RNA–Protein interactions for RNA: ENST00000488454.5

SKA1-204, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 3 BASIC

Gene SKA1, Length 669 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-204ENST00000488454 PON2Q15165 354 aa10.57□□□□□ -0.72
SKA1-204ENST00000488454 E2F5Q15329 346 aa10.57□□□□□ -0.72
SKA1-204ENST00000488454 TMCO3Q6UWJ1 677 aa10.57□□□□□ -0.72
SKA1-204ENST00000488454 ZNF783Q6ZMS7 281 aa10.57□□□□□ -0.72
SKA1-204ENST00000488454 ANKS1BQ7Z6G8 1248 aa10.57□□□□□ -0.72
SKA1-204ENST00000488454 C12orf40Q86WS4 652 aa10.57□□□□□ -0.72
SKA1-204ENST00000488454 VSIG1Q86XK7 387 aa10.57□□□□□ -0.72
SKA1-204ENST00000488454 ZNF354CQ86Y25 554 aa10.57□□□□□ -0.72
SKA1-204ENST00000488454 AHI1Q8N157 1196 aa10.57□□□□□ -0.72
SKA1-204ENST00000488454 LZTR1Q8N653 840 aa10.57□□□□□ -0.72
SKA1-204ENST00000488454 RTL3Q8N8U3 475 aaKnown RBP10.57□□□□□ -0.72
SKA1-204ENST00000488454 EXD1Q8NHP7 514 aa10.57□□□□□ -0.72
SKA1-204ENST00000488454 WFIKKN2Q8TEU8 576 aa10.57□□□□□ -0.72
SKA1-204ENST00000488454 UCMAQ8WVF2 138 aa10.57□□□□□ -0.72
SKA1-204ENST00000488454 KRT35Q92764 455 aa10.57□□□□□ -0.72
SKA1-204ENST00000488454 CHFRQ96EP1 664 aa10.57□□□□□ -0.72
SKA1-204ENST00000488454 CSPG4P5Q96PW8 444 aa10.57□□□□□ -0.72
SKA1-204ENST00000488454 ZNF670Q9BS34 389 aa10.57□□□□□ -0.72
SKA1-204ENST00000488454 MUC3BQ9H195 1237 aa10.57□□□□□ -0.72
SKA1-204ENST00000488454 PRDM16Q9HAZ2 1276 aa10.57□□□□□ -0.72
SKA1-204ENST00000488454 KCND1Q9NSA2 647 aa10.57□□□□□ -0.72
SKA1-204ENST00000488454 ABCB8Q9NUT2 735 aa10.57□□□□□ -0.72
SKA1-204ENST00000488454 TMEM248Q9NWD8 314 aa10.57□□□□□ -0.72
SKA1-204ENST00000488454 DNAI1Q9UI46 699 aa10.57□□□□□ -0.72
SKA1-204ENST00000488454 GGA2Q9UJY4 613 aa10.57□□□□□ -0.72
SKA1-204ENST00000488454 HPCAL4Q9UM19 191 aa10.57□□□□□ -0.72
SKA1-204ENST00000488454 NDRG2Q9UN36 371 aaKnown RBP10.57□□□□□ -0.72
SKA1-204ENST00000488454 TBC1D30Q9Y2I9 924 aa10.57□□□□□ -0.72
SKA1-204ENST00000488454 SLC27A6Q9Y2P4 619 aa10.57□□□□□ -0.72
SKA1-204ENST00000488454 JRKLQ9Y4A0 524 aa10.57□□□□□ -0.72
SKA1-204ENST00000488454 UNC80Q8N2C7 3258 aa10.57□□□□□ -0.72
SKA1-204ENST00000488454 CUL9Q8IWT3 2517 aa10.56□□□□□ -0.72
SKA1-204ENST00000488454 ILVBLA1L0T0 632 aa10.56□□□□□ -0.72
SKA1-204ENST00000488454 KRBA1A5PL33 1030 aa10.56□□□□□ -0.72
SKA1-204ENST00000488454 FAM170BA6NMN3 283 aa10.56□□□□□ -0.72
SKA1-204ENST00000488454 USP27XA6NNY8 438 aa10.56□□□□□ -0.72
SKA1-204ENST00000488454 ZNF487B1APH4 448 aa10.56□□□□□ -0.72
SKA1-204ENST00000488454 RAMP2O60895 175 aa10.56□□□□□ -0.72
SKA1-204ENST00000488454 ATP5BP06576 529 aaKnown RBP10.56□□□□□ -0.72
SKA1-204ENST00000488454 CD48P09326 243 aa10.56□□□□□ -0.72
SKA1-204ENST00000488454 PABPC1P11940 636 aaKnown RBP10.56□□□□□ -0.72
SKA1-204ENST00000488454 POLR2EP19388 210 aaKnown RBP10.56□□□□□ -0.72
SKA1-204ENST00000488454 CD72P21854 359 aa10.56□□□□□ -0.72
SKA1-204ENST00000488454 AMPD1P23109 780 aa10.56□□□□□ -0.72
SKA1-204ENST00000488454 HOXC13P31276 330 aa10.56□□□□□ -0.72
SKA1-204ENST00000488454 SERPINB6P35237 376 aa10.56□□□□□ -0.72
SKA1-204ENST00000488454 IRAK1P51617 712 aa10.56□□□□□ -0.72
SKA1-204ENST00000488454 YBEYP58557 167 aaPredicted RBP10.56□□□□□ -0.72
SKA1-204ENST00000488454 GNG11P61952 73 aa10.56□□□□□ -0.72
SKA1-204ENST00000488454 TFDP2Q14188 446 aa10.56□□□□□ -0.72
SKA1-204ENST00000488454 LRRC32Q14392 662 aa10.56□□□□□ -0.72
SKA1-204ENST00000488454 DMC1Q14565 340 aa10.56□□□□□ -0.72
SKA1-204ENST00000488454 UBXN2BQ14CS0 331 aa10.56□□□□□ -0.72
SKA1-204ENST00000488454 GAB4Q2WGN9 574 aa10.56□□□□□ -0.72
SKA1-204ENST00000488454 FBXO43Q4G163 708 aa10.56□□□□□ -0.72
SKA1-204ENST00000488454 ANKRD20A8PQ5CZ79 823 aa10.56□□□□□ -0.72
SKA1-204ENST00000488454 FSCBQ5H9T9 825 aa10.56□□□□□ -0.72
SKA1-204ENST00000488454 TMEM196Q5HYL7 178 aa10.56□□□□□ -0.72
SKA1-204ENST00000488454 MEI1Q5TIA1 1274 aa10.56□□□□□ -0.72
SKA1-204ENST00000488454 RNF219Q5W0B1 726 aaPredicted RBP10.56□□□□□ -0.72
SKA1-204ENST00000488454 KAZNQ674X7 775 aa10.56□□□□□ -0.72
SKA1-204ENST00000488454 IL31Q6EBC2 164 aa10.56□□□□□ -0.72
SKA1-204ENST00000488454 TXNDC11Q6PKC3 985 aa10.56□□□□□ -0.72
SKA1-204ENST00000488454 NLRP14Q86W24 1093 aa10.56□□□□□ -0.72
SKA1-204ENST00000488454 RFX6Q8HWS3 928 aa10.56□□□□□ -0.72
SKA1-204ENST00000488454 FAM71BQ8TC56 605 aa10.56□□□□□ -0.72
SKA1-204ENST00000488454 HES6Q96HZ4 224 aa10.56□□□□□ -0.72
SKA1-204ENST00000488454 RNF157Q96PX1 679 aa10.56□□□□□ -0.72
SKA1-204ENST00000488454 SPON2Q9BUD6 331 aa10.56□□□□□ -0.72
SKA1-204ENST00000488454 CIPCQ9C0C6 399 aa10.56□□□□□ -0.72
SKA1-204ENST00000488454 MAGEH1Q9H213 219 aa10.56□□□□□ -0.72
SKA1-204ENST00000488454 TOR4AQ9NXH8 423 aa10.56□□□□□ -0.72
SKA1-204ENST00000488454 VPS28Q9UK41 221 aa10.56□□□□□ -0.72
SKA1-204ENST00000488454 CLEC4EQ9ULY5 219 aa10.56□□□□□ -0.72
SKA1-204ENST00000488454 PACSIN2Q9UNF0 486 aaPredicted RBP10.56□□□□□ -0.72
SKA1-204ENST00000488454 PLA2G4CQ9UP65 541 aa10.56□□□□□ -0.72
SKA1-204ENST00000488454 ZKSCAN5Q9Y2L8 839 aa10.56□□□□□ -0.72
SKA1-204ENST00000488454 HELZP42694 1942 aaKnown RBP10.56□□□□□ -0.72
SKA1-204ENST00000488454 MYO10Q9HD67 2058 aa10.56□□□□□ -0.72
SKA1-204ENST00000488454 A0A0A0MRY4 1105 aa10.55□□□□□ -0.72
SKA1-204ENST00000488454 LCE2BO14633 110 aa10.55□□□□□ -0.72
SKA1-204ENST00000488454 KCNK3O14649 394 aa10.55□□□□□ -0.72
SKA1-204ENST00000488454 APOL1O14791 398 aa10.55□□□□□ -0.72
SKA1-204ENST00000488454 TRIM24O15164 1050 aa10.55□□□□□ -0.72
SKA1-204ENST00000488454 IL4RP24394 825 aa10.55□□□□□ -0.72
SKA1-204ENST00000488454 HLA-FP30511 346 aa10.55□□□□□ -0.72
SKA1-204ENST00000488454 CD70P32970 193 aa10.55□□□□□ -0.72
SKA1-204ENST00000488454 CSKP41240 450 aa10.55□□□□□ -0.72
SKA1-204ENST00000488454 MARCKSL1P49006 195 aa10.55□□□□□ -0.72
SKA1-204ENST00000488454 PEX5P50542 639 aa10.55□□□□□ -0.72
SKA1-204ENST00000488454 NDST2P52849 883 aa10.55□□□□□ -0.72
SKA1-204ENST00000488454 GNA12Q03113 381 aa10.55□□□□□ -0.72
SKA1-204ENST00000488454 SULT2A1Q06520 285 aa10.55□□□□□ -0.72
SKA1-204ENST00000488454 LMAN2Q12907 356 aa10.55□□□□□ -0.72
SKA1-204ENST00000488454 DPYSQ14117 519 aa10.55□□□□□ -0.72
SKA1-204ENST00000488454 EIF4HQ15056 248 aaKnown RBP10.55□□□□□ -0.72
SKA1-204ENST00000488454 GEN1Q17RS7 908 aa10.55□□□□□ -0.72
SKA1-204ENST00000488454 PARP15Q460N3 678 aa10.55□□□□□ -0.72
SKA1-204ENST00000488454 TFDP3Q5H9I0 405 aa10.55□□□□□ -0.72
SKA1-204ENST00000488454 DGKKQ5KSL6 1271 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms