RNA–Protein interactions for RNA: ENST00000473334.1

PTP4A1-203, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 3

Gene PTP4A1, Length 638 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-203ENST00000473334 SETD3Q86TU7 594 aaPredicted RBP23.16■■□□□ 1.3
PTP4A1-203ENST00000473334 NAP1L5Q96NT1 182 aaPredicted RBP23.16■■□□□ 1.3
PTP4A1-203ENST00000473334 SGK2Q9HBY8 427 aa23.16■■□□□ 1.3
PTP4A1-203ENST00000473334 CBX8Q9HC52 389 aa23.16■■□□□ 1.3
PTP4A1-203ENST00000473334 FSCN3Q9NQT6 498 aa23.16■■□□□ 1.3
PTP4A1-203ENST00000473334 MPP6Q9NZW5 540 aa23.16■■□□□ 1.3
PTP4A1-203ENST00000473334 LRRC53A6NM62 1247 aa23.15■■□□□ 1.3
PTP4A1-203ENST00000473334 MID1O15344 667 aa23.15■■□□□ 1.3
PTP4A1-203ENST00000473334 SRGAP2O75044 1071 aa23.15■■□□□ 1.3
PTP4A1-203ENST00000473334 SEMA4FO95754 770 aa23.15■■□□□ 1.3
PTP4A1-203ENST00000473334 KCNA4P22459 653 aa23.15■■□□□ 1.3
PTP4A1-203ENST00000473334 RFC1P35251 1148 aaPredicted RBP23.15■■□□□ 1.3
PTP4A1-203ENST00000473334 ATXN3P54252 364 aaPredicted RBP23.15■■□□□ 1.3
PTP4A1-203ENST00000473334 ELAVL3Q14576 367 aaKnown RBP23.15■■□□□ 1.3
PTP4A1-203ENST00000473334 ARL13BQ3SXY8 428 aa23.15■■□□□ 1.3
PTP4A1-203ENST00000473334 RAB6CQ53S08 254 aa23.15■■□□□ 1.3
PTP4A1-203ENST00000473334 ARTNQ5T4W7 220 aa23.15■■□□□ 1.3
PTP4A1-203ENST00000473334 SH3PXD2AQ5TCZ1 1133 aa23.15■■□□□ 1.3
PTP4A1-203ENST00000473334 LRSAM1Q6UWE0 723 aa23.15■■□□□ 1.3
PTP4A1-203ENST00000473334 TFAP2DQ7Z6R9 452 aa23.15■■□□□ 1.3
PTP4A1-203ENST00000473334 MMAAQ8IVH4 418 aaKnown RBP23.15■■□□□ 1.3
PTP4A1-203ENST00000473334 STK40Q8N2I9 435 aa23.15■■□□□ 1.3
PTP4A1-203ENST00000473334 GANCQ8TET4 914 aa23.15■■□□□ 1.3
PTP4A1-203ENST00000473334 FRS2Q8WU20 508 aa23.15■■□□□ 1.3
PTP4A1-203ENST00000473334 FAM129BQ96TA1 746 aa23.15■■□□□ 1.3
PTP4A1-203ENST00000473334 SYT11Q9BT88 431 aa23.15■■□□□ 1.3
PTP4A1-203ENST00000473334 GTPBP2Q9BX10 602 aaKnown RBP23.15■■□□□ 1.3
PTP4A1-203ENST00000473334 RAB6CQ9H0N0 254 aa23.15■■□□□ 1.3
PTP4A1-203ENST00000473334 MIR1-1HGQ9H1L0 117 aa23.15■■□□□ 1.3
PTP4A1-203ENST00000473334 C6orf106Q9H6K1 298 aaPredicted RBP23.15■■□□□ 1.3
PTP4A1-203ENST00000473334 FBXL12Q9NXK8 326 aa23.15■■□□□ 1.3
PTP4A1-203ENST00000473334 A0A1B0GTW7 788 aa23.14■■□□□ 1.29
PTP4A1-203ENST00000473334 SIGLEC16A6NMB1 481 aa23.14■■□□□ 1.29
PTP4A1-203ENST00000473334 ARHGAP33O14559 1287 aa23.14■■□□□ 1.29
PTP4A1-203ENST00000473334 ATP9BO43861 1147 aa23.14■■□□□ 1.29
PTP4A1-203ENST00000473334 SYPP08247 313 aa23.14■■□□□ 1.29
PTP4A1-203ENST00000473334 TNFAIP3P21580 790 aa23.14■■□□□ 1.29
PTP4A1-203ENST00000473334 GPD1P21695 349 aa23.14■■□□□ 1.29
PTP4A1-203ENST00000473334 KRT83P78385 493 aa23.14■■□□□ 1.29
PTP4A1-203ENST00000473334 UAP1L1Q3KQV9 507 aa23.14■■□□□ 1.29
PTP4A1-203ENST00000473334 C6orf118Q5T5N4 469 aa23.14■■□□□ 1.29
PTP4A1-203ENST00000473334 ACAD10Q6JQN1 1059 aa23.14■■□□□ 1.29
PTP4A1-203ENST00000473334 DNAJC24Q6P3W2 148 aa23.14■■□□□ 1.29
PTP4A1-203ENST00000473334 WDR59Q6PJI9 974 aa23.14■■□□□ 1.29
PTP4A1-203ENST00000473334 ZCCHC9Q8N567 271 aaKnown RBP23.14■■□□□ 1.29
PTP4A1-203ENST00000473334 FAM172AQ8WUF8 416 aa23.14■■□□□ 1.29
PTP4A1-203ENST00000473334 CENPIQ92674 756 aaPredicted RBP23.14■■□□□ 1.29
PTP4A1-203ENST00000473334 PSMB7Q99436 277 aa23.14■■□□□ 1.29
PTP4A1-203ENST00000473334 C2orf49Q9BVC5 232 aaPredicted RBP23.14■■□□□ 1.29
PTP4A1-203ENST00000473334 ZYG11BQ9C0D3 744 aa23.14■■□□□ 1.29
PTP4A1-203ENST00000473334 PPARGC1AQ9UBK2 798 aaKnown RBP23.14■■□□□ 1.29
PTP4A1-203ENST00000473334 TCRBV5S1A1TA0A578 114 aa23.13■■□□□ 1.29
PTP4A1-203ENST00000473334 ADH1BP00325 375 aa23.13■■□□□ 1.29
PTP4A1-203ENST00000473334 VAV1P15498 845 aa23.13■■□□□ 1.29
PTP4A1-203ENST00000473334 OR1E1P30953 314 aa23.13■■□□□ 1.29
PTP4A1-203ENST00000473334 SLC8A1P32418 973 aa23.13■■□□□ 1.29
PTP4A1-203ENST00000473334 ADRA1BP35368 520 aa23.13■■□□□ 1.29
PTP4A1-203ENST00000473334 PSMD8P48556 350 aa23.13■■□□□ 1.29
PTP4A1-203ENST00000473334 HDAC4P56524 1084 aa23.13■■□□□ 1.29
PTP4A1-203ENST00000473334 NRG1Q02297 640 aaPredicted RBP23.13■■□□□ 1.29
PTP4A1-203ENST00000473334 NR1I3Q14994 352 aa23.13■■□□□ 1.29
PTP4A1-203ENST00000473334 ASIC2Q16515 512 aa23.13■■□□□ 1.29
PTP4A1-203ENST00000473334 PPP1R2P3Q6NXS1 205 aa23.13■■□□□ 1.29
PTP4A1-203ENST00000473334 LUZP1Q86V48 1076 aa23.13■■□□□ 1.29
PTP4A1-203ENST00000473334 SH2D3CQ8N5H7 860 aa23.13■■□□□ 1.29
PTP4A1-203ENST00000473334 DCAF4L2Q8NA75 395 aa23.13■■□□□ 1.29
PTP4A1-203ENST00000473334 SNX19Q92543 992 aa23.13■■□□□ 1.29
PTP4A1-203ENST00000473334 SERGEFQ9UGK8 458 aa23.13■■□□□ 1.29
PTP4A1-203ENST00000473334 EIF2B4Q9UI10 523 aaKnown RBP23.13■■□□□ 1.29
PTP4A1-203ENST00000473334 ZBTB32Q9Y2Y4 487 aaPredicted RBP23.13■■□□□ 1.29
PTP4A1-203ENST00000473334 SPTBN2O15020 2390 aa23.13■■□□□ 1.29
PTP4A1-203ENST00000473334 CACNA1EQ15878 2313 aa23.13■■□□□ 1.29
PTP4A1-203ENST00000473334 A0A1W2PP55 124 aa23.12■■□□□ 1.29
PTP4A1-203ENST00000473334 ANKRD62A6NC57 917 aa23.12■■□□□ 1.29
PTP4A1-203ENST00000473334 KCNK5O95279 499 aa23.12■■□□□ 1.29
PTP4A1-203ENST00000473334 ADRB1P08588 477 aa23.12■■□□□ 1.29
PTP4A1-203ENST00000473334 DLG2Q15700 870 aa23.12■■□□□ 1.29
PTP4A1-203ENST00000473334 ACCSLQ4AC99 568 aa23.12■■□□□ 1.29
PTP4A1-203ENST00000473334 ZNF783Q6ZMS7 281 aa23.12■■□□□ 1.29
PTP4A1-203ENST00000473334 MCOLN2Q8IZK6 566 aa23.12■■□□□ 1.29
PTP4A1-203ENST00000473334 MINDY1Q8N5J2 469 aa23.12■■□□□ 1.29
PTP4A1-203ENST00000473334 OR8D1Q8WZ84 308 aa23.12■■□□□ 1.29
PTP4A1-203ENST00000473334 OMDQ99983 421 aa23.12■■□□□ 1.29
PTP4A1-203ENST00000473334 EDEM3Q9BZQ6 932 aa23.12■■□□□ 1.29
PTP4A1-203ENST00000473334 TTYH3Q9C0H2 523 aa23.12■■□□□ 1.29
PTP4A1-203ENST00000473334 OSBPL2Q9H1P3 480 aa23.12■■□□□ 1.29
PTP4A1-203ENST00000473334 AIPL1Q9NZN9 384 aa23.12■■□□□ 1.29
PTP4A1-203ENST00000473334 ZNF212Q9UDV6 495 aa23.12■■□□□ 1.29
PTP4A1-203ENST00000473334 OR12D3Q9UGF7 316 aa23.12■■□□□ 1.29
PTP4A1-203ENST00000473334 ADAMTS1Q9UHI8 967 aa23.12■■□□□ 1.29
PTP4A1-203ENST00000473334 VPS51Q9UID3 782 aa23.12■■□□□ 1.29
PTP4A1-203ENST00000473334 FZD4Q9ULV1 537 aa23.12■■□□□ 1.29
PTP4A1-203ENST00000473334 HS3ST2Q9Y278 367 aa23.12■■□□□ 1.29
PTP4A1-203ENST00000473334 NCOR2Q9Y618 2525 aa23.11■■□□□ 1.29
PTP4A1-203ENST00000473334 CNOT1A5YKK6 2376 aaKnown RBP23.11■■□□□ 1.29
PTP4A1-203ENST00000473334 A0A0D9SEW6 157 aa23.11■■□□□ 1.29
PTP4A1-203ENST00000473334 ILVBLA1L0T0 632 aa23.11■■□□□ 1.29
PTP4A1-203ENST00000473334 BCAT2O15382 392 aaPredicted RBP23.11■■□□□ 1.29
PTP4A1-203ENST00000473334 SNAP91O60641 907 aa23.11■■□□□ 1.29
PTP4A1-203ENST00000473334 RNASEH2AO75792 299 aaKnown RBP23.11■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms