RNA–Protein interactions for RNA: ENST00000473376.1

CHD3-209, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-209ENST00000473376 NT5C3BQ969T7 300 aa13.94□□□□□ -0.18
CHD3-209ENST00000473376 C1orf74Q96LT6 269 aa13.94□□□□□ -0.18
CHD3-209ENST00000473376 CPXM1Q96SM3 734 aa13.94□□□□□ -0.18
CHD3-209ENST00000473376 MTG2Q9H4K7 406 aa13.94□□□□□ -0.18
CHD3-209ENST00000473376 RETREG1Q9H6L5 497 aa13.94□□□□□ -0.18
CHD3-209ENST00000473376 FAM204AQ9H8W3 233 aa13.94□□□□□ -0.18
CHD3-209ENST00000473376 EBF2Q9HAK2 575 aa13.94□□□□□ -0.18
CHD3-209ENST00000473376 FTSJ1Q9UET6 329 aa13.94□□□□□ -0.18
CHD3-209ENST00000473376 HS3ST2Q9Y278 367 aa13.94□□□□□ -0.18
CHD3-209ENST00000473376 OR51B4Q9Y5P0 310 aa13.94□□□□□ -0.18
CHD3-209ENST00000473376 NUMA1Q14980 2115 aa13.94□□□□□ -0.18
CHD3-209ENST00000473376 CACNA1GO43497 2377 aa13.93□□□□□ -0.18
CHD3-209ENST00000473376 FAM47DPA6NHR8 397 aa13.93□□□□□ -0.18
CHD3-209ENST00000473376 C1QTNF3-AMACRE9PGA6 284 aa13.93□□□□□ -0.18
CHD3-209ENST00000473376 PLRG1O43660 514 aaKnown RBP13.93□□□□□ -0.18
CHD3-209ENST00000473376 DAB1O75553 588 aa13.93□□□□□ -0.18
CHD3-209ENST00000473376 IL1BP01584 269 aa13.93□□□□□ -0.18
CHD3-209ENST00000473376 PDGFRAP16234 1089 aa13.93□□□□□ -0.18
CHD3-209ENST00000473376 SLC9A1P19634 815 aa13.93□□□□□ -0.18
CHD3-209ENST00000473376 CDH5P33151 784 aaPredicted RBP13.93□□□□□ -0.18
CHD3-209ENST00000473376 KRT9P35527 623 aa13.93□□□□□ -0.18
CHD3-209ENST00000473376 CLCN6P51797 869 aa13.93□□□□□ -0.18
CHD3-209ENST00000473376 NXPH1P58417 271 aa13.93□□□□□ -0.18
CHD3-209ENST00000473376 UBE2HP62256 183 aa13.93□□□□□ -0.18
CHD3-209ENST00000473376 KRT83P78385 493 aa13.93□□□□□ -0.18
CHD3-209ENST00000473376 SLC6A3Q01959 620 aa13.93□□□□□ -0.18
CHD3-209ENST00000473376 CT47A1Q5JQC4 288 aaPredicted RBP13.93□□□□□ -0.18
CHD3-209ENST00000473376 SETD3Q86TU7 594 aaPredicted RBP13.93□□□□□ -0.18
CHD3-209ENST00000473376 IRF2BP1Q8IU81 584 aa13.93□□□□□ -0.18
CHD3-209ENST00000473376 FAM114A1Q8IWE2 563 aa13.93□□□□□ -0.18
CHD3-209ENST00000473376 OR14C36Q8NHC7 312 aa13.93□□□□□ -0.18
CHD3-209ENST00000473376 SERAC1Q96JX3 654 aa13.93□□□□□ -0.18
CHD3-209ENST00000473376 RPL10LQ96L21 214 aaKnown RBP13.93□□□□□ -0.18
CHD3-209ENST00000473376 CCDC114Q96M63 670 aa13.93□□□□□ -0.18
CHD3-209ENST00000473376 SLC6A18Q96N87 628 aa13.93□□□□□ -0.18
CHD3-209ENST00000473376 RPRD1AQ96P16 312 aaPredicted RBP13.93□□□□□ -0.18
CHD3-209ENST00000473376 NPY6RQ99463 290 aa13.93□□□□□ -0.18
CHD3-209ENST00000473376 PREBQ9HCU5 417 aa13.93□□□□□ -0.18
CHD3-209ENST00000473376 ARHGEF38Q9NXL2 777 aa13.93□□□□□ -0.18
CHD3-209ENST00000473376 ARHGAP20Q9P2F6 1191 aa13.93□□□□□ -0.18
CHD3-209ENST00000473376 SLC25A13Q9UJS0 675 aa13.93□□□□□ -0.18
CHD3-209ENST00000473376 STAP1Q9ULZ2 295 aa13.93□□□□□ -0.18
CHD3-209ENST00000473376 FARP1Q9Y4F1 1045 aaPredicted RBP13.93□□□□□ -0.18
CHD3-209ENST00000473376 DSPP15924 2871 aaKnown RBP13.93□□□□□ -0.18
CHD3-209ENST00000473376 A0A087WV48 116 aa13.92□□□□□ -0.18
CHD3-209ENST00000473376 TBC1D3DA0A087WVF3 549 aa13.92□□□□□ -0.18
CHD3-209ENST00000473376 TBC1D3IA0A087WXS9 549 aa13.92□□□□□ -0.18
CHD3-209ENST00000473376 TBC1D3EA0A087X179 549 aa13.92□□□□□ -0.18
CHD3-209ENST00000473376 TBC1D3KA0A087X1G2 549 aa13.92□□□□□ -0.18
CHD3-209ENST00000473376 TBC1D3FA6NER0 549 aaPredicted RBP13.92□□□□□ -0.18
CHD3-209ENST00000473376 TBC1D3LB9A6J9 549 aa13.92□□□□□ -0.18
CHD3-209ENST00000473376 WNT1P04628 370 aa13.92□□□□□ -0.18
CHD3-209ENST00000473376 ITGAVP06756 1048 aa13.92□□□□□ -0.18
CHD3-209ENST00000473376 TBC1D3HP0C7X1 549 aa13.92□□□□□ -0.18
CHD3-209ENST00000473376 GABRB2P47870 512 aa13.92□□□□□ -0.18
CHD3-209ENST00000473376 PSMD8P48556 350 aa13.92□□□□□ -0.18
CHD3-209ENST00000473376 CXCR3P49682 368 aa13.92□□□□□ -0.18
CHD3-209ENST00000473376 PITX1P78337 314 aaPredicted RBP13.92□□□□□ -0.18
CHD3-209ENST00000473376 TAF5Q15542 800 aa13.92□□□□□ -0.18
CHD3-209ENST00000473376 TBC1D3GQ6DHY5 549 aa13.92□□□□□ -0.18
CHD3-209ENST00000473376 TBC1D3CQ6IPX1 549 aa13.92□□□□□ -0.18
CHD3-209ENST00000473376 ZNF783Q6ZMS7 281 aa13.92□□□□□ -0.18
CHD3-209ENST00000473376 ZSCAN30Q86W11 494 aa13.92□□□□□ -0.18
CHD3-209ENST00000473376 FAM71AQ8IYT1 594 aa13.92□□□□□ -0.18
CHD3-209ENST00000473376 TBC1D3Q8IZP1 549 aaPredicted RBP13.92□□□□□ -0.18
CHD3-209ENST00000473376 SH2D3CQ8N5H7 860 aa13.92□□□□□ -0.18
CHD3-209ENST00000473376 TMIEQ8NEW7 156 aa13.92□□□□□ -0.18
CHD3-209ENST00000473376 TSC1Q92574 1164 aa13.92□□□□□ -0.18
CHD3-209ENST00000473376 RNF34Q969K3 372 aa13.92□□□□□ -0.18
CHD3-209ENST00000473376 CRACR2AQ9BSW2 395 aa13.92□□□□□ -0.18
CHD3-209ENST00000473376 C2orf49Q9BVC5 232 aaPredicted RBP13.92□□□□□ -0.18
CHD3-209ENST00000473376 ACP6Q9NPH0 428 aa13.92□□□□□ -0.18
CHD3-209ENST00000473376 AASDHPPTQ9NRN7 309 aa13.92□□□□□ -0.18
CHD3-209ENST00000473376 HS3ST4Q9Y661 456 aa13.92□□□□□ -0.18
CHD3-209ENST00000473376 WDFY3Q8IZQ1 3526 aa13.92□□□□□ -0.18
CHD3-209ENST00000473376 ZFYVE26Q68DK2 2539 aa13.92□□□□□ -0.18
CHD3-209ENST00000473376 DRGXA6NNA5 263 aa13.91□□□□□ -0.18
CHD3-209ENST00000473376 PRAMEF26H0Y7S4 382 aa13.91□□□□□ -0.18
CHD3-209ENST00000473376 ENC1O14682 589 aa13.91□□□□□ -0.18
CHD3-209ENST00000473376 RIOK3O14730 519 aaKnown RBP13.91□□□□□ -0.18
CHD3-209ENST00000473376 LDOC1O95751 146 aaPredicted RBP13.91□□□□□ -0.18
CHD3-209ENST00000473376 ERCC5P28715 1186 aaPredicted RBP13.91□□□□□ -0.18
CHD3-209ENST00000473376 EPHA8P29322 1005 aaPredicted RBP13.91□□□□□ -0.18
CHD3-209ENST00000473376 CLCN1P35523 988 aa13.91□□□□□ -0.18
CHD3-209ENST00000473376 HNF1BP35680 557 aa13.91□□□□□ -0.18
CHD3-209ENST00000473376 USP8P40818 1118 aa13.91□□□□□ -0.18
CHD3-209ENST00000473376 SLC20A2Q08357 652 aa13.91□□□□□ -0.18
CHD3-209ENST00000473376 SHBQ15464 509 aa13.91□□□□□ -0.18
CHD3-209ENST00000473376 DLG2Q15700 870 aa13.91□□□□□ -0.18
CHD3-209ENST00000473376 MAN2A1Q16706 1144 aa13.91□□□□□ -0.18
CHD3-209ENST00000473376 ARHGAP44Q17R89 818 aa13.91□□□□□ -0.18
CHD3-209ENST00000473376 SETMARQ53H47 684 aaPredicted RBP13.91□□□□□ -0.18
CHD3-209ENST00000473376 SFMBT2Q5VUG0 894 aa13.91□□□□□ -0.18
CHD3-209ENST00000473376 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.91□□□□□ -0.18
CHD3-209ENST00000473376 FAM183BPQ6ZVS7 135 aa13.91□□□□□ -0.18
CHD3-209ENST00000473376 TMEM35BQ8NCS4 154 aa13.91□□□□□ -0.18
CHD3-209ENST00000473376 WDCPQ9H6R7 721 aa13.91□□□□□ -0.18
CHD3-209ENST00000473376 PLXNB3Q9ULL4 1909 aa13.91□□□□□ -0.18
CHD3-209ENST00000473376 IGLV3-10A0A075B6K4 115 aa13.9□□□□□ -0.18
CHD3-209ENST00000473376 TRABD2BA6NFA1 517 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms