RNA–Protein interactions for RNA: ENST00000472096.1

CALD1-215, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 651 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-215ENST00000472096 CYP2U1Q7Z449 544 aa15.49■□□□□ 0.07
CALD1-215ENST00000472096 TMEFF1Q8IYR6 380 aa15.49■□□□□ 0.07
CALD1-215ENST00000472096 PRCCQ92733 491 aaPredicted RBP15.49■□□□□ 0.07
CALD1-215ENST00000472096 SYN2Q92777 582 aaPredicted RBP15.49■□□□□ 0.07
CALD1-215ENST00000472096 ALG14Q96F25 216 aa15.49■□□□□ 0.07
CALD1-215ENST00000472096 SIPA1Q96FS4 1042 aa15.49■□□□□ 0.07
CALD1-215ENST00000472096 KRTAP3-3Q9BYR6 98 aa15.49■□□□□ 0.07
CALD1-215ENST00000472096 KRTAP3-2Q9BYR7 98 aa15.49■□□□□ 0.07
CALD1-215ENST00000472096 MTG2Q9H4K7 406 aa15.49■□□□□ 0.07
CALD1-215ENST00000472096 MPP6Q9NZW5 540 aa15.49■□□□□ 0.07
CALD1-215ENST00000472096 SUN2Q9UH99 717 aa15.49■□□□□ 0.07
CALD1-215ENST00000472096 CAPN11Q9UMQ6 739 aa15.49■□□□□ 0.07
CALD1-215ENST00000472096 TP53BP1Q12888 1972 aaPredicted RBP15.49■□□□□ 0.07
CALD1-215ENST00000472096 ANKRD62A6NC57 917 aa15.48■□□□□ 0.07
CALD1-215ENST00000472096 DRGXA6NNA5 263 aa15.48■□□□□ 0.07
CALD1-215ENST00000472096 AP5Z1O43299 807 aa15.48■□□□□ 0.07
CALD1-215ENST00000472096 IGLV3-19P01714 112 aa15.48■□□□□ 0.07
CALD1-215ENST00000472096 RHOCP08134 193 aa15.48■□□□□ 0.07
CALD1-215ENST00000472096 ZNF806P0C7X5 589 aa15.48■□□□□ 0.07
CALD1-215ENST00000472096 ADRA1BP35368 520 aa15.48■□□□□ 0.07
CALD1-215ENST00000472096 PTGER3P43115 390 aa15.48■□□□□ 0.07
CALD1-215ENST00000472096 STK19P49842 368 aaPredicted RBP15.48■□□□□ 0.07
CALD1-215ENST00000472096 ZNF143P52747 638 aaPredicted RBP15.48■□□□□ 0.07
CALD1-215ENST00000472096 NRG1Q02297 640 aaPredicted RBP15.48■□□□□ 0.07
CALD1-215ENST00000472096 SULT2A1Q06520 285 aa15.48■□□□□ 0.07
CALD1-215ENST00000472096 ARID5BQ14865 1188 aa15.48■□□□□ 0.07
CALD1-215ENST00000472096 HNRNPA1L2Q32P51 320 aaKnown RBP15.48■□□□□ 0.07
CALD1-215ENST00000472096 ARL13BQ3SXY8 428 aa15.48■□□□□ 0.07
CALD1-215ENST00000472096 SPDYCQ5MJ68 293 aa15.48■□□□□ 0.07
CALD1-215ENST00000472096 MANEALQ5VSG8 457 aa15.48■□□□□ 0.07
CALD1-215ENST00000472096 RNF219Q5W0B1 726 aaPredicted RBP15.48■□□□□ 0.07
CALD1-215ENST00000472096 PLEKHA7Q6IQ23 1121 aa15.48■□□□□ 0.07
CALD1-215ENST00000472096 DCUN1D2Q6PH85 259 aa15.48■□□□□ 0.07
CALD1-215ENST00000472096 ARMCX6Q7L4S7 300 aa15.48■□□□□ 0.07
CALD1-215ENST00000472096 TFAP2DQ7Z6R9 452 aa15.48■□□□□ 0.07
CALD1-215ENST00000472096 LAPTM4BQ86VI4 370 aa15.48■□□□□ 0.07
CALD1-215ENST00000472096 DNAAF5Q86Y56 855 aa15.48■□□□□ 0.07
CALD1-215ENST00000472096 CCDC185Q8N715 623 aa15.48■□□□□ 0.07
CALD1-215ENST00000472096 RNF214Q8ND24 703 aa15.48■□□□□ 0.07
CALD1-215ENST00000472096 CPLX3Q8WVH0 158 aa15.48■□□□□ 0.07
CALD1-215ENST00000472096 NTAN1Q96AB6 310 aa15.48■□□□□ 0.07
CALD1-215ENST00000472096 FEM1AQ9BSK4 669 aa15.48■□□□□ 0.07
CALD1-215ENST00000472096 SMOC1Q9H4F8 434 aa15.48■□□□□ 0.07
CALD1-215ENST00000472096 ZNF212Q9UDV6 495 aa15.48■□□□□ 0.07
CALD1-215ENST00000472096 VPS28Q9UK41 221 aa15.48■□□□□ 0.07
CALD1-215ENST00000472096 OR51B4Q9Y5P0 310 aa15.48■□□□□ 0.07
CALD1-215ENST00000472096 DCHS1Q96JQ0 3298 aa15.48■□□□□ 0.07
CALD1-215ENST00000472096 PCDH15Q96QU1 1955 aa15.47■□□□□ 0.07
CALD1-215ENST00000472096 TTC34A8MYJ7 566 aa15.47■□□□□ 0.07
CALD1-215ENST00000472096 CBFA2T2O43439 604 aa15.47■□□□□ 0.07
CALD1-215ENST00000472096 FOXD2O60548 495 aaPredicted RBP15.47■□□□□ 0.07
CALD1-215ENST00000472096 SRGAP2O75044 1071 aa15.47■□□□□ 0.07
CALD1-215ENST00000472096 SIN3BO75182 1162 aa15.47■□□□□ 0.07
CALD1-215ENST00000472096 RTN2O75298 545 aa15.47■□□□□ 0.07
CALD1-215ENST00000472096 ACADMP11310 421 aa15.47■□□□□ 0.07
CALD1-215ENST00000472096 CD6P30203 668 aa15.47■□□□□ 0.07
CALD1-215ENST00000472096 TPMTP51580 245 aa15.47■□□□□ 0.07
CALD1-215ENST00000472096 OGDHQ02218 1023 aa15.47■□□□□ 0.07
CALD1-215ENST00000472096 SCAPQ12770 1279 aa15.47■□□□□ 0.07
CALD1-215ENST00000472096 MAMLD1Q13495 774 aa15.47■□□□□ 0.07
CALD1-215ENST00000472096 SF3A2Q15428 464 aaKnown RBP15.47■□□□□ 0.07
CALD1-215ENST00000472096 LYSMD4Q5XG99 296 aa15.47■□□□□ 0.07
CALD1-215ENST00000472096 SETD3Q86TU7 594 aaPredicted RBP15.47■□□□□ 0.07
CALD1-215ENST00000472096 ZNF653Q96CK0 615 aa15.47■□□□□ 0.07
CALD1-215ENST00000472096 RPL10LQ96L21 214 aaKnown RBP15.47■□□□□ 0.07
CALD1-215ENST00000472096 PPP1R9BQ96SB3 815 aa15.47■□□□□ 0.07
CALD1-215ENST00000472096 PSMB7Q99436 277 aa15.47■□□□□ 0.07
CALD1-215ENST00000472096 CNPY3Q9BT09 278 aa15.47■□□□□ 0.07
CALD1-215ENST00000472096 ZYG11BQ9C0D3 744 aa15.47■□□□□ 0.07
CALD1-215ENST00000472096 MUC3BQ9H195 1237 aa15.47■□□□□ 0.07
CALD1-215ENST00000472096 ITM2CQ9NQX7 267 aa15.47■□□□□ 0.07
CALD1-215ENST00000472096 VPS45Q9NRW7 570 aa15.47■□□□□ 0.07
CALD1-215ENST00000472096 PARVAQ9NVD7 372 aa15.47■□□□□ 0.07
CALD1-215ENST00000472096 PPARGC1AQ9UBK2 798 aaKnown RBP15.47■□□□□ 0.07
CALD1-215ENST00000472096 SLCO3A1Q9UIG8 710 aa15.47■□□□□ 0.07
CALD1-215ENST00000472096 NEU3Q9UQ49 428 aa15.47■□□□□ 0.07
CALD1-215ENST00000472096 LUC7L2Q9Y383 392 aaKnown RBP15.47■□□□□ 0.07
CALD1-215ENST00000472096 BZW2Q9Y6E2 419 aaKnown RBP15.47■□□□□ 0.07
CALD1-215ENST00000472096 ATXN2Q99700 1313 aaKnown RBP15.46■□□□□ 0.07
CALD1-215ENST00000472096 EDDM13A0A1B0GTR0 161 aa15.46■□□□□ 0.07
CALD1-215ENST00000472096 PRR5-ARHGAP8B1AHC4 643 aa15.46■□□□□ 0.07
CALD1-215ENST00000472096 NDUFS2O75306 463 aa15.46■□□□□ 0.07
CALD1-215ENST00000472096 FTLP02792 175 aaPredicted RBP15.46■□□□□ 0.07
CALD1-215ENST00000472096 SERPING1P05155 500 aa15.46■□□□□ 0.07
CALD1-215ENST00000472096 PLEKP08567 350 aaPredicted RBP15.46■□□□□ 0.07
CALD1-215ENST00000472096 RPS14P62263 151 aaKnown RBP15.46■□□□□ 0.07
CALD1-215ENST00000472096 ARHGAP8P85298 464 aa15.46■□□□□ 0.07
CALD1-215ENST00000472096 C6orf118Q5T5N4 469 aa15.46■□□□□ 0.07
CALD1-215ENST00000472096 C9orf64Q5T6V5 341 aa15.46■□□□□ 0.07
CALD1-215ENST00000472096 PEAR1Q5VY43 1037 aaPredicted RBP15.46■□□□□ 0.07
CALD1-215ENST00000472096 ZNF776Q68DI1 518 aaPredicted RBP15.46■□□□□ 0.07
CALD1-215ENST00000472096 TCEAL6Q6IPX3 200 aa15.46■□□□□ 0.07
CALD1-215ENST00000472096 TMC6Q7Z403 805 aa15.46■□□□□ 0.07
CALD1-215ENST00000472096 DEFB119Q8N690 84 aa15.46■□□□□ 0.07
CALD1-215ENST00000472096 TCEAL3Q969E4 200 aa15.46■□□□□ 0.07
CALD1-215ENST00000472096 RMDN1Q96DB5 314 aa15.46■□□□□ 0.07
CALD1-215ENST00000472096 OSBPL2Q9H1P3 480 aa15.46■□□□□ 0.07
CALD1-215ENST00000472096 RSPH9Q9H1X1 276 aaPredicted RBP15.46■□□□□ 0.07
CALD1-215ENST00000472096 WSB2Q9NYS7 404 aaPredicted RBP15.46■□□□□ 0.07
CALD1-215ENST00000472096 CNOT8Q9UFF9 292 aaKnown RBP15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms