RNA–Protein interactions for RNA: ENST00000478349.6

SMARCE1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-209ENST00000478349 PRPF39Q86UA1 669 aaKnown RBP14.86□□□□□ -0.03
SMARCE1-209ENST00000478349 CIR1Q86X95 450 aaPredicted RBP14.86□□□□□ -0.03
SMARCE1-209ENST00000478349 FAM71AQ8IYT1 594 aa14.86□□□□□ -0.03
SMARCE1-209ENST00000478349 TBC1D3Q8IZP1 549 aaPredicted RBP14.86□□□□□ -0.03
SMARCE1-209ENST00000478349 PTPRN2Q92932 1015 aa14.86□□□□□ -0.03
SMARCE1-209ENST00000478349 SERAC1Q96JX3 654 aa14.86□□□□□ -0.03
SMARCE1-209ENST00000478349 SLC6A18Q96N87 628 aa14.86□□□□□ -0.03
SMARCE1-209ENST00000478349 ELF4Q99607 663 aaPredicted RBP14.86□□□□□ -0.03
SMARCE1-209ENST00000478349 TUBGCP2Q9BSJ2 902 aa14.86□□□□□ -0.03
SMARCE1-209ENST00000478349 CLSTN2Q9H4D0 955 aa14.86□□□□□ -0.03
SMARCE1-209ENST00000478349 CCDC86Q9H6F5 360 aaKnown RBP14.86□□□□□ -0.03
SMARCE1-209ENST00000478349 WDCPQ9H6R7 721 aa14.86□□□□□ -0.03
SMARCE1-209ENST00000478349 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.86□□□□□ -0.03
SMARCE1-209ENST00000478349 SERGEFQ9UGK8 458 aa14.86□□□□□ -0.03
SMARCE1-209ENST00000478349 VANGL2Q9ULK5 521 aa14.86□□□□□ -0.03
SMARCE1-209ENST00000478349 A0A1B0GTQ1 180 aa14.85□□□□□ -0.03
SMARCE1-209ENST00000478349 ATP9BO43861 1147 aa14.85□□□□□ -0.03
SMARCE1-209ENST00000478349 PAGE1O75459 146 aa14.85□□□□□ -0.03
SMARCE1-209ENST00000478349 ERBB2P04626 1255 aa14.85□□□□□ -0.03
SMARCE1-209ENST00000478349 RHOCP08134 193 aa14.85□□□□□ -0.03
SMARCE1-209ENST00000478349 STK19P49842 368 aaPredicted RBP14.85□□□□□ -0.03
SMARCE1-209ENST00000478349 SULT1E1P49888 294 aa14.85□□□□□ -0.03
SMARCE1-209ENST00000478349 CLCN6P51797 869 aa14.85□□□□□ -0.03
SMARCE1-209ENST00000478349 PITX1P78337 314 aaPredicted RBP14.85□□□□□ -0.03
SMARCE1-209ENST00000478349 CENPCQ03188 943 aa14.85□□□□□ -0.03
SMARCE1-209ENST00000478349 PTPN20Q4JDL3 420 aa14.85□□□□□ -0.03
SMARCE1-209ENST00000478349 SETMARQ53H47 684 aaPredicted RBP14.85□□□□□ -0.03
SMARCE1-209ENST00000478349 C6orf118Q5T5N4 469 aa14.85□□□□□ -0.03
SMARCE1-209ENST00000478349 NAPEPLDQ6IQ20 393 aa14.85□□□□□ -0.03
SMARCE1-209ENST00000478349 CXorf57Q6NSI4 855 aaKnown RBP14.85□□□□□ -0.03
SMARCE1-209ENST00000478349 CCNI2Q6ZMN8 369 aaPredicted RBP14.85□□□□□ -0.03
SMARCE1-209ENST00000478349 SETD3Q86TU7 594 aaPredicted RBP14.85□□□□□ -0.03
SMARCE1-209ENST00000478349 SLC47A2Q86VL8 602 aa14.85□□□□□ -0.03
SMARCE1-209ENST00000478349 PROSER1Q86XN7 944 aa14.85□□□□□ -0.03
SMARCE1-209ENST00000478349 WDTC1Q8N5D0 677 aa14.85□□□□□ -0.03
SMARCE1-209ENST00000478349 AADATQ8N5Z0 425 aa14.85□□□□□ -0.03
SMARCE1-209ENST00000478349 PNPLA1Q8N8W4 532 aa14.85□□□□□ -0.03
SMARCE1-209ENST00000478349 FAM129BQ96TA1 746 aa14.85□□□□□ -0.03
SMARCE1-209ENST00000478349 FEM1AQ9BSK4 669 aa14.85□□□□□ -0.03
SMARCE1-209ENST00000478349 NUP62CLQ9H1M0 184 aa14.85□□□□□ -0.03
SMARCE1-209ENST00000478349 DYRK4Q9NR20 520 aa14.85□□□□□ -0.03
SMARCE1-209ENST00000478349 TBC1D30Q9Y2I9 924 aa14.85□□□□□ -0.03
SMARCE1-209ENST00000478349 HS3ST4Q9Y661 456 aa14.85□□□□□ -0.03
SMARCE1-209ENST00000478349 CEP192Q8TEP8 1941 aa14.85□□□□□ -0.03
SMARCE1-209ENST00000478349 FOXN3O00409 490 aaPredicted RBP14.84□□□□□ -0.03
SMARCE1-209ENST00000478349 MCF2LO15068 1137 aa14.84□□□□□ -0.03
SMARCE1-209ENST00000478349 ITGAVP06756 1048 aa14.84□□□□□ -0.03
SMARCE1-209ENST00000478349 EEF1GP26641 437 aaKnown RBP14.84□□□□□ -0.03
SMARCE1-209ENST00000478349 HNF1BP35680 557 aa14.84□□□□□ -0.03
SMARCE1-209ENST00000478349 RECQLP46063 649 aaPredicted RBP14.84□□□□□ -0.03
SMARCE1-209ENST00000478349 DEUP1Q05D60 604 aa14.84□□□□□ -0.03
SMARCE1-209ENST00000478349 FAM102AQ5T9C2 384 aaPredicted RBP14.84□□□□□ -0.03
SMARCE1-209ENST00000478349 LAYNQ6UX15 382 aa14.84□□□□□ -0.03
SMARCE1-209ENST00000478349 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.84□□□□□ -0.03
SMARCE1-209ENST00000478349 TMPRSS7Q7RTY8 843 aa14.84□□□□□ -0.03
SMARCE1-209ENST00000478349 IQCHQ86VS3 1027 aa14.84□□□□□ -0.03
SMARCE1-209ENST00000478349 ERICH1Q86X53 443 aa14.84□□□□□ -0.03
SMARCE1-209ENST00000478349 IRF2BP1Q8IU81 584 aa14.84□□□□□ -0.03
SMARCE1-209ENST00000478349 C18orf8Q96DM3 657 aa14.84□□□□□ -0.03
SMARCE1-209ENST00000478349 PGAP3Q96FM1 320 aaPredicted RBP14.84□□□□□ -0.03
SMARCE1-209ENST00000478349 PPP1R16AQ96I34 528 aa14.84□□□□□ -0.03
SMARCE1-209ENST00000478349 TKTL2Q9H0I9 626 aa14.84□□□□□ -0.03
SMARCE1-209ENST00000478349 SIK2Q9H0K1 926 aa14.84□□□□□ -0.03
SMARCE1-209ENST00000478349 PREBQ9HCU5 417 aa14.84□□□□□ -0.03
SMARCE1-209ENST00000478349 SIX2Q9NPC8 291 aa14.84□□□□□ -0.03
SMARCE1-209ENST00000478349 HS3ST2Q9Y278 367 aa14.84□□□□□ -0.03
SMARCE1-209ENST00000478349 DAAM1Q9Y4D1 1078 aa14.84□□□□□ -0.03
SMARCE1-209ENST00000478349 SLCO1B1Q9Y6L6 691 aa14.84□□□□□ -0.03
SMARCE1-209ENST00000478349 GOLGA8CPA6NN73 597 aa14.83□□□□□ -0.04
SMARCE1-209ENST00000478349 E9PAM4 449 aa14.83□□□□□ -0.04
SMARCE1-209ENST00000478349 LATO43561 262 aa14.83□□□□□ -0.04
SMARCE1-209ENST00000478349 PLRG1O43660 514 aaKnown RBP14.83□□□□□ -0.04
SMARCE1-209ENST00000478349 PRNPP04156 253 aa14.83□□□□□ -0.04
SMARCE1-209ENST00000478349 ATXN1LP0C7T5 689 aaKnown RBP14.83□□□□□ -0.04
SMARCE1-209ENST00000478349 CYP11B1P15538 503 aa14.83□□□□□ -0.04
SMARCE1-209ENST00000478349 CDH5P33151 784 aaPredicted RBP14.83□□□□□ -0.04
SMARCE1-209ENST00000478349 CLCN1P35523 988 aa14.83□□□□□ -0.04
SMARCE1-209ENST00000478349 CXCR3P49682 368 aa14.83□□□□□ -0.04
SMARCE1-209ENST00000478349 RNASE9P60153 205 aaKnown RBP14.83□□□□□ -0.04
SMARCE1-209ENST00000478349 APBA1Q02410 837 aa14.83□□□□□ -0.04
SMARCE1-209ENST00000478349 SCAPQ12770 1279 aa14.83□□□□□ -0.04
SMARCE1-209ENST00000478349 KCNJ12Q14500 433 aa14.83□□□□□ -0.04
SMARCE1-209ENST00000478349 DRAP1Q14919 205 aaPredicted RBP14.83□□□□□ -0.04
SMARCE1-209ENST00000478349 DLG2Q15700 870 aa14.83□□□□□ -0.04
SMARCE1-209ENST00000478349 SLC25A52Q3SY17 297 aa14.83□□□□□ -0.04
SMARCE1-209ENST00000478349 C5orf22Q49AR2 442 aa14.83□□□□□ -0.04
SMARCE1-209ENST00000478349 HS1BP3Q53T59 392 aa14.83□□□□□ -0.04
SMARCE1-209ENST00000478349 ZNF783Q6ZMS7 281 aa14.83□□□□□ -0.04
SMARCE1-209ENST00000478349 SLCO6A1Q86UG4 719 aa14.83□□□□□ -0.04
SMARCE1-209ENST00000478349 TRIM69Q86WT6 500 aa14.83□□□□□ -0.04
SMARCE1-209ENST00000478349 ZNF677Q86XU0 584 aa14.83□□□□□ -0.04
SMARCE1-209ENST00000478349 SH2D3CQ8N5H7 860 aa14.83□□□□□ -0.04
SMARCE1-209ENST00000478349 MFSD2AQ8NA29 543 aa14.83□□□□□ -0.04
SMARCE1-209ENST00000478349 DCAF4L2Q8NA75 395 aa14.83□□□□□ -0.04
SMARCE1-209ENST00000478349 ATP11CQ8NB49 1132 aa14.83□□□□□ -0.04
SMARCE1-209ENST00000478349 FRS2Q8WU20 508 aa14.83□□□□□ -0.04
SMARCE1-209ENST00000478349 NPY6RQ99463 290 aa14.83□□□□□ -0.04
SMARCE1-209ENST00000478349 ORAI3Q9BRQ5 295 aa14.83□□□□□ -0.04
SMARCE1-209ENST00000478349 ERVMER34-1Q9H9K5 563 aa14.83□□□□□ -0.04
SMARCE1-209ENST00000478349 PIGVQ9NUD9 493 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms