-217, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-217ENST00000491860 OR2I1PQ8NGU4 316 aa9.01□□□□□ -0.97
NUP50-217ENST00000491860 BAHD1Q8TBE0 780 aaPredicted RBP9.01□□□□□ -0.97
NUP50-217ENST00000491860 PTPRN2Q92932 1015 aa9.01□□□□□ -0.97
NUP50-217ENST00000491860 C1orf74Q96LT6 269 aa9.01□□□□□ -0.97
NUP50-217ENST00000491860 TUBGCP2Q9BSJ2 902 aa9.01□□□□□ -0.97
NUP50-217ENST00000491860 C2orf49Q9BVC5 232 aaPredicted RBP9.01□□□□□ -0.97
NUP50-217ENST00000491860 RETREG1Q9H6L5 497 aa9.01□□□□□ -0.97
NUP50-217ENST00000491860 WDCPQ9H6R7 721 aa9.01□□□□□ -0.97
NUP50-217ENST00000491860 GDF3Q9NR23 364 aa9.01□□□□□ -0.97
NUP50-217ENST00000491860 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.01□□□□□ -0.97
NUP50-217ENST00000491860 VPS28Q9UK41 221 aa9.01□□□□□ -0.97
NUP50-217ENST00000491860 FNDC3AQ9Y2H6 1198 aaKnown RBP9.01□□□□□ -0.97
NUP50-217ENST00000491860 TBC1D30Q9Y2I9 924 aa9.01□□□□□ -0.97
NUP50-217ENST00000491860 SNX11Q9Y5W9 270 aa9.01□□□□□ -0.97
NUP50-217ENST00000491860 SETXQ7Z333 2677 aaKnown RBP9.01□□□□□ -0.97
NUP50-217ENST00000491860 SYNJ2BP-COX16A0A087WUM0 186 aa9□□□□□ -0.97
NUP50-217ENST00000491860 FAM47DPA6NHR8 397 aa9□□□□□ -0.97
NUP50-217ENST00000491860 TTC34A8MYJ7 566 aa9□□□□□ -0.97
NUP50-217ENST00000491860 M0QYT0 321 aa9□□□□□ -0.97
NUP50-217ENST00000491860 FOXN3O00409 490 aaPredicted RBP9□□□□□ -0.97
NUP50-217ENST00000491860 MCF2LO15068 1137 aa9□□□□□ -0.97
NUP50-217ENST00000491860 IGHV4-34P06331 123 aa9□□□□□ -0.97
NUP50-217ENST00000491860 C1SP09871 688 aa9□□□□□ -0.97
NUP50-217ENST00000491860 ZNF18P17022 549 aa9□□□□□ -0.97
NUP50-217ENST00000491860 CLCN1P35523 988 aa9□□□□□ -0.97
NUP50-217ENST00000491860 PSMD8P48556 350 aa9□□□□□ -0.97
NUP50-217ENST00000491860 CXCR3P49682 368 aa9□□□□□ -0.97
NUP50-217ENST00000491860 CLCN6P51797 869 aa9□□□□□ -0.97
NUP50-217ENST00000491860 ADPRHP54922 357 aa9□□□□□ -0.97
NUP50-217ENST00000491860 FAM193AP78312 1265 aa9□□□□□ -0.97
NUP50-217ENST00000491860 BNC1Q01954 994 aa9□□□□□ -0.97
NUP50-217ENST00000491860 NME3Q13232 169 aa9□□□□□ -0.97
NUP50-217ENST00000491860 RAPGEF1Q13905 1077 aa9□□□□□ -0.97
NUP50-217ENST00000491860 SLC25A52Q3SY17 297 aa9□□□□□ -0.97
NUP50-217ENST00000491860 C6orf118Q5T5N4 469 aa9□□□□□ -0.97
NUP50-217ENST00000491860 NAPEPLDQ6IQ20 393 aa9□□□□□ -0.97
NUP50-217ENST00000491860 CXorf57Q6NSI4 855 aaKnown RBP9□□□□□ -0.97
NUP50-217ENST00000491860 FBXL22Q6P050 247 aa9□□□□□ -0.97
NUP50-217ENST00000491860 NEK5Q6P3R8 708 aa9□□□□□ -0.97
NUP50-217ENST00000491860 GJB7Q6PEY0 223 aa9□□□□□ -0.97
NUP50-217ENST00000491860 ZNF783Q6ZMS7 281 aa9□□□□□ -0.97
NUP50-217ENST00000491860 MMS22LQ6ZRQ5 1243 aa9□□□□□ -0.97
NUP50-217ENST00000491860 SLC47A2Q86VL8 602 aa9□□□□□ -0.97
NUP50-217ENST00000491860 ZSCAN30Q86W11 494 aa9□□□□□ -0.97
NUP50-217ENST00000491860 ERICH1Q86X53 443 aa9□□□□□ -0.97
NUP50-217ENST00000491860 IRF2BP1Q8IU81 584 aa9□□□□□ -0.97
NUP50-217ENST00000491860 PASD1Q8IV76 773 aa9□□□□□ -0.97
NUP50-217ENST00000491860 APCDD1Q8J025 514 aa9□□□□□ -0.97
NUP50-217ENST00000491860 STK40Q8N2I9 435 aa9□□□□□ -0.97
NUP50-217ENST00000491860 CHCHD4Q8N4Q1 142 aa9□□□□□ -0.97
NUP50-217ENST00000491860 WDTC1Q8N5D0 677 aa9□□□□□ -0.97
NUP50-217ENST00000491860 OR14C36Q8NHC7 312 aa9□□□□□ -0.97
NUP50-217ENST00000491860 FAM174AQ8TBP5 190 aa9□□□□□ -0.97
NUP50-217ENST00000491860 NT5C3BQ969T7 300 aa9□□□□□ -0.97
NUP50-217ENST00000491860 FAM131CQ96AQ9 280 aa9□□□□□ -0.97
NUP50-217ENST00000491860 C18orf8Q96DM3 657 aa9□□□□□ -0.97
NUP50-217ENST00000491860 RPL10LQ96L21 214 aaKnown RBP9□□□□□ -0.97
NUP50-217ENST00000491860 CAMK1GQ96NX5 476 aa9□□□□□ -0.97
NUP50-217ENST00000491860 FAM129BQ96TA1 746 aa9□□□□□ -0.97
NUP50-217ENST00000491860 ELF4Q99607 663 aaPredicted RBP9□□□□□ -0.97
NUP50-217ENST00000491860 FEM1AQ9BSK4 669 aa9□□□□□ -0.97
NUP50-217ENST00000491860 MUC3BQ9H195 1237 aa9□□□□□ -0.97
NUP50-217ENST00000491860 NUP62CLQ9H1M0 184 aa9□□□□□ -0.97
NUP50-217ENST00000491860 NEUROG2Q9H2A3 272 aa9□□□□□ -0.97
NUP50-217ENST00000491860 ERVMER34-1Q9H9K5 563 aa9□□□□□ -0.97
NUP50-217ENST00000491860 SIX2Q9NPC8 291 aa9□□□□□ -0.97
NUP50-217ENST00000491860 AASDHPPTQ9NRN7 309 aa9□□□□□ -0.97
NUP50-217ENST00000491860 ARHGEF38Q9NXL2 777 aa9□□□□□ -0.97
NUP50-217ENST00000491860 COX16Q9P0S2 106 aa9□□□□□ -0.97
NUP50-217ENST00000491860 XPO7Q9UIA9 1087 aaKnown RBP9□□□□□ -0.97
NUP50-217ENST00000491860 SLCO3A1Q9UIG8 710 aa9□□□□□ -0.97
NUP50-217ENST00000491860 VANGL2Q9ULK5 521 aa9□□□□□ -0.97
NUP50-217ENST00000491860 HS3ST2Q9Y278 367 aa9□□□□□ -0.97
NUP50-217ENST00000491860 PCDHGA1Q9Y5H4 931 aa9□□□□□ -0.97
NUP50-217ENST00000491860 HS3ST4Q9Y661 456 aa9□□□□□ -0.97
NUP50-217ENST00000491860 COL5A1P20908 1838 aaPredicted RBP9□□□□□ -0.97
NUP50-217ENST00000491860 TMEM131Q92545 1883 aa9□□□□□ -0.97
NUP50-217ENST00000491860 TP53BP1Q12888 1972 aaPredicted RBP8.99□□□□□ -0.97
NUP50-217ENST00000491860 ASH1LQ9NR48 2969 aaKnown RBP8.99□□□□□ -0.97
NUP50-217ENST00000491860 TBC1D3DA0A087WVF3 549 aa8.99□□□□□ -0.97
NUP50-217ENST00000491860 TBC1D3IA0A087WXS9 549 aa8.99□□□□□ -0.97
NUP50-217ENST00000491860 TBC1D3EA0A087X179 549 aa8.99□□□□□ -0.97
NUP50-217ENST00000491860 TBC1D3KA0A087X1G2 549 aa8.99□□□□□ -0.97
NUP50-217ENST00000491860 A0A1B0GTQ1 180 aa8.99□□□□□ -0.97
NUP50-217ENST00000491860 TBC1D3FA6NER0 549 aaPredicted RBP8.99□□□□□ -0.97
NUP50-217ENST00000491860 TBC1D3LB9A6J9 549 aa8.99□□□□□ -0.97
NUP50-217ENST00000491860 PES1O00541 588 aaKnown RBP8.99□□□□□ -0.97
NUP50-217ENST00000491860 LATO43561 262 aa8.99□□□□□ -0.97
NUP50-217ENST00000491860 PLRG1O43660 514 aaKnown RBP8.99□□□□□ -0.97
NUP50-217ENST00000491860 PAGE1O75459 146 aa8.99□□□□□ -0.97
NUP50-217ENST00000491860 GRAP2O75791 330 aa8.99□□□□□ -0.97
NUP50-217ENST00000491860 DKK1O94907 266 aa8.99□□□□□ -0.97
NUP50-217ENST00000491860 PRNPP04156 253 aa8.99□□□□□ -0.97
NUP50-217ENST00000491860 ERBB2P04626 1255 aa8.99□□□□□ -0.97
NUP50-217ENST00000491860 ITGAVP06756 1048 aa8.99□□□□□ -0.97
NUP50-217ENST00000491860 RHOCP08134 193 aa8.99□□□□□ -0.97
NUP50-217ENST00000491860 TBC1D3HP0C7X1 549 aa8.99□□□□□ -0.97
NUP50-217ENST00000491860 CYP11B1P15538 503 aa8.99□□□□□ -0.97
NUP50-217ENST00000491860 ETFBP38117 255 aa8.99□□□□□ -0.97
NUP50-217ENST00000491860 CTSOP43234 321 aaPredicted RBP8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms