RNA–Protein interactions for RNA: ENST00000487147.5

COL6A4P1-202, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

BASIC

Gene COL6A4P1, Length 4,317 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-202ENST00000487147 DHRS4L1P0CG22 281 aa7.8□□□□□ -1.16
COL6A4P1-202ENST00000487147 CCNA2P20248 432 aa7.8□□□□□ -1.16
COL6A4P1-202ENST00000487147 KCNK10P57789 538 aa7.8□□□□□ -1.16
COL6A4P1-202ENST00000487147 CSHL1Q14406 222 aa7.8□□□□□ -1.16
COL6A4P1-202ENST00000487147 SH3D19Q5HYK7 790 aa7.8□□□□□ -1.16
COL6A4P1-202ENST00000487147 AGAP9Q5VTM2 703 aa7.8□□□□□ -1.16
COL6A4P1-202ENST00000487147 POTEHQ6S545 545 aa7.8□□□□□ -1.16
COL6A4P1-202ENST00000487147 ABRAXAS1Q6UWZ7 409 aa7.8□□□□□ -1.16
COL6A4P1-202ENST00000487147 FASTKD5Q7L8L6 764 aaKnown RBP7.8□□□□□ -1.16
COL6A4P1-202ENST00000487147 ZNF410Q86VK4 478 aa7.8□□□□□ -1.16
COL6A4P1-202ENST00000487147 PLD3Q8IV08 490 aa7.8□□□□□ -1.16
COL6A4P1-202ENST00000487147 NIPA2Q8N8Q9 360 aa7.8□□□□□ -1.16
COL6A4P1-202ENST00000487147 OR52K1Q8NGK4 314 aa7.8□□□□□ -1.16
COL6A4P1-202ENST00000487147 TUBGCP3Q96CW5 907 aa7.8□□□□□ -1.16
COL6A4P1-202ENST00000487147 HAPLN3Q96S86 360 aa7.8□□□□□ -1.16
COL6A4P1-202ENST00000487147 SEPHS2Q99611 448 aa7.8□□□□□ -1.16
COL6A4P1-202ENST00000487147 CXorf21Q9HAI6 301 aa7.8□□□□□ -1.16
COL6A4P1-202ENST00000487147 POPDC2Q9HBU9 364 aa7.8□□□□□ -1.16
COL6A4P1-202ENST00000487147 PCDH18Q9HCL0 1135 aa7.8□□□□□ -1.16
COL6A4P1-202ENST00000487147 UBP1Q9NZI7 540 aa7.8□□□□□ -1.16
COL6A4P1-202ENST00000487147 ARHGAP28Q9P2N2 729 aa7.8□□□□□ -1.16
COL6A4P1-202ENST00000487147 ADAM28Q9UKQ2 775 aa7.8□□□□□ -1.16
COL6A4P1-202ENST00000487147 COQ6Q9Y2Z9 468 aa7.8□□□□□ -1.16
COL6A4P1-202ENST00000487147 SPDYE16A6NNV3 312 aaPredicted RBP7.8□□□□□ -1.16
COL6A4P1-202ENST00000487147 ZBTB11O95625 1053 aaPredicted RBP7.8□□□□□ -1.16
COL6A4P1-202ENST00000487147 CYP2C8P10632 490 aa7.8□□□□□ -1.16
COL6A4P1-202ENST00000487147 TFEBP19484 476 aa7.8□□□□□ -1.16
COL6A4P1-202ENST00000487147 TPSB2P20231 275 aa7.8□□□□□ -1.16
COL6A4P1-202ENST00000487147 RXRBP28702 533 aa7.8□□□□□ -1.16
COL6A4P1-202ENST00000487147 TPSAB1Q15661 275 aa7.8□□□□□ -1.16
COL6A4P1-202ENST00000487147 CYP51A1Q16850 503 aa7.8□□□□□ -1.16
COL6A4P1-202ENST00000487147 LSM12Q3MHD2 195 aaKnown RBP7.8□□□□□ -1.16
COL6A4P1-202ENST00000487147 SLC9B1Q4ZJI4 515 aa7.8□□□□□ -1.16
COL6A4P1-202ENST00000487147 PERM1Q5SV97 790 aa7.8□□□□□ -1.16
COL6A4P1-202ENST00000487147 FOXB2Q5VYV0 432 aa7.8□□□□□ -1.16
COL6A4P1-202ENST00000487147 LIPMQ5VYY2 423 aa7.8□□□□□ -1.16
COL6A4P1-202ENST00000487147 EGFLAMQ63HQ2 1017 aa7.8□□□□□ -1.16
COL6A4P1-202ENST00000487147 XYLT1Q86Y38 959 aa7.8□□□□□ -1.16
COL6A4P1-202ENST00000487147 MAGEE2Q8TD90 523 aaPredicted RBP7.8□□□□□ -1.16
COL6A4P1-202ENST00000487147 CRYGNQ8WXF5 182 aa7.8□□□□□ -1.16
COL6A4P1-202ENST00000487147 LRTOMTQ8WZ04 291 aa7.8□□□□□ -1.16
COL6A4P1-202ENST00000487147 PHF21BQ96EK2 531 aa7.8□□□□□ -1.16
COL6A4P1-202ENST00000487147 TSPAN17Q96FV3 270 aa7.8□□□□□ -1.16
COL6A4P1-202ENST00000487147 CEP19Q96LK0 163 aa7.8□□□□□ -1.16
COL6A4P1-202ENST00000487147 APBA2Q99767 749 aa7.8□□□□□ -1.16
COL6A4P1-202ENST00000487147 ZNF670Q9BS34 389 aa7.8□□□□□ -1.16
COL6A4P1-202ENST00000487147 NTPCRQ9BSD7 190 aaKnown RBP7.8□□□□□ -1.16
COL6A4P1-202ENST00000487147 EIF2AQ9BY44 585 aaKnown RBP7.8□□□□□ -1.16
COL6A4P1-202ENST00000487147 NDEL1Q9GZM8 345 aa7.8□□□□□ -1.16
COL6A4P1-202ENST00000487147 SIK2Q9H0K1 926 aa7.8□□□□□ -1.16
COL6A4P1-202ENST00000487147 CAB39LQ9H9S4 337 aa7.8□□□□□ -1.16
COL6A4P1-202ENST00000487147 EURLQ9NYK6 297 aa7.8□□□□□ -1.16
COL6A4P1-202ENST00000487147 HACD3Q9P035 362 aa7.8□□□□□ -1.16
COL6A4P1-202ENST00000487147 MORF4L1Q9UBU8 362 aa7.8□□□□□ -1.16
COL6A4P1-202ENST00000487147 BARX2Q9UMQ3 279 aaPredicted RBP7.8□□□□□ -1.16
COL6A4P1-202ENST00000487147 SCAF8Q9UPN6 1271 aaKnown RBP7.8□□□□□ -1.16
COL6A4P1-202ENST00000487147 CLEC11AQ9Y240 323 aa7.8□□□□□ -1.16
COL6A4P1-202ENST00000487147 SF3B1O75533 1304 aaKnown RBP eCLIP7.8□□□□□ -1.16
COL6A4P1-202ENST00000487147 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.8□□□□□ -1.16
COL6A4P1-202ENST00000487147 BCLAF3A2AJT9 711 aaKnown RBP7.8□□□□□ -1.16
COL6A4P1-202ENST00000487147 TRIM43BA6NCK2 446 aa7.8□□□□□ -1.16
COL6A4P1-202ENST00000487147 DFFAO00273 331 aa7.8□□□□□ -1.16
COL6A4P1-202ENST00000487147 DNAJA2O60884 412 aa7.8□□□□□ -1.16
COL6A4P1-202ENST00000487147 HUS1O60921 280 aa7.8□□□□□ -1.16
COL6A4P1-202ENST00000487147 LDLRP01130 860 aa7.8□□□□□ -1.16
COL6A4P1-202ENST00000487147 ATXN8OSP0DMR3 200 aa7.8□□□□□ -1.16
COL6A4P1-202ENST00000487147 ACO1P21399 889 aaKnown RBP7.8□□□□□ -1.16
COL6A4P1-202ENST00000487147 JAK1P23458 1154 aa7.8□□□□□ -1.16
COL6A4P1-202ENST00000487147 ARHGDIAP52565 204 aa7.8□□□□□ -1.16
COL6A4P1-202ENST00000487147 GBE1Q04446 702 aa7.8□□□□□ -1.16
COL6A4P1-202ENST00000487147 RALGDSQ12967 914 aa7.8□□□□□ -1.16
COL6A4P1-202ENST00000487147 KCNJ11Q14654 390 aa7.8□□□□□ -1.16
COL6A4P1-202ENST00000487147 EML3Q32P44 896 aa7.8□□□□□ -1.16
COL6A4P1-202ENST00000487147 FAM91A1Q658Y4 838 aa7.8□□□□□ -1.16
COL6A4P1-202ENST00000487147 TAF2Q6P1X5 1199 aa7.8□□□□□ -1.16
COL6A4P1-202ENST00000487147 FAM183BPQ6ZVS7 135 aa7.8□□□□□ -1.16
COL6A4P1-202ENST00000487147 SLC4A11Q8NBS3 891 aa7.8□□□□□ -1.16
COL6A4P1-202ENST00000487147 LPGAT1Q92604 370 aa7.8□□□□□ -1.16
COL6A4P1-202ENST00000487147 LGMNQ99538 433 aa7.8□□□□□ -1.16
COL6A4P1-202ENST00000487147 PKP2Q99959 881 aa7.8□□□□□ -1.16
COL6A4P1-202ENST00000487147 ARPC5LQ9BPX5 153 aa7.8□□□□□ -1.16
COL6A4P1-202ENST00000487147 GATA5Q9BWX5 397 aaPredicted RBP7.8□□□□□ -1.16
COL6A4P1-202ENST00000487147 LHX5Q9H2C1 402 aa7.8□□□□□ -1.16
COL6A4P1-202ENST00000487147 HMG20AQ9NP66 347 aa7.8□□□□□ -1.16
COL6A4P1-202ENST00000487147 HACD1B0YJ81 288 aa7.79□□□□□ -1.16
COL6A4P1-202ENST00000487147 PDLIM1O00151 329 aa7.79□□□□□ -1.16
COL6A4P1-202ENST00000487147 PSMD3O43242 534 aa7.79□□□□□ -1.16
COL6A4P1-202ENST00000487147 SH3BP5O60239 455 aa7.79□□□□□ -1.16
COL6A4P1-202ENST00000487147 CABYRO75952 493 aa7.79□□□□□ -1.16
COL6A4P1-202ENST00000487147 IL1BP01584 269 aa7.79□□□□□ -1.16
COL6A4P1-202ENST00000487147 SNRPB2P08579 225 aaKnown RBP7.79□□□□□ -1.16
COL6A4P1-202ENST00000487147 NFKBIAP25963 317 aa7.79□□□□□ -1.16
COL6A4P1-202ENST00000487147 HOXA10P31260 410 aaPredicted RBP7.79□□□□□ -1.16
COL6A4P1-202ENST00000487147 ENTPD1P49961 510 aa7.79□□□□□ -1.16
COL6A4P1-202ENST00000487147 PLK1P53350 603 aa7.79□□□□□ -1.16
COL6A4P1-202ENST00000487147 NFYCQ13952 458 aa7.79□□□□□ -1.16
COL6A4P1-202ENST00000487147 MAPK11Q15759 364 aa7.79□□□□□ -1.16
COL6A4P1-202ENST00000487147 ARL13AQ5H913 290 aaPredicted RBP7.79□□□□□ -1.16
COL6A4P1-202ENST00000487147 SMYD1Q8NB12 490 aa7.79□□□□□ -1.16
COL6A4P1-202ENST00000487147 CMASQ8NFW8 434 aaPredicted RBP7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms