RNA–Protein interactions for RNA: ENST00000485465.1

CHMP3-207, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 920 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-207ENST00000485465 ACVRL1P37023 503 aa18■□□□□ 0.47
CHMP3-207ENST00000485465 ETFBP38117 255 aa18■□□□□ 0.47
CHMP3-207ENST00000485465 PAFAH1B1P43034 410 aa18■□□□□ 0.47
CHMP3-207ENST00000485465 PAPOLAP51003 745 aaKnown RBP18■□□□□ 0.47
CHMP3-207ENST00000485465 PLK1P53350 603 aa18■□□□□ 0.47
CHMP3-207ENST00000485465 OTUD4Q01804 1114 aaKnown RBP18■□□□□ 0.47
CHMP3-207ENST00000485465 GALNT2Q10471 571 aa18■□□□□ 0.47
CHMP3-207ENST00000485465 NOMO1Q15155 1222 aa18■□□□□ 0.47
CHMP3-207ENST00000485465 DNTTIP2Q5QJE6 756 aaKnown RBP18■□□□□ 0.47
CHMP3-207ENST00000485465 NAIF1Q69YI7 327 aaPredicted RBP18■□□□□ 0.47
CHMP3-207ENST00000485465 RALGPS2Q86X27 583 aaPredicted RBP18■□□□□ 0.47
CHMP3-207ENST00000485465 GJD3Q8N144 294 aa18■□□□□ 0.47
CHMP3-207ENST00000485465 CCDC33Q8N5R6 958 aa18■□□□□ 0.47
CHMP3-207ENST00000485465 ACTL9Q8TC94 416 aa18■□□□□ 0.47
CHMP3-207ENST00000485465 SPON2Q9BUD6 331 aa18■□□□□ 0.47
CHMP3-207ENST00000485465 PIAS3Q9Y6X2 628 aa18■□□□□ 0.47
CHMP3-207ENST00000485465 MYOFQ9NZM1 2061 aa17.99■□□□□ 0.47
CHMP3-207ENST00000485465 COL4A2P08572 1712 aa17.99■□□□□ 0.47
CHMP3-207ENST00000485465 UNC80Q8N2C7 3258 aa17.99■□□□□ 0.47
CHMP3-207ENST00000485465 PDE2AO00408 941 aaPredicted RBP17.99■□□□□ 0.47
CHMP3-207ENST00000485465 NCAM2O15394 837 aa17.99■□□□□ 0.47
CHMP3-207ENST00000485465 MX2P20592 715 aa17.99■□□□□ 0.47
CHMP3-207ENST00000485465 CTHP32929 405 aa17.99■□□□□ 0.47
CHMP3-207ENST00000485465 SERINC3Q13530 473 aa17.99■□□□□ 0.47
CHMP3-207ENST00000485465 DMC1Q14565 340 aa17.99■□□□□ 0.47
CHMP3-207ENST00000485465 PDK1Q15118 436 aa17.99■□□□□ 0.47
CHMP3-207ENST00000485465 PLEKHG6Q3KR16 790 aa17.99■□□□□ 0.47
CHMP3-207ENST00000485465 PREPLQ4J6C6 727 aaPredicted RBP17.99■□□□□ 0.47
CHMP3-207ENST00000485465 SLC44A4Q53GD3 710 aa17.99■□□□□ 0.47
CHMP3-207ENST00000485465 PITRM1Q5JRX3 1037 aa17.99■□□□□ 0.47
CHMP3-207ENST00000485465 TJAP1Q5JTD0 557 aa17.99■□□□□ 0.47
CHMP3-207ENST00000485465 IER5LQ5T953 404 aa17.99■□□□□ 0.47
CHMP3-207ENST00000485465 IL31Q6EBC2 164 aa17.99■□□□□ 0.47
CHMP3-207ENST00000485465 LRRC49Q8IUZ0 686 aa17.99■□□□□ 0.47
CHMP3-207ENST00000485465 APCDD1Q8J025 514 aa17.99■□□□□ 0.47
CHMP3-207ENST00000485465 PHTF2Q8N3S3 785 aa17.99■□□□□ 0.47
CHMP3-207ENST00000485465 WFIKKN2Q8TEU8 576 aa17.99■□□□□ 0.47
CHMP3-207ENST00000485465 OLFM3Q96PB7 478 aa17.99■□□□□ 0.47
CHMP3-207ENST00000485465 PNKPQ96T60 521 aa17.99■□□□□ 0.47
CHMP3-207ENST00000485465 FAM118BQ9BPY3 351 aa17.99■□□□□ 0.47
CHMP3-207ENST00000485465 ACE2Q9BYF1 805 aaPredicted RBP17.99■□□□□ 0.47
CHMP3-207ENST00000485465 FRMD8P1Q9BZ68 369 aaPredicted RBP17.99■□□□□ 0.47
CHMP3-207ENST00000485465 VPS28Q9UK41 221 aa17.99■□□□□ 0.47
CHMP3-207ENST00000485465 INTS6Q9UL03 887 aaKnown RBP17.99■□□□□ 0.47
CHMP3-207ENST00000485465 TICRRQ7Z2Z1 1910 aa17.98■□□□□ 0.47
CHMP3-207ENST00000485465 KRIT1O00522 736 aa17.98■□□□□ 0.47
CHMP3-207ENST00000485465 KDELR3O43731 214 aa17.98■□□□□ 0.47
CHMP3-207ENST00000485465 GARSP41250 739 aaKnown RBP17.98■□□□□ 0.47
CHMP3-207ENST00000485465 GALK1P51570 392 aa17.98■□□□□ 0.47
CHMP3-207ENST00000485465 EIF3EP60228 445 aaKnown RBP17.98■□□□□ 0.47
CHMP3-207ENST00000485465 KDSRQ06136 332 aa17.98■□□□□ 0.47
CHMP3-207ENST00000485465 MESP2Q0VG99 397 aa17.98■□□□□ 0.47
CHMP3-207ENST00000485465 XRCC4Q13426 336 aa17.98■□□□□ 0.47
CHMP3-207ENST00000485465 GEN1Q17RS7 908 aa17.98■□□□□ 0.47
CHMP3-207ENST00000485465 WHAMMP3Q1A5X7 153 aa17.98■□□□□ 0.47
CHMP3-207ENST00000485465 FUT11Q495W5 492 aa17.98■□□□□ 0.47
CHMP3-207ENST00000485465 ARHGAP36Q6ZRI8 547 aa17.98■□□□□ 0.47
CHMP3-207ENST00000485465 ZNF354CQ86Y25 554 aa17.98■□□□□ 0.47
CHMP3-207ENST00000485465 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.98■□□□□ 0.47
CHMP3-207ENST00000485465 AHI1Q8N157 1196 aa17.98■□□□□ 0.47
CHMP3-207ENST00000485465 ATPAF2Q8N5M1 289 aa17.98■□□□□ 0.47
CHMP3-207ENST00000485465 PRELID2Q8N945 189 aa17.98■□□□□ 0.47
CHMP3-207ENST00000485465 C1orf54Q8WWF1 131 aa17.98■□□□□ 0.47
CHMP3-207ENST00000485465 MSANTD3Q96H12 275 aa17.98■□□□□ 0.47
CHMP3-207ENST00000485465 P2RY13Q9BPV8 354 aa17.98■□□□□ 0.47
CHMP3-207ENST00000485465 AP1M1Q9BXS5 423 aa17.98■□□□□ 0.47
CHMP3-207ENST00000485465 BRD8Q9H0E9 1235 aa17.98■□□□□ 0.47
CHMP3-207ENST00000485465 ATP13A1Q9HD20 1204 aa17.98■□□□□ 0.47
CHMP3-207ENST00000485465 CD320Q9NPF0 282 aa17.98■□□□□ 0.47
CHMP3-207ENST00000485465 MRFAP1Q9Y605 127 aa17.98■□□□□ 0.47
CHMP3-207ENST00000485465 PPP1R12AO14974 1030 aaPredicted RBP17.97■□□□□ 0.47
CHMP3-207ENST00000485465 NUMBP49757 651 aa17.97■□□□□ 0.47
CHMP3-207ENST00000485465 CCNG2Q16589 344 aa17.97■□□□□ 0.47
CHMP3-207ENST00000485465 TXNDC11Q6PKC3 985 aa17.97■□□□□ 0.47
CHMP3-207ENST00000485465 ADIPOR2Q86V24 386 aa17.97■□□□□ 0.47
CHMP3-207ENST00000485465 ZC3H18Q86VM9 953 aaKnown RBP17.97■□□□□ 0.47
CHMP3-207ENST00000485465 SUGP1Q8IWZ8 645 aaKnown RBP17.97■□□□□ 0.47
CHMP3-207ENST00000485465 UBALD2Q8IYN6 164 aa17.97■□□□□ 0.47
CHMP3-207ENST00000485465 TERB1Q8NA31 727 aa17.97■□□□□ 0.47
CHMP3-207ENST00000485465 DCAF4L2Q8NA75 395 aa17.97■□□□□ 0.47
CHMP3-207ENST00000485465 CCNYQ8ND76 341 aa17.97■□□□□ 0.47
CHMP3-207ENST00000485465 SLC35B2Q8TB61 432 aa17.97■□□□□ 0.47
CHMP3-207ENST00000485465 ATG4AQ8WYN0 398 aa17.97■□□□□ 0.47
CHMP3-207ENST00000485465 EXOC4Q96A65 974 aa17.97■□□□□ 0.47
CHMP3-207ENST00000485465 HDAC11Q96DB2 347 aa17.97■□□□□ 0.47
CHMP3-207ENST00000485465 TSGA13Q96PP4 275 aa17.97■□□□□ 0.47
CHMP3-207ENST00000485465 LGMNQ99538 433 aa17.97■□□□□ 0.47
CHMP3-207ENST00000485465 C2orf49Q9BVC5 232 aaPredicted RBP17.97■□□□□ 0.47
CHMP3-207ENST00000485465 FBRSL1Q9HCM7 1045 aaKnown RBP17.97■□□□□ 0.47
CHMP3-207ENST00000485465 HOMER3Q9NSC5 361 aa17.97■□□□□ 0.47
CHMP3-207ENST00000485465 IPO11Q9UI26 975 aaKnown RBP17.97■□□□□ 0.47
CHMP3-207ENST00000485465 HPCAL4Q9UM19 191 aa17.97■□□□□ 0.47
CHMP3-207ENST00000485465 MYO10Q9HD67 2058 aa17.96■□□□□ 0.47
CHMP3-207ENST00000485465 A0A0A0MRY4 1105 aa17.96■□□□□ 0.47
CHMP3-207ENST00000485465 GOLGA6L10A0A0M3HER8 536 aa17.96■□□□□ 0.47
CHMP3-207ENST00000485465 HACD1B0YJ81 288 aa17.96■□□□□ 0.47
CHMP3-207ENST00000485465 H7C0C1 242 aa17.96■□□□□ 0.47
CHMP3-207ENST00000485465 CBX4O00257 560 aa17.96■□□□□ 0.47
CHMP3-207ENST00000485465 MCF2LO15068 1137 aa17.96■□□□□ 0.47
CHMP3-207ENST00000485465 LIASO43766 372 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms