RNA–Protein interactions for RNA: ENST00000485093.1

TM9SF3-205, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 5

Gene TM9SF3, Length 407 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-205ENST00000485093 SLU7O95391 586 aaKnown RBP4.59□□□□□ -1.67
TM9SF3-205ENST00000485093 GCNT3O95395 438 aa4.59□□□□□ -1.67
TM9SF3-205ENST00000485093 AHSGP02765 367 aa4.59□□□□□ -1.67
TM9SF3-205ENST00000485093 CCDC175P0C221 793 aa4.59□□□□□ -1.67
TM9SF3-205ENST00000485093 GAP43P17677 238 aa4.59□□□□□ -1.67
TM9SF3-205ENST00000485093 TRIM21P19474 475 aaKnown RBP4.59□□□□□ -1.67
TM9SF3-205ENST00000485093 CCND2P30279 289 aa4.59□□□□□ -1.67
TM9SF3-205ENST00000485093 NMT1P30419 496 aaKnown RBP4.59□□□□□ -1.67
TM9SF3-205ENST00000485093 CASP5P51878 434 aa4.59□□□□□ -1.67
TM9SF3-205ENST00000485093 RPS6P62753 249 aaKnown RBP4.59□□□□□ -1.67
TM9SF3-205ENST00000485093 ZBED6P86452 979 aa4.59□□□□□ -1.67
TM9SF3-205ENST00000485093 SETQ01105 290 aaPredicted RBP4.59□□□□□ -1.67
TM9SF3-205ENST00000485093 FGL2Q14314 439 aa4.59□□□□□ -1.67
TM9SF3-205ENST00000485093 HLTFQ14527 1009 aaKnown RBP eCLIP4.59□□□□□ -1.67
TM9SF3-205ENST00000485093 PGM5Q15124 567 aa4.59□□□□□ -1.67
TM9SF3-205ENST00000485093 KNOP1Q1ED39 458 aaKnown RBP4.59□□□□□ -1.67
TM9SF3-205ENST00000485093 FER1L6Q2WGJ9 1857 aa4.59□□□□□ -1.67
TM9SF3-205ENST00000485093 LSM12Q3MHD2 195 aaKnown RBP4.59□□□□□ -1.67
TM9SF3-205ENST00000485093 SP5Q6BEB4 398 aaPredicted RBP4.59□□□□□ -1.67
TM9SF3-205ENST00000485093 SNRNP48Q6IEG0 339 aaKnown RBP4.59□□□□□ -1.67
TM9SF3-205ENST00000485093 CATSPERGQ6ZRH7 1159 aa4.59□□□□□ -1.67
TM9SF3-205ENST00000485093 C1orf186Q6ZWK4 172 aa4.59□□□□□ -1.67
TM9SF3-205ENST00000485093 GPC2Q8N158 579 aa4.59□□□□□ -1.67
TM9SF3-205ENST00000485093 SAMD3Q8N6K7 520 aa4.59□□□□□ -1.67
TM9SF3-205ENST00000485093 PDPRQ8NCN5 879 aa4.59□□□□□ -1.67
TM9SF3-205ENST00000485093 ZNF397Q8NF99 534 aaPredicted RBP4.59□□□□□ -1.67
TM9SF3-205ENST00000485093 NEK11Q8NG66 645 aa4.59□□□□□ -1.67
TM9SF3-205ENST00000485093 TBC1D15Q8TC07 691 aa4.59□□□□□ -1.67
TM9SF3-205ENST00000485093 SMCR8Q8TEV9 937 aaPredicted RBP4.59□□□□□ -1.67
TM9SF3-205ENST00000485093 ERGIC2Q96RQ1 377 aa4.59□□□□□ -1.67
TM9SF3-205ENST00000485093 RMDN3Q96TC7 470 aa4.59□□□□□ -1.67
TM9SF3-205ENST00000485093 RIT2Q99578 217 aa4.59□□□□□ -1.67
TM9SF3-205ENST00000485093 B3GNT5Q9BYG0 378 aa4.59□□□□□ -1.67
TM9SF3-205ENST00000485093 TRIM54Q9BYV2 358 aa4.59□□□□□ -1.67
TM9SF3-205ENST00000485093 RNPEPQ9H4A4 650 aa4.59□□□□□ -1.67
TM9SF3-205ENST00000485093 BRD9Q9H8M2 597 aa4.59□□□□□ -1.67
TM9SF3-205ENST00000485093 MRPL44Q9H9J2 332 aaKnown RBP4.59□□□□□ -1.67
TM9SF3-205ENST00000485093 ZMAT3Q9HA38 289 aaKnown RBP4.59□□□□□ -1.67
TM9SF3-205ENST00000485093 SMURF2Q9HAU4 748 aa4.59□□□□□ -1.67
TM9SF3-205ENST00000485093 AGO4Q9HCK5 861 aaKnown RBP4.59□□□□□ -1.67
TM9SF3-205ENST00000485093 KIF13BQ9NQT8 1826 aa4.59□□□□□ -1.67
TM9SF3-205ENST00000485093 SLC2A4RGQ9NR83 387 aa4.59□□□□□ -1.67
TM9SF3-205ENST00000485093 RNF146Q9NTX7 359 aa4.59□□□□□ -1.67
TM9SF3-205ENST00000485093 MRPS18AQ9NVS2 196 aaKnown RBP4.59□□□□□ -1.67
TM9SF3-205ENST00000485093 HOXC10Q9NYD6 342 aa4.59□□□□□ -1.67
TM9SF3-205ENST00000485093 CFAP97Q9P2B7 532 aa4.59□□□□□ -1.67
TM9SF3-205ENST00000485093 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.59□□□□□ -1.67
TM9SF3-205ENST00000485093 AFG3L2Q9Y4W6 797 aa4.59□□□□□ -1.67
TM9SF3-205ENST00000485093 V9GYY5 206 aaPredicted RBP4.59□□□□□ -1.67
TM9SF3-205ENST00000485093 ARFGEF1Q9Y6D6 1849 aa4.58□□□□□ -1.68
TM9SF3-205ENST00000485093 FRMD3A2A2Y4 597 aa4.58□□□□□ -1.68
TM9SF3-205ENST00000485093 PIPSLA2A3N6 862 aa4.58□□□□□ -1.68
TM9SF3-205ENST00000485093 H3BUI4 141 aa4.58□□□□□ -1.68
TM9SF3-205ENST00000485093 TPP1O14773 563 aa4.58□□□□□ -1.68
TM9SF3-205ENST00000485093 ATP9AO75110 1047 aa4.58□□□□□ -1.68
TM9SF3-205ENST00000485093 ERN1O75460 977 aaKnown RBP4.58□□□□□ -1.68
TM9SF3-205ENST00000485093 GNA14O95837 355 aa4.58□□□□□ -1.68
TM9SF3-205ENST00000485093 CHEK2O96017 543 aa4.58□□□□□ -1.68
TM9SF3-205ENST00000485093 RARBP10826 455 aa4.58□□□□□ -1.68
TM9SF3-205ENST00000485093 RHCEP18577 417 aa4.58□□□□□ -1.68
TM9SF3-205ENST00000485093 MUTP22033 750 aa4.58□□□□□ -1.68
TM9SF3-205ENST00000485093 HOXD13P35453 343 aa4.58□□□□□ -1.68
TM9SF3-205ENST00000485093 CYLC1P35663 651 aaPredicted RBP4.58□□□□□ -1.68
TM9SF3-205ENST00000485093 CXADRP78310 365 aa4.58□□□□□ -1.68
TM9SF3-205ENST00000485093 RHDQ02161 417 aa4.58□□□□□ -1.68
TM9SF3-205ENST00000485093 ITGB3BPQ13352 177 aaPredicted RBP4.58□□□□□ -1.68
TM9SF3-205ENST00000485093 SEMA5AQ13591 1074 aa4.58□□□□□ -1.68
TM9SF3-205ENST00000485093 BOP1Q14137 746 aaKnown RBP4.58□□□□□ -1.68
TM9SF3-205ENST00000485093 ARHGAP29Q52LW3 1261 aa4.58□□□□□ -1.68
TM9SF3-205ENST00000485093 ZC2HC1CQ53FD0 456 aaPredicted RBP4.58□□□□□ -1.68
TM9SF3-205ENST00000485093 CRB2Q5IJ48 1285 aa4.58□□□□□ -1.68
TM9SF3-205ENST00000485093 ZNF569Q5MCW4 686 aa4.58□□□□□ -1.68
TM9SF3-205ENST00000485093 WDR59Q6PJI9 974 aa4.58□□□□□ -1.68
TM9SF3-205ENST00000485093 RRAGAQ7L523 313 aa4.58□□□□□ -1.68
TM9SF3-205ENST00000485093 NIPA1Q7RTP0 329 aa4.58□□□□□ -1.68
TM9SF3-205ENST00000485093 CACNA2D4Q7Z3S7 1137 aa4.58□□□□□ -1.68
TM9SF3-205ENST00000485093 KIAA1328Q86T90 577 aa4.58□□□□□ -1.68
TM9SF3-205ENST00000485093 SYCP3Q8IZU3 236 aa4.58□□□□□ -1.68
TM9SF3-205ENST00000485093 CELF5Q8N6W0 485 aaKnown RBP4.58□□□□□ -1.68
TM9SF3-205ENST00000485093 KBTBD7Q8WVZ9 684 aa4.58□□□□□ -1.68
TM9SF3-205ENST00000485093 CCDC43Q96MW1 224 aaKnown RBP4.58□□□□□ -1.68
TM9SF3-205ENST00000485093 WDR24Q96S15 920 aa4.58□□□□□ -1.68
TM9SF3-205ENST00000485093 ZSWIM1Q9BR11 485 aa4.58□□□□□ -1.68
TM9SF3-205ENST00000485093 SH2D3AQ9BRG2 576 aa4.58□□□□□ -1.68
TM9SF3-205ENST00000485093 LXNQ9BS40 222 aa4.58□□□□□ -1.68
TM9SF3-205ENST00000485093 CRACR2AQ9BSW2 395 aa4.58□□□□□ -1.68
TM9SF3-205ENST00000485093 MLST8Q9BVC4 326 aa4.58□□□□□ -1.68
TM9SF3-205ENST00000485093 PACSIN1Q9BY11 444 aa4.58□□□□□ -1.68
TM9SF3-205ENST00000485093 VPS11Q9H270 941 aa4.58□□□□□ -1.68
TM9SF3-205ENST00000485093 IKZF4Q9H2S9 585 aa4.58□□□□□ -1.68
TM9SF3-205ENST00000485093 NHEJ1Q9H9Q4 299 aaPredicted RBP4.58□□□□□ -1.68
TM9SF3-205ENST00000485093 RSAD1Q9HA92 442 aa4.58□□□□□ -1.68
TM9SF3-205ENST00000485093 NLRC4Q9NPP4 1024 aa4.58□□□□□ -1.68
TM9SF3-205ENST00000485093 PXMP2Q9NR77 195 aa4.58□□□□□ -1.68
TM9SF3-205ENST00000485093 ADARB2Q9NS39 739 aaKnown RBP4.58□□□□□ -1.68
TM9SF3-205ENST00000485093 FAM207AQ9NSI2 230 aaPredicted RBP4.58□□□□□ -1.68
TM9SF3-205ENST00000485093 TBC1D22BQ9NU19 505 aa4.58□□□□□ -1.68
TM9SF3-205ENST00000485093 MAP3K20Q9NYL2 800 aaKnown RBP4.58□□□□□ -1.68
TM9SF3-205ENST00000485093 WRAP73Q9P2S5 460 aaPredicted RBP4.58□□□□□ -1.68
TM9SF3-205ENST00000485093 PNMA2Q9UL42 364 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms