RNA–Protein interactions for RNA: ENST00000491128.5

SMPD4-219, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 2,570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-219ENST00000491128 F5H5T6 163 aa14.25□□□□□ -0.13
SMPD4-219ENST00000491128 POC1B-GALNT4F8VUJ3 575 aa14.25□□□□□ -0.13
SMPD4-219ENST00000491128 FGF10O15520 208 aaPredicted RBP14.25□□□□□ -0.13
SMPD4-219ENST00000491128 OPA1O60313 960 aa14.25□□□□□ -0.13
SMPD4-219ENST00000491128 GOLGA6DP0CG33 693 aa14.25□□□□□ -0.13
SMPD4-219ENST00000491128 CCNB1P14635 433 aa14.25□□□□□ -0.13
SMPD4-219ENST00000491128 MX2P20592 715 aa14.25□□□□□ -0.13
SMPD4-219ENST00000491128 GLDCP23378 1020 aa14.25□□□□□ -0.13
SMPD4-219ENST00000491128 CBX2Q14781 532 aaPredicted RBP14.25□□□□□ -0.13
SMPD4-219ENST00000491128 ADAMTS19Q8TE59 1207 aa14.25□□□□□ -0.13
SMPD4-219ENST00000491128 ABHD8Q96I13 439 aa14.25□□□□□ -0.13
SMPD4-219ENST00000491128 APOL5Q9BWW9 433 aa14.25□□□□□ -0.13
SMPD4-219ENST00000491128 LRRC3Q9BY71 257 aa14.25□□□□□ -0.13
SMPD4-219ENST00000491128 TMBIM4Q9HC24 238 aa14.25□□□□□ -0.13
SMPD4-219ENST00000491128 GOLGA6AQ9NYA3 693 aa14.25□□□□□ -0.13
SMPD4-219ENST00000491128 IL1RAPL1Q9NZN1 696 aa14.25□□□□□ -0.13
SMPD4-219ENST00000491128 RSPH14Q9UHP6 348 aa14.25□□□□□ -0.13
SMPD4-219ENST00000491128 IPO11Q9UI26 975 aaKnown RBP14.25□□□□□ -0.13
SMPD4-219ENST00000491128 HCFC2Q9Y5Z7 792 aa14.25□□□□□ -0.13
SMPD4-219ENST00000491128 MAD1L1Q9Y6D9 718 aa14.25□□□□□ -0.13
SMPD4-219ENST00000491128 ALOX15BO15296 676 aa14.25□□□□□ -0.13
SMPD4-219ENST00000491128 CHADO15335 359 aa14.25□□□□□ -0.13
SMPD4-219ENST00000491128 TNRC18O15417 2968 aaPredicted RBP14.25□□□□□ -0.13
SMPD4-219ENST00000491128 COG7P83436 770 aa14.25□□□□□ -0.13
SMPD4-219ENST00000491128 RING1Q06587 406 aa14.25□□□□□ -0.13
SMPD4-219ENST00000491128 TEX44Q53QW1 395 aa14.25□□□□□ -0.13
SMPD4-219ENST00000491128 CES3Q6UWW8 571 aa14.25□□□□□ -0.13
SMPD4-219ENST00000491128 C3orf62Q6ZUJ4 267 aa14.25□□□□□ -0.13
SMPD4-219ENST00000491128 HBS1LQ9Y450 684 aaKnown RBP14.25□□□□□ -0.13
SMPD4-219ENST00000491128 ARHGAP42A6NI28 874 aa14.24□□□□□ -0.13
SMPD4-219ENST00000491128 GOLGA6L10A6NI86 522 aa14.24□□□□□ -0.13
SMPD4-219ENST00000491128 RASA4BC9J798 803 aa14.24□□□□□ -0.13
SMPD4-219ENST00000491128 RASA4O43374 803 aa14.24□□□□□ -0.13
SMPD4-219ENST00000491128 STK10O94804 968 aaKnown RBP14.24□□□□□ -0.13
SMPD4-219ENST00000491128 F7P08709 466 aaPredicted RBP14.24□□□□□ -0.13
SMPD4-219ENST00000491128 NUDT17P0C025 328 aa14.24□□□□□ -0.13
SMPD4-219ENST00000491128 RHOQP17081 205 aa14.24□□□□□ -0.13
SMPD4-219ENST00000491128 CAPN2P17655 700 aa14.24□□□□□ -0.13
SMPD4-219ENST00000491128 GPM6BQ13491 265 aa14.24□□□□□ -0.13
SMPD4-219ENST00000491128 SLC5A9Q2M3M2 681 aa14.24□□□□□ -0.13
SMPD4-219ENST00000491128 ITIH5Q86UX2 942 aa14.24□□□□□ -0.13
SMPD4-219ENST00000491128 HOOK3Q86VS8 718 aa14.24□□□□□ -0.13
SMPD4-219ENST00000491128 UNC5BQ8IZJ1 945 aa14.24□□□□□ -0.13
SMPD4-219ENST00000491128 CYP4X1Q8N118 509 aa14.24□□□□□ -0.13
SMPD4-219ENST00000491128 OR7D4Q8NG98 312 aa14.24□□□□□ -0.13
SMPD4-219ENST00000491128 GDPD5Q8WTR4 605 aa14.24□□□□□ -0.13
SMPD4-219ENST00000491128 ING5Q8WYH8 240 aa14.24□□□□□ -0.13
SMPD4-219ENST00000491128 SLC46A2Q9BY10 475 aa14.24□□□□□ -0.13
SMPD4-219ENST00000491128 PBX4Q9BYU1 374 aa14.24□□□□□ -0.13
SMPD4-219ENST00000491128 ZNF212Q9UDV6 495 aa14.24□□□□□ -0.13
SMPD4-219ENST00000491128 SHROOM3Q8TF72 1996 aa14.24□□□□□ -0.13
SMPD4-219ENST00000491128 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.24□□□□□ -0.13
SMPD4-219ENST00000491128 EPOPA6NHQ4 379 aa14.24□□□□□ -0.13
SMPD4-219ENST00000491128 TPH1P17752 444 aa14.24□□□□□ -0.13
SMPD4-219ENST00000491128 SLC11A2P49281 568 aa14.24□□□□□ -0.13
SMPD4-219ENST00000491128 MAGOHP61326 146 aaKnown RBP14.24□□□□□ -0.13
SMPD4-219ENST00000491128 SLC10A7Q0GE19 358 aa14.24□□□□□ -0.13
SMPD4-219ENST00000491128 CASC4Q6P4E1 433 aa14.24□□□□□ -0.13
SMPD4-219ENST00000491128 POTEHQ6S545 545 aa14.24□□□□□ -0.13
SMPD4-219ENST00000491128 LRIG3Q6UXM1 1119 aa14.24□□□□□ -0.13
SMPD4-219ENST00000491128 TPGS1Q6ZTW0 290 aa14.24□□□□□ -0.13
SMPD4-219ENST00000491128 MICALCLQ6ZW33 695 aa14.24□□□□□ -0.13
SMPD4-219ENST00000491128 PALM2Q8IXS6 379 aa14.24□□□□□ -0.13
SMPD4-219ENST00000491128 OR52K1Q8NGK4 314 aa14.24□□□□□ -0.13
SMPD4-219ENST00000491128 OVCA2Q8WZ82 227 aa14.24□□□□□ -0.13
SMPD4-219ENST00000491128 OXNAD1Q96HP4 312 aaPredicted RBP14.24□□□□□ -0.13
SMPD4-219ENST00000491128 SPON2Q9BUD6 331 aa14.24□□□□□ -0.13
SMPD4-219ENST00000491128 MLPHQ9BV36 600 aaPredicted RBP14.24□□□□□ -0.13
SMPD4-219ENST00000491128 RBM22Q9NW64 420 aaKnown RBP eCLIP14.24□□□□□ -0.13
SMPD4-219ENST00000491128 TMEM248Q9NWD8 314 aa14.24□□□□□ -0.13
SMPD4-219ENST00000491128 DNMT3BQ9UBC3 853 aaKnown RBP14.24□□□□□ -0.13
SMPD4-219ENST00000491128 SSX2IPQ9Y2D8 614 aa14.24□□□□□ -0.13
SMPD4-219ENST00000491128 IGLV3-10A0A075B6K4 115 aa14.23□□□□□ -0.13
SMPD4-219ENST00000491128 RASGRF2O14827 1237 aa14.23□□□□□ -0.13
SMPD4-219ENST00000491128 OPHN1O60890 802 aa14.23□□□□□ -0.13
SMPD4-219ENST00000491128 HLA-DQB2P05538 268 aa14.23□□□□□ -0.13
SMPD4-219ENST00000491128 CREB1P16220 341 aa14.23□□□□□ -0.13
SMPD4-219ENST00000491128 ITKQ08881 620 aa14.23□□□□□ -0.13
SMPD4-219ENST00000491128 SEMA5AQ13591 1074 aa14.23□□□□□ -0.13
SMPD4-219ENST00000491128 POLD3Q15054 466 aaPredicted RBP14.23□□□□□ -0.13
SMPD4-219ENST00000491128 CCDC149Q6ZUS6 474 aa14.23□□□□□ -0.13
SMPD4-219ENST00000491128 TADA2BQ86TJ2 420 aa14.23□□□□□ -0.13
SMPD4-219ENST00000491128 RNF135Q8IUD6 432 aa14.23□□□□□ -0.13
SMPD4-219ENST00000491128 RIN3Q8TB24 985 aa14.23□□□□□ -0.13
SMPD4-219ENST00000491128 MRPS31Q92665 395 aaKnown RBP14.23□□□□□ -0.13
SMPD4-219ENST00000491128 ATP6V1G3Q96LB4 118 aa14.23□□□□□ -0.13
SMPD4-219ENST00000491128 FAM129AQ9BZQ8 928 aa14.23□□□□□ -0.13
SMPD4-219ENST00000491128 NKX2-4Q9H2Z4 354 aa14.23□□□□□ -0.13
SMPD4-219ENST00000491128 ASAH2Q9NR71 780 aa14.23□□□□□ -0.13
SMPD4-219ENST00000491128 UXTQ9UBK9 157 aaPredicted RBP14.23□□□□□ -0.13
SMPD4-219ENST00000491128 ADAM21Q9UKJ8 722 aa14.23□□□□□ -0.13
SMPD4-219ENST00000491128 IRAK3Q9Y616 596 aa14.23□□□□□ -0.13
SMPD4-219ENST00000491128 DRGXA6NNA5 263 aa14.23□□□□□ -0.13
SMPD4-219ENST00000491128 NCAM2O15394 837 aa14.23□□□□□ -0.13
SMPD4-219ENST00000491128 RAMP2O60895 175 aa14.23□□□□□ -0.13
SMPD4-219ENST00000491128 CLASP2O75122 1294 aaKnown RBP14.23□□□□□ -0.13
SMPD4-219ENST00000491128 CREMQ03060 361 aa14.23□□□□□ -0.13
SMPD4-219ENST00000491128 TEAD2Q15562 447 aa14.23□□□□□ -0.13
SMPD4-219ENST00000491128 FSCBQ5H9T9 825 aa14.23□□□□□ -0.13
SMPD4-219ENST00000491128 GRASPQ7Z6J2 395 aaPredicted RBP14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms