RNA–Protein interactions for RNA: ENST00000475243.5

VAPB-204, Transcript of VAMP associated protein B and C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPB, Length 7,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-204ENST00000475243 SMIM31A0A1B0GVY4 71 aa11.14□□□□□ -0.63
VAPB-204ENST00000475243 TRIM24O15164 1050 aa11.14□□□□□ -0.63
VAPB-204ENST00000475243 PIAS1O75925 651 aa11.14□□□□□ -0.63
VAPB-204ENST00000475243 PAICSP22234 425 aaKnown RBP11.14□□□□□ -0.63
VAPB-204ENST00000475243 RAB27AP51159 221 aa11.14□□□□□ -0.63
VAPB-204ENST00000475243 POLR2LP62875 67 aaKnown RBP11.14□□□□□ -0.63
VAPB-204ENST00000475243 DENND1CQ8IV53 801 aa11.14□□□□□ -0.63
VAPB-204ENST00000475243 MFSD1Q9H3U5 465 aa11.14□□□□□ -0.63
VAPB-204ENST00000475243 ZNHIT2Q9UHR6 403 aa11.14□□□□□ -0.63
VAPB-204ENST00000475243 SLC27A5Q9Y2P5 690 aa11.14□□□□□ -0.63
VAPB-204ENST00000475243 TRPV2Q9Y5S1 764 aa11.14□□□□□ -0.63
VAPB-204ENST00000475243 DDX3XO00571 662 aaKnown RBP eCLIP11.14□□□□□ -0.637e-11■□□□□ 10.9
VAPB-204ENST00000475243 RPA3P35244 121 aaPredicted RBP11.14□□□□□ -0.63
VAPB-204ENST00000475243 PKNOX1P55347 436 aa11.14□□□□□ -0.63
VAPB-204ENST00000475243 LPCAT2Q7L5N7 544 aa11.14□□□□□ -0.63
VAPB-204ENST00000475243 DHFR2Q86XF0 187 aa11.14□□□□□ -0.63
VAPB-204ENST00000475243 MIEF2Q96C03 454 aa11.14□□□□□ -0.63
VAPB-204ENST00000475243 ZCCHC2Q9C0B9 1178 aaKnown RBP11.14□□□□□ -0.63
VAPB-204ENST00000475243 GANQ9H2C0 597 aa11.14□□□□□ -0.63
VAPB-204ENST00000475243 RAD21L1Q9H4I0 556 aa11.14□□□□□ -0.63
VAPB-204ENST00000475243 POPDC2Q9HBU9 364 aa11.14□□□□□ -0.63
VAPB-204ENST00000475243 OPTCQ9UBM4 332 aa11.14□□□□□ -0.63
VAPB-204ENST00000475243 PPP2R3BQ9Y5P8 575 aa11.14□□□□□ -0.63
VAPB-204ENST00000475243 MANSC4A6NHS7 340 aaPredicted RBP11.14□□□□□ -0.63
VAPB-204ENST00000475243 AP5Z1O43299 807 aa11.14□□□□□ -0.63
VAPB-204ENST00000475243 SERPINE1P05121 402 aa11.14□□□□□ -0.63
VAPB-204ENST00000475243 MAPTP10636 758 aaKnown RBP11.14□□□□□ -0.63
VAPB-204ENST00000475243 VAV1P15498 845 aa11.14□□□□□ -0.63
VAPB-204ENST00000475243 USP45Q70EL2 814 aa11.14□□□□□ -0.63
VAPB-204ENST00000475243 DTNBP1Q96EV8 351 aa11.14□□□□□ -0.63
VAPB-204ENST00000475243 CDRT15Q96T59 188 aa11.14□□□□□ -0.63
VAPB-204ENST00000475243 OLFM1Q99784 485 aa11.14□□□□□ -0.63
VAPB-204ENST00000475243 CORO1BQ9BR76 489 aa11.14□□□□□ -0.63
VAPB-204ENST00000475243 FHDC1Q9C0D6 1143 aaPredicted RBP11.14□□□□□ -0.63
VAPB-204ENST00000475243 ANKZF1Q9H8Y5 726 aa11.14□□□□□ -0.63
VAPB-204ENST00000475243 NFASCO94856 1347 aa11.14□□□□□ -0.63
VAPB-204ENST00000475243 BMP10O95393 424 aa11.14□□□□□ -0.63
VAPB-204ENST00000475243 PGK1P00558 417 aa11.14□□□□□ -0.63
VAPB-204ENST00000475243 VGLL4Q14135 290 aa11.14□□□□□ -0.63
VAPB-204ENST00000475243 NRF1Q16656 503 aa11.14□□□□□ -0.63
VAPB-204ENST00000475243 GLIS3Q8NEA6 775 aa11.14□□□□□ -0.63
VAPB-204ENST00000475243 OR52K1Q8NGK4 314 aa11.14□□□□□ -0.63
VAPB-204ENST00000475243 GPR152Q8TDT2 470 aa11.14□□□□□ -0.63
VAPB-204ENST00000475243 ZNF75CPQ92670 426 aaPredicted RBP11.14□□□□□ -0.63
VAPB-204ENST00000475243 LPPQ93052 612 aa11.14□□□□□ -0.63
VAPB-204ENST00000475243 TRHDEQ9UKU6 1024 aa11.14□□□□□ -0.63
VAPB-204ENST00000475243 L1RE1Q9UN81 338 aa11.14□□□□□ -0.63
VAPB-204ENST00000475243 LRRIQ1Q96JM4 1722 aa11.14□□□□□ -0.63
VAPB-204ENST00000475243 LBPP18428 481 aa11.14□□□□□ -0.63
VAPB-204ENST00000475243 CCL23P55773 120 aa11.14□□□□□ -0.63
VAPB-204ENST00000475243 TMC3Q7Z5M5 1100 aa11.14□□□□□ -0.63
VAPB-204ENST00000475243 SAPCD2Q86UD0 394 aa11.14□□□□□ -0.63
VAPB-204ENST00000475243 CLYBLQ8N0X4 340 aa11.14□□□□□ -0.63
VAPB-204ENST00000475243 GDPD5Q8WTR4 605 aa11.14□□□□□ -0.63
VAPB-204ENST00000475243 MRPS26Q9BYN8 205 aaKnown RBP11.14□□□□□ -0.63
VAPB-204ENST00000475243 ALG9Q9H6U8 611 aa11.14□□□□□ -0.63
VAPB-204ENST00000475243 KLQ9UEF7 1012 aa11.14□□□□□ -0.63
VAPB-204ENST00000475243 LYVE1Q9Y5Y7 322 aa11.14□□□□□ -0.63
VAPB-204ENST00000475243 WTIPA6NIX2 430 aaPredicted RBP11.14□□□□□ -0.63
VAPB-204ENST00000475243 H3BQF6 201 aa11.14□□□□□ -0.63
VAPB-204ENST00000475243 RGS14O43566 566 aa11.14□□□□□ -0.63
VAPB-204ENST00000475243 PTPN1P18031 435 aaKnown RBP11.14□□□□□ -0.63
VAPB-204ENST00000475243 HPCAL1P37235 193 aa11.14□□□□□ -0.63
VAPB-204ENST00000475243 PFKPQ01813 784 aa11.14□□□□□ -0.63
VAPB-204ENST00000475243 ZC3H12AQ5D1E8 599 aaKnown RBP11.14□□□□□ -0.63
VAPB-204ENST00000475243 SYT12Q8IV01 421 aa11.14□□□□□ -0.63
VAPB-204ENST00000475243 KIAA0319LQ8IZA0 1049 aa11.14□□□□□ -0.63
VAPB-204ENST00000475243 SUSD6Q92537 303 aa11.14□□□□□ -0.63
VAPB-204ENST00000475243 CHST7Q9NS84 486 aa11.14□□□□□ -0.63
VAPB-204ENST00000475243 NINJ2Q9NZG7 142 aa11.14□□□□□ -0.63
VAPB-204ENST00000475243 MROH7Q68CQ1 1323 aa11.14□□□□□ -0.63
VAPB-204ENST00000475243 CYP2A6P11509 494 aaPredicted RBP11.13□□□□□ -0.63
VAPB-204ENST00000475243 ATP5C1P36542 298 aaKnown RBP11.13□□□□□ -0.63
VAPB-204ENST00000475243 HNF4AP41235 474 aa11.13□□□□□ -0.63
VAPB-204ENST00000475243 SERPINH1P50454 418 aaKnown RBP11.13□□□□□ -0.63
VAPB-204ENST00000475243 SCNN1GP51170 649 aa11.13□□□□□ -0.63
VAPB-204ENST00000475243 DPYSL3Q14195 570 aa11.13□□□□□ -0.63
VAPB-204ENST00000475243 SAMD3Q8N6K7 520 aa11.13□□□□□ -0.63
VAPB-204ENST00000475243 LRRN4CLQ8ND94 238 aa11.13□□□□□ -0.63
VAPB-204ENST00000475243 OR6Y1Q8NGX8 325 aa11.13□□□□□ -0.63
VAPB-204ENST00000475243 DNAJC18Q9H819 358 aa11.13□□□□□ -0.63
VAPB-204ENST00000475243 OR12D3Q9UGF7 316 aa11.13□□□□□ -0.63
VAPB-204ENST00000475243 CEMIPQ8WUJ3 1361 aa11.13□□□□□ -0.63
VAPB-204ENST00000475243 XYLBO75191 536 aa11.13□□□□□ -0.63
VAPB-204ENST00000475243 FCGR1AP12314 374 aa11.13□□□□□ -0.63
VAPB-204ENST00000475243 EPORP19235 508 aa11.13□□□□□ -0.63
VAPB-204ENST00000475243 CASP5P51878 434 aa11.13□□□□□ -0.63
VAPB-204ENST00000475243 THOP1P52888 689 aa11.13□□□□□ -0.63
VAPB-204ENST00000475243 MAD2L1Q13257 205 aaPredicted RBP11.13□□□□□ -0.63
VAPB-204ENST00000475243 DGKZQ13574 1117 aa11.13□□□□□ -0.63
VAPB-204ENST00000475243 ZSWIM7Q19AV6 140 aa11.13□□□□□ -0.63
VAPB-204ENST00000475243 ELMO1Q92556 727 aa11.13□□□□□ -0.63
VAPB-204ENST00000475243 KAT5Q92993 513 aa11.13□□□□□ -0.63
VAPB-204ENST00000475243 NDNQ99608 321 aa11.13□□□□□ -0.63
VAPB-204ENST00000475243 POLR1EQ9GZS1 481 aaKnown RBP11.13□□□□□ -0.63
VAPB-204ENST00000475243 EPS8L2Q9H6S3 715 aa11.13□□□□□ -0.63
VAPB-204ENST00000475243 RRN3Q9NYV6 651 aa11.13□□□□□ -0.63
VAPB-204ENST00000475243 TAS2R14Q9NYV8 317 aa11.13□□□□□ -0.63
VAPB-204ENST00000475243 UXTQ9UBK9 157 aaPredicted RBP11.13□□□□□ -0.63
VAPB-204ENST00000475243 MKL2Q9ULH7 1088 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms