RNA–Protein interactions for RNA: ENST00000474215.5

CKS1B-206, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 739 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-206ENST00000474215 CDO1Q16878 200 aa11.49□□□□□ -0.57
CKS1B-206ENST00000474215 C15orf59Q2T9L4 293 aaPredicted RBP11.49□□□□□ -0.57
CKS1B-206ENST00000474215 ARL13BQ3SXY8 428 aa11.49□□□□□ -0.57
CKS1B-206ENST00000474215 ACCSLQ4AC99 568 aa11.49□□□□□ -0.57
CKS1B-206ENST00000474215 RAB6CQ53S08 254 aa11.49□□□□□ -0.57
CKS1B-206ENST00000474215 ARTNQ5T4W7 220 aa11.49□□□□□ -0.57
CKS1B-206ENST00000474215 DCAF12L1Q5VU92 463 aa11.49□□□□□ -0.57
CKS1B-206ENST00000474215 ACAD10Q6JQN1 1059 aa11.49□□□□□ -0.57
CKS1B-206ENST00000474215 WDR59Q6PJI9 974 aa11.49□□□□□ -0.57
CKS1B-206ENST00000474215 MON1BQ7L1V2 547 aa11.49□□□□□ -0.57
CKS1B-206ENST00000474215 STRADAQ7RTN6 431 aa11.49□□□□□ -0.57
CKS1B-206ENST00000474215 MMAAQ8IVH4 418 aaKnown RBP11.49□□□□□ -0.57
CKS1B-206ENST00000474215 STK40Q8N2I9 435 aa11.49□□□□□ -0.57
CKS1B-206ENST00000474215 C3orf20Q8ND61 904 aa11.49□□□□□ -0.57
CKS1B-206ENST00000474215 GANCQ8TET4 914 aa11.49□□□□□ -0.57
CKS1B-206ENST00000474215 FRS2Q8WU20 508 aa11.49□□□□□ -0.57
CKS1B-206ENST00000474215 CENPIQ92674 756 aaPredicted RBP11.49□□□□□ -0.57
CKS1B-206ENST00000474215 SELENOOQ9BVL4 669 aa11.49□□□□□ -0.57
CKS1B-206ENST00000474215 GTPBP2Q9BX10 602 aaKnown RBP11.49□□□□□ -0.57
CKS1B-206ENST00000474215 RAB6CQ9H0N0 254 aa11.49□□□□□ -0.57
CKS1B-206ENST00000474215 MUC3BQ9H195 1237 aa11.49□□□□□ -0.57
CKS1B-206ENST00000474215 MIR1-1HGQ9H1L0 117 aa11.49□□□□□ -0.57
CKS1B-206ENST00000474215 SGK2Q9HBY8 427 aa11.49□□□□□ -0.57
CKS1B-206ENST00000474215 CBX8Q9HC52 389 aa11.49□□□□□ -0.57
CKS1B-206ENST00000474215 FSCN3Q9NQT6 498 aa11.49□□□□□ -0.57
CKS1B-206ENST00000474215 FBXL12Q9NXK8 326 aa11.49□□□□□ -0.57
CKS1B-206ENST00000474215 MPP6Q9NZW5 540 aa11.49□□□□□ -0.57
CKS1B-206ENST00000474215 OR12D3Q9UGF7 316 aa11.49□□□□□ -0.57
CKS1B-206ENST00000474215 SLC25A13Q9UJS0 675 aa11.49□□□□□ -0.57
CKS1B-206ENST00000474215 NUP205Q92621 2012 aa11.48□□□□□ -0.57
CKS1B-206ENST00000474215 DNAH14Q0VDD8 3507 aa11.48□□□□□ -0.57
CKS1B-206ENST00000474215 A0A1B0GTW7 788 aa11.48□□□□□ -0.57
CKS1B-206ENST00000474215 TCRBV5S1A1TA0A578 114 aa11.48□□□□□ -0.57
CKS1B-206ENST00000474215 LRRC53A6NM62 1247 aa11.48□□□□□ -0.57
CKS1B-206ENST00000474215 ATP9BO43861 1147 aa11.48□□□□□ -0.57
CKS1B-206ENST00000474215 VAV1P15498 845 aa11.48□□□□□ -0.57
CKS1B-206ENST00000474215 GPD1P21695 349 aa11.48□□□□□ -0.57
CKS1B-206ENST00000474215 OR1E1P30953 314 aa11.48□□□□□ -0.57
CKS1B-206ENST00000474215 KRT83P78385 493 aa11.48□□□□□ -0.57
CKS1B-206ENST00000474215 ELAVL3Q14576 367 aaKnown RBP11.48□□□□□ -0.57
CKS1B-206ENST00000474215 DLG2Q15700 870 aa11.48□□□□□ -0.57
CKS1B-206ENST00000474215 UAP1L1Q3KQV9 507 aa11.48□□□□□ -0.57
CKS1B-206ENST00000474215 C6orf118Q5T5N4 469 aa11.48□□□□□ -0.57
CKS1B-206ENST00000474215 ZNF783Q6ZMS7 281 aa11.48□□□□□ -0.57
CKS1B-206ENST00000474215 TFAP2DQ7Z6R9 452 aa11.48□□□□□ -0.57
CKS1B-206ENST00000474215 LUZP1Q86V48 1076 aa11.48□□□□□ -0.57
CKS1B-206ENST00000474215 MCOLN2Q8IZK6 566 aa11.48□□□□□ -0.57
CKS1B-206ENST00000474215 C1orf216Q8TAB5 229 aa11.48□□□□□ -0.57
CKS1B-206ENST00000474215 VCPIP1Q96JH7 1222 aa11.48□□□□□ -0.57
CKS1B-206ENST00000474215 OMDQ99983 421 aa11.48□□□□□ -0.57
CKS1B-206ENST00000474215 SYT11Q9BT88 431 aa11.48□□□□□ -0.57
CKS1B-206ENST00000474215 C2orf49Q9BVC5 232 aaPredicted RBP11.48□□□□□ -0.57
CKS1B-206ENST00000474215 EDEM3Q9BZQ6 932 aa11.48□□□□□ -0.57
CKS1B-206ENST00000474215 ZYG11BQ9C0D3 744 aa11.48□□□□□ -0.57
CKS1B-206ENST00000474215 OSBPL2Q9H1P3 480 aa11.48□□□□□ -0.57
CKS1B-206ENST00000474215 NEUROG2Q9H2A3 272 aa11.48□□□□□ -0.57
CKS1B-206ENST00000474215 C6orf106Q9H6K1 298 aaPredicted RBP11.48□□□□□ -0.57
CKS1B-206ENST00000474215 AIPL1Q9NZN9 384 aa11.48□□□□□ -0.57
CKS1B-206ENST00000474215 PPARGC1AQ9UBK2 798 aaKnown RBP11.48□□□□□ -0.57
CKS1B-206ENST00000474215 EIF2B4Q9UI10 523 aaKnown RBP11.48□□□□□ -0.57
CKS1B-206ENST00000474215 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.48□□□□□ -0.57
CKS1B-206ENST00000474215 TNRC6BQ9UPQ9 1833 aaKnown RBP11.48□□□□□ -0.57
CKS1B-206ENST00000474215 A0A0D9SEW6 157 aa11.47□□□□□ -0.57
CKS1B-206ENST00000474215 ILVBLA1L0T0 632 aa11.47□□□□□ -0.57
CKS1B-206ENST00000474215 ANKRD62A6NC57 917 aa11.47□□□□□ -0.57
CKS1B-206ENST00000474215 MID1O15344 667 aa11.47□□□□□ -0.57
CKS1B-206ENST00000474215 BCAT2O15382 392 aaPredicted RBP11.47□□□□□ -0.57
CKS1B-206ENST00000474215 RNASEH2AO75792 299 aaKnown RBP11.47□□□□□ -0.57
CKS1B-206ENST00000474215 KCNK5O95279 499 aa11.47□□□□□ -0.57
CKS1B-206ENST00000474215 ADH1BP00325 375 aa11.47□□□□□ -0.57
CKS1B-206ENST00000474215 MT-CO1P00395 513 aa11.47□□□□□ -0.57
CKS1B-206ENST00000474215 IL1BP01584 269 aa11.47□□□□□ -0.57
CKS1B-206ENST00000474215 GOT1P17174 413 aa11.47□□□□□ -0.57
CKS1B-206ENST00000474215 C5AR1P21730 350 aa11.47□□□□□ -0.57
CKS1B-206ENST00000474215 PSMD8P48556 350 aa11.47□□□□□ -0.57
CKS1B-206ENST00000474215 ZNF143P52747 638 aaPredicted RBP11.47□□□□□ -0.57
CKS1B-206ENST00000474215 GALCP54803 685 aa11.47□□□□□ -0.57
CKS1B-206ENST00000474215 HDAC4P56524 1084 aa11.47□□□□□ -0.57
CKS1B-206ENST00000474215 NRG1Q02297 640 aaPredicted RBP11.47□□□□□ -0.57
CKS1B-206ENST00000474215 ASIC2Q16515 512 aa11.47□□□□□ -0.57
CKS1B-206ENST00000474215 SKOR2Q2VWA4 1001 aaPredicted RBP11.47□□□□□ -0.57
CKS1B-206ENST00000474215 PPP1R15BQ5SWA1 713 aa11.47□□□□□ -0.57
CKS1B-206ENST00000474215 SFMBT2Q5VUG0 894 aa11.47□□□□□ -0.57
CKS1B-206ENST00000474215 PPP1R2P3Q6NXS1 205 aa11.47□□□□□ -0.57
CKS1B-206ENST00000474215 DNAJC24Q6P3W2 148 aa11.47□□□□□ -0.57
CKS1B-206ENST00000474215 DSG4Q86SJ6 1040 aa11.47□□□□□ -0.57
CKS1B-206ENST00000474215 ZCCHC9Q8N567 271 aaKnown RBP11.47□□□□□ -0.57
CKS1B-206ENST00000474215 SH2D3CQ8N5H7 860 aa11.47□□□□□ -0.57
CKS1B-206ENST00000474215 MINDY1Q8N5J2 469 aa11.47□□□□□ -0.57
CKS1B-206ENST00000474215 FAM172AQ8WUF8 416 aa11.47□□□□□ -0.57
CKS1B-206ENST00000474215 BIRC7Q96CA5 298 aa11.47□□□□□ -0.57
CKS1B-206ENST00000474215 PSMB7Q99436 277 aa11.47□□□□□ -0.57
CKS1B-206ENST00000474215 ZDHHC5Q9C0B5 715 aa11.47□□□□□ -0.57
CKS1B-206ENST00000474215 RETREG1Q9H6L5 497 aa11.47□□□□□ -0.57
CKS1B-206ENST00000474215 ZNF212Q9UDV6 495 aa11.47□□□□□ -0.57
CKS1B-206ENST00000474215 SERGEFQ9UGK8 458 aa11.47□□□□□ -0.57
CKS1B-206ENST00000474215 ADAMTS1Q9UHI8 967 aa11.47□□□□□ -0.57
CKS1B-206ENST00000474215 VPS51Q9UID3 782 aa11.47□□□□□ -0.57
CKS1B-206ENST00000474215 FZD4Q9ULV1 537 aa11.47□□□□□ -0.57
CKS1B-206ENST00000474215 HS3ST2Q9Y278 367 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms