RNA–Protein interactions for RNA: ENST00000473212.1

COL18A1-207, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 2,515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-207ENST00000473212 PIM1P11309 404 aaPredicted RBP21.56■■□□□ 1.04
COL18A1-207ENST00000473212 PRDX6P30041 224 aa21.56■■□□□ 1.04
COL18A1-207ENST00000473212 GJA5P36382 358 aa21.56■■□□□ 1.04
COL18A1-207ENST00000473212 FOLH1Q04609 750 aa21.56■■□□□ 1.04
COL18A1-207ENST00000473212 ANKRD20A4Q4UJ75 823 aa21.56■■□□□ 1.04
COL18A1-207ENST00000473212 MAP3K21Q5TCX8 1036 aa21.56■■□□□ 1.04
COL18A1-207ENST00000473212 BEST2Q8NFU1 509 aa21.56■■□□□ 1.04
COL18A1-207ENST00000473212 TMEM40Q8WWA1 233 aa21.56■■□□□ 1.04
COL18A1-207ENST00000473212 KCNK16Q96T55 309 aa21.56■■□□□ 1.04
COL18A1-207ENST00000473212 RBBP8Q99708 897 aa21.56■■□□□ 1.04
COL18A1-207ENST00000473212 ADAMTS10Q9H324 1103 aa21.56■■□□□ 1.04
COL18A1-207ENST00000473212 SSX2IPQ9Y2D8 614 aa21.56■■□□□ 1.04
COL18A1-207ENST00000473212 SHROOM3Q8TF72 1996 aa21.55■■□□□ 1.04
COL18A1-207ENST00000473212 KPNA7A9QM74 516 aa21.55■■□□□ 1.04
COL18A1-207ENST00000473212 AIM2O14862 343 aa21.55■■□□□ 1.04
COL18A1-207ENST00000473212 PABPC4LP0CB38 370 aaKnown RBP21.55■■□□□ 1.04
COL18A1-207ENST00000473212 SERPINB8P50452 374 aa21.55■■□□□ 1.04
COL18A1-207ENST00000473212 IFRD2Q12894 506 aaPredicted RBP21.55■■□□□ 1.04
COL18A1-207ENST00000473212 SPANXN3Q5MJ09 141 aa21.55■■□□□ 1.04
COL18A1-207ENST00000473212 FSTL4Q6MZW2 842 aa21.55■■□□□ 1.04
COL18A1-207ENST00000473212 SATL1Q86VE3 508 aa21.55■■□□□ 1.04
COL18A1-207ENST00000473212 NT5DC4Q86YG4 428 aa21.55■■□□□ 1.04
COL18A1-207ENST00000473212 TDRD5Q8NAT2 981 aaKnown RBP21.55■■□□□ 1.04
COL18A1-207ENST00000473212 UBP1Q9NZI7 540 aa21.55■■□□□ 1.04
COL18A1-207ENST00000473212 G3BP2Q9UN86 482 aaKnown RBP21.55■■□□□ 1.04
COL18A1-207ENST00000473212 ASB14A6NK59 587 aa21.55■■□□□ 1.04
COL18A1-207ENST00000473212 TPH1P17752 444 aa21.55■■□□□ 1.04
COL18A1-207ENST00000473212 ITGA7Q13683 1181 aa21.55■■□□□ 1.04
COL18A1-207ENST00000473212 SLC25A52Q3SY17 297 aa21.55■■□□□ 1.04
COL18A1-207ENST00000473212 SLC27A1Q6PCB7 646 aa21.55■■□□□ 1.04
COL18A1-207ENST00000473212 UNC93AQ86WB7 457 aa21.55■■□□□ 1.04
COL18A1-207ENST00000473212 VCX3AQ9NNX9 186 aa21.55■■□□□ 1.04
COL18A1-207ENST00000473212 DTNAQ9Y4J8 743 aa21.55■■□□□ 1.04
COL18A1-207ENST00000473212 A0A096LPK6 155 aa21.54■■□□□ 1.04
COL18A1-207ENST00000473212 PALM2-AKAP2B1ALY0 433 aaPredicted RBP21.54■■□□□ 1.04
COL18A1-207ENST00000473212 ATP9BO43861 1147 aa21.54■■□□□ 1.04
COL18A1-207ENST00000473212 SPRP35270 261 aaPredicted RBP21.54■■□□□ 1.04
COL18A1-207ENST00000473212 MAGEA12P43365 314 aa21.54■■□□□ 1.04
COL18A1-207ENST00000473212 ALDH1A3P47895 512 aa21.54■■□□□ 1.04
COL18A1-207ENST00000473212 GLUD2P49448 558 aa21.54■■□□□ 1.04
COL18A1-207ENST00000473212 RPS6KA3P51812 740 aa21.54■■□□□ 1.04
COL18A1-207ENST00000473212 CHN2P52757 468 aa21.54■■□□□ 1.04
COL18A1-207ENST00000473212 HSP90AA5PQ58FG0 334 aa21.54■■□□□ 1.04
COL18A1-207ENST00000473212 CERCAMQ5T4B2 595 aa21.54■■□□□ 1.04
COL18A1-207ENST00000473212 UGT2A3Q6UWM9 527 aa21.54■■□□□ 1.04
COL18A1-207ENST00000473212 STRADAQ7RTN6 431 aa21.54■■□□□ 1.04
COL18A1-207ENST00000473212 SDCCAG8Q86SQ7 713 aaPredicted RBP21.54■■□□□ 1.04
COL18A1-207ENST00000473212 MROH8Q9H579 483 aa21.54■■□□□ 1.04
COL18A1-207ENST00000473212 TCF7L2Q9NQB0 619 aa21.54■■□□□ 1.04
COL18A1-207ENST00000473212 SLC4A7Q9Y6M7 1214 aa21.54■■□□□ 1.04
COL18A1-207ENST00000473212 SMIM28A0A1B0GU29 152 aa21.54■■□□□ 1.04
COL18A1-207ENST00000473212 NRP1O14786 923 aa21.54■■□□□ 1.04
COL18A1-207ENST00000473212 SNAI1O95863 264 aaPredicted RBP21.54■■□□□ 1.04
COL18A1-207ENST00000473212 SMPD1P17405 629 aa21.54■■□□□ 1.04
COL18A1-207ENST00000473212 NUDT2P50583 147 aa21.54■■□□□ 1.04
COL18A1-207ENST00000473212 PPP2R5DQ14738 602 aa21.54■■□□□ 1.04
COL18A1-207ENST00000473212 PPM1LQ5SGD2 360 aa21.54■■□□□ 1.04
COL18A1-207ENST00000473212 OGFRL1Q5TC84 451 aaPredicted RBP21.54■■□□□ 1.04
COL18A1-207ENST00000473212 CRYBG2Q8N1P7 616 aa21.54■■□□□ 1.04
COL18A1-207ENST00000473212 NPWQ8N729 165 aa21.54■■□□□ 1.04
COL18A1-207ENST00000473212 LRRC52Q8N7C0 313 aa21.54■■□□□ 1.04
COL18A1-207ENST00000473212 NAT14Q8WUY8 206 aa21.54■■□□□ 1.04
COL18A1-207ENST00000473212 SNX25Q9H3E2 840 aa21.54■■□□□ 1.04
COL18A1-207ENST00000473212 WDR55Q9H6Y2 383 aaPredicted RBP21.54■■□□□ 1.04
COL18A1-207ENST00000473212 KLHL8Q9P2G9 620 aaPredicted RBP21.54■■□□□ 1.04
COL18A1-207ENST00000473212 PIRO00625 290 aa21.53■■□□□ 1.04
COL18A1-207ENST00000473212 NEMP1O14524 444 aa21.53■■□□□ 1.04
COL18A1-207ENST00000473212 CXCL11O14625 94 aa21.53■■□□□ 1.04
COL18A1-207ENST00000473212 OR6B1O95007 311 aa21.53■■□□□ 1.04
COL18A1-207ENST00000473212 LIMK2P53671 638 aa21.53■■□□□ 1.04
COL18A1-207ENST00000473212 ISLR2Q6UXK2 745 aa21.53■■□□□ 1.04
COL18A1-207ENST00000473212 ALKAL1Q6UXT8 129 aa21.53■■□□□ 1.04
COL18A1-207ENST00000473212 ANKRD13AQ8IZ07 590 aa21.53■■□□□ 1.04
COL18A1-207ENST00000473212 HAPLN3Q96S86 360 aa21.53■■□□□ 1.04
COL18A1-207ENST00000473212 FERMT1Q9BQL6 677 aa21.53■■□□□ 1.04
COL18A1-207ENST00000473212 KATNBL1Q9H079 304 aa21.53■■□□□ 1.04
COL18A1-207ENST00000473212 CDKN2AIPQ9NXV6 580 aaPredicted RBP21.53■■□□□ 1.04
COL18A1-207ENST00000473212 KCNH4Q9UQ05 1017 aa21.53■■□□□ 1.04
COL18A1-207ENST00000473212 COMMD3-BMI1R4GMX3 469 aa21.53■■□□□ 1.04
COL18A1-207ENST00000473212 C15orf38-AP3S2A0A0A6YYH1 394 aa21.53■■□□□ 1.04
COL18A1-207ENST00000473212 PEX1O43933 1283 aa21.53■■□□□ 1.04
COL18A1-207ENST00000473212 GPR32O75388 356 aa21.53■■□□□ 1.04
COL18A1-207ENST00000473212 PGM3O95394 542 aa21.53■■□□□ 1.04
COL18A1-207ENST00000473212 CHRNGP07510 517 aa21.53■■□□□ 1.04
COL18A1-207ENST00000473212 SAT1P21673 171 aa21.53■■□□□ 1.04
COL18A1-207ENST00000473212 GLDCP23378 1020 aa21.53■■□□□ 1.04
COL18A1-207ENST00000473212 PDK1Q15118 436 aa21.53■■□□□ 1.04
COL18A1-207ENST00000473212 ZNF792Q3KQV3 632 aa21.53■■□□□ 1.04
COL18A1-207ENST00000473212 DCAF4L1Q3SXM0 396 aa21.53■■□□□ 1.04
COL18A1-207ENST00000473212 PAQR9Q6ZVX9 377 aa21.53■■□□□ 1.04
COL18A1-207ENST00000473212 TMC7Q7Z402 723 aa21.53■■□□□ 1.04
COL18A1-207ENST00000473212 ARPINQ7Z6K5 226 aa21.53■■□□□ 1.04
COL18A1-207ENST00000473212 ARRDC4Q8NCT1 418 aa21.53■■□□□ 1.04
COL18A1-207ENST00000473212 ISL2Q96A47 359 aa21.53■■□□□ 1.04
COL18A1-207ENST00000473212 ADAM28Q9UKQ2 775 aa21.53■■□□□ 1.04
COL18A1-207ENST00000473212 SBF1O95248 1867 aa21.53■■□□□ 1.04
COL18A1-207ENST00000473212 MPSTP25325 297 aa21.52■■□□□ 1.04
COL18A1-207ENST00000473212 PIK3R1P27986 724 aa21.52■■□□□ 1.04
COL18A1-207ENST00000473212 RPL34P49207 117 aaKnown RBP21.52■■□□□ 1.04
COL18A1-207ENST00000473212 R3HDM1Q15032 1099 aaKnown RBP21.52■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms