RNA–Protein interactions for RNA: ENST00000483544.1

LINC00477-201, long intergenic non-protein coding RNA 477, humanhuman

TSL 2 BASIC

Gene LINC00477, Length 1,710 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00477-201ENST00000483544 XKR4Q5GH76 650 aa12.75□□□□□ -0.37
LINC00477-201ENST00000483544 MARCH8Q5T0T0 291 aa12.75□□□□□ -0.37
LINC00477-201ENST00000483544 C9orf57Q5W0N0 161 aa12.75□□□□□ -0.37
LINC00477-201ENST00000483544 HEATR6Q6AI08 1181 aaKnown RBP12.75□□□□□ -0.37
LINC00477-201ENST00000483544 KYAT3Q6YP21 454 aaKnown RBP12.75□□□□□ -0.37
LINC00477-201ENST00000483544 CATSPER4Q7RTX7 472 aa12.75□□□□□ -0.37
LINC00477-201ENST00000483544 MTDHQ86UE4 582 aaKnown RBP12.75□□□□□ -0.37
LINC00477-201ENST00000483544 CTAGE3PQ8IX95 158 aa12.75□□□□□ -0.37
LINC00477-201ENST00000483544 C12orf29Q8N999 325 aa12.75□□□□□ -0.37
LINC00477-201ENST00000483544 OR6B3Q8NGW1 331 aa12.75□□□□□ -0.37
LINC00477-201ENST00000483544 TTC17Q96AE7 1141 aa12.75□□□□□ -0.37
LINC00477-201ENST00000483544 SIGLEC10Q96LC7 697 aa12.75□□□□□ -0.37
LINC00477-201ENST00000483544 C8orf48Q96LL4 319 aa12.75□□□□□ -0.37
LINC00477-201ENST00000483544 FAM111AQ96PZ2 611 aa12.75□□□□□ -0.37
LINC00477-201ENST00000483544 BTBD10Q9BSF8 475 aa12.75□□□□□ -0.37
LINC00477-201ENST00000483544 SNX25Q9H3E2 840 aa12.75□□□□□ -0.37
LINC00477-201ENST00000483544 ABHD16BQ9H3Z7 469 aa12.75□□□□□ -0.37
LINC00477-201ENST00000483544 STN1Q9H668 368 aaKnown RBP12.75□□□□□ -0.37
LINC00477-201ENST00000483544 PLK2Q9NYY3 685 aa12.75□□□□□ -0.37
LINC00477-201ENST00000483544 SIRPGQ9P1W8 387 aa12.75□□□□□ -0.37
LINC00477-201ENST00000483544 STK39Q9UEW8 545 aa12.75□□□□□ -0.37
LINC00477-201ENST00000483544 SORCS3Q9UPU3 1222 aa12.75□□□□□ -0.37
LINC00477-201ENST00000483544 NOSIPQ9Y314 301 aaKnown RBP12.75□□□□□ -0.37
LINC00477-201ENST00000483544 NRCAMQ92823 1304 aa12.75□□□□□ -0.37
LINC00477-201ENST00000483544 SCN4AP35499 1836 aa12.74□□□□□ -0.37
LINC00477-201ENST00000483544 A0A0A0MRY4 1105 aa12.74□□□□□ -0.37
LINC00477-201ENST00000483544 NOTOA8MTQ0 251 aa12.74□□□□□ -0.37
LINC00477-201ENST00000483544 A8MXQ7 604 aa12.74□□□□□ -0.37
LINC00477-201ENST00000483544 H3BRJ5 948 aa12.74□□□□□ -0.37
LINC00477-201ENST00000483544 PIRO00625 290 aa12.74□□□□□ -0.37
LINC00477-201ENST00000483544 XPO1O14980 1071 aaKnown RBP12.74□□□□□ -0.37
LINC00477-201ENST00000483544 MAGEB3O15480 346 aa12.74□□□□□ -0.37
LINC00477-201ENST00000483544 ALDH1A2O94788 518 aa12.74□□□□□ -0.37
LINC00477-201ENST00000483544 DLDP09622 509 aaKnown RBP12.74□□□□□ -0.37
LINC00477-201ENST00000483544 HOXA11P31270 313 aaPredicted RBP12.74□□□□□ -0.37
LINC00477-201ENST00000483544 PPARGP37231 505 aaPredicted RBP12.74□□□□□ -0.37
LINC00477-201ENST00000483544 BCAP31P51572 246 aa12.74□□□□□ -0.37
LINC00477-201ENST00000483544 ZNF135P52742 658 aaPredicted RBP12.74□□□□□ -0.37
LINC00477-201ENST00000483544 RPS3AP61247 264 aaKnown RBP12.74□□□□□ -0.37
LINC00477-201ENST00000483544 ZBTB16Q05516 673 aa12.74□□□□□ -0.37
LINC00477-201ENST00000483544 FBXO47Q5MNV8 452 aa12.74□□□□□ -0.37
LINC00477-201ENST00000483544 TMEM214Q6NUQ4 689 aaKnown RBP12.74□□□□□ -0.37
LINC00477-201ENST00000483544 UNC5AQ6ZN44 842 aa12.74□□□□□ -0.37
LINC00477-201ENST00000483544 NLGN2Q8NFZ4 835 aa12.74□□□□□ -0.37
LINC00477-201ENST00000483544 PTCD2Q8WV60 388 aaKnown RBP12.74□□□□□ -0.37
LINC00477-201ENST00000483544 TFB1MQ8WVM0 346 aaKnown RBP12.74□□□□□ -0.37
LINC00477-201ENST00000483544 CDKL2Q92772 493 aa12.74□□□□□ -0.37
LINC00477-201ENST00000483544 SGF29Q96ES7 293 aa12.74□□□□□ -0.37
LINC00477-201ENST00000483544 PTCD3Q96EY7 689 aaKnown RBP12.74□□□□□ -0.37
LINC00477-201ENST00000483544 PIWIL1Q96J94 861 aaKnown RBP12.74□□□□□ -0.37
LINC00477-201ENST00000483544 CEP295NLQ96MC4 621 aa12.74□□□□□ -0.37
LINC00477-201ENST00000483544 SPATA13Q96N96 652 aa12.74□□□□□ -0.37
LINC00477-201ENST00000483544 CSPG4P5Q96PW8 444 aa12.74□□□□□ -0.37
LINC00477-201ENST00000483544 CTRCQ99895 268 aa12.74□□□□□ -0.37
LINC00477-201ENST00000483544 WWP1Q9H0M0 922 aa12.74□□□□□ -0.37
LINC00477-201ENST00000483544 ZDHHC7Q9NXF8 308 aa12.74□□□□□ -0.37
LINC00477-201ENST00000483544 GIN1Q9NXP7 522 aa12.74□□□□□ -0.37
LINC00477-201ENST00000483544 HEY2Q9UBP5 337 aa12.74□□□□□ -0.37
LINC00477-201ENST00000483544 TRIM33Q9UPN9 1127 aa12.74□□□□□ -0.37
LINC00477-201ENST00000483544 DMTF1Q9Y222 760 aa12.74□□□□□ -0.37
LINC00477-201ENST00000483544 SQORQ9Y6N5 450 aa12.74□□□□□ -0.37
LINC00477-201ENST00000483544 FUOMA2VDF0 154 aa12.74□□□□□ -0.37
LINC00477-201ENST00000483544 ANKRD34BA5PLL1 514 aa12.74□□□□□ -0.37
LINC00477-201ENST00000483544 GOLGA8RI6L899 631 aa12.74□□□□□ -0.37
LINC00477-201ENST00000483544 DAB1O75553 588 aa12.74□□□□□ -0.37
LINC00477-201ENST00000483544 GRAP2O75791 330 aa12.74□□□□□ -0.37
LINC00477-201ENST00000483544 ZNF286BP0CG31 522 aa12.74□□□□□ -0.37
LINC00477-201ENST00000483544 PRKACBP22694 351 aa12.74□□□□□ -0.37
LINC00477-201ENST00000483544 WARSP23381 471 aaKnown RBP12.74□□□□□ -0.37
LINC00477-201ENST00000483544 GNL1P36915 607 aaPredicted RBP12.74□□□□□ -0.37
LINC00477-201ENST00000483544 MATKP42679 507 aa12.74□□□□□ -0.37
LINC00477-201ENST00000483544 THOP1P52888 689 aa12.74□□□□□ -0.37
LINC00477-201ENST00000483544 FRG1Q14331 258 aaKnown RBP12.74□□□□□ -0.37
LINC00477-201ENST00000483544 INSCQ1MX18 579 aa12.74□□□□□ -0.37
LINC00477-201ENST00000483544 SOWAHAQ2M3V2 549 aa12.74□□□□□ -0.37
LINC00477-201ENST00000483544 SLC25A52Q3SY17 297 aa12.74□□□□□ -0.37
LINC00477-201ENST00000483544 PDZD4Q76G19 769 aaPredicted RBP12.74□□□□□ -0.37
LINC00477-201ENST00000483544 SCUBE3Q8IX30 993 aa12.74□□□□□ -0.37
LINC00477-201ENST00000483544 DCLK2Q8N568 766 aa12.74□□□□□ -0.37
LINC00477-201ENST00000483544 TOP6BLQ8N6T0 577 aa12.74□□□□□ -0.37
LINC00477-201ENST00000483544 OR6J1Q8NGC5 347 aa12.74□□□□□ -0.37
LINC00477-201ENST00000483544 LILRB1Q8NHL6 650 aaPredicted RBP12.74□□□□□ -0.37
LINC00477-201ENST00000483544 RFWD2Q8NHY2 731 aa12.74□□□□□ -0.37
LINC00477-201ENST00000483544 E2F7Q96AV8 911 aa12.74□□□□□ -0.37
LINC00477-201ENST00000483544 SLC10A4Q96EP9 437 aa12.74□□□□□ -0.37
LINC00477-201ENST00000483544 BIRC8Q96P09 236 aa12.74□□□□□ -0.37
LINC00477-201ENST00000483544 SLC9A7Q96T83 725 aa12.74□□□□□ -0.37
LINC00477-201ENST00000483544 TMEM120AQ9BXJ8 343 aa12.74□□□□□ -0.37
LINC00477-201ENST00000483544 DHX35Q9H5Z1 703 aaKnown RBP12.74□□□□□ -0.37
LINC00477-201ENST00000483544 GPATCH2LQ9NWQ4 482 aa12.74□□□□□ -0.37
LINC00477-201ENST00000483544 SNTG2Q9NY99 539 aa12.74□□□□□ -0.37
LINC00477-201ENST00000483544 MOCS1Q9NZB8 636 aa12.74□□□□□ -0.37
LINC00477-201ENST00000483544 KANSL3Q9P2N6 904 aa12.74□□□□□ -0.37
LINC00477-201ENST00000483544 WDR91A4D1P6 747 aa12.73□□□□□ -0.37
LINC00477-201ENST00000483544 MBLAC1A4D2B0 266 aaPredicted RBP12.73□□□□□ -0.37
LINC00477-201ENST00000483544 SDR42E2A6NKP2 422 aa12.73□□□□□ -0.37
LINC00477-201ENST00000483544 SGTAO43765 313 aa12.73□□□□□ -0.37
LINC00477-201ENST00000483544 GPR32O75388 356 aa12.73□□□□□ -0.37
LINC00477-201ENST00000483544 CSDE1O75534 798 aaKnown RBP12.73□□□□□ -0.37
LINC00477-201ENST00000483544 RFPL1O75677 317 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms