RNA–Protein interactions for RNA: ENST00000471322.2

HSPG2-208, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 1,602 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-208ENST00000471322 PRKD1Q15139 912 aaPredicted RBP17.94■□□□□ 0.46
HSPG2-208ENST00000471322 B4GALNT4Q76KP1 1039 aa17.94■□□□□ 0.46
HSPG2-208ENST00000471322 ARFGAP2Q8N6H7 521 aa17.94■□□□□ 0.46
HSPG2-208ENST00000471322 FGF14Q92915 247 aa17.94■□□□□ 0.46
HSPG2-208ENST00000471322 SERPINB12Q96P63 405 aa17.94■□□□□ 0.46
HSPG2-208ENST00000471322 IL21Q9HBE4 155 aa17.94■□□□□ 0.46
HSPG2-208ENST00000471322 DNAJC17Q9NVM6 304 aaKnown RBP17.94■□□□□ 0.46
HSPG2-208ENST00000471322 SFMBT1Q9UHJ3 866 aa17.94■□□□□ 0.46
HSPG2-208ENST00000471322 SLC12A6Q9UHW9 1150 aa17.94■□□□□ 0.46
HSPG2-208ENST00000471322 PATJQ8NI35 1801 aa17.94■□□□□ 0.46
HSPG2-208ENST00000471322 A0A087WUV0 522 aaPredicted RBP17.93■□□□□ 0.46
HSPG2-208ENST00000471322 A0A0A0MRY4 1105 aa17.93■□□□□ 0.46
HSPG2-208ENST00000471322 KCNU1A8MYU2 1149 aa17.93■□□□□ 0.46
HSPG2-208ENST00000471322 E7ESA3 106 aa17.93■□□□□ 0.46
HSPG2-208ENST00000471322 FGF10O15520 208 aaPredicted RBP17.93■□□□□ 0.46
HSPG2-208ENST00000471322 OPHN1O60890 802 aa17.93■□□□□ 0.46
HSPG2-208ENST00000471322 LRIG2O94898 1065 aa17.93■□□□□ 0.46
HSPG2-208ENST00000471322 CSH1P0DML2 217 aa17.93■□□□□ 0.46
HSPG2-208ENST00000471322 CSH2P0DML3 217 aa17.93■□□□□ 0.46
HSPG2-208ENST00000471322 TSHRP16473 764 aa17.93■□□□□ 0.46
HSPG2-208ENST00000471322 FDFT1P37268 417 aa17.93■□□□□ 0.46
HSPG2-208ENST00000471322 PGFP49763 221 aa17.93■□□□□ 0.46
HSPG2-208ENST00000471322 KPNA1P52294 538 aaPredicted RBP17.93■□□□□ 0.46
HSPG2-208ENST00000471322 GYS2P54840 703 aa17.93■□□□□ 0.46
HSPG2-208ENST00000471322 TAF10Q12962 218 aa17.93■□□□□ 0.46
HSPG2-208ENST00000471322 PDIA2Q13087 525 aaKnown RBP17.93■□□□□ 0.46
HSPG2-208ENST00000471322 KCNJ11Q14654 390 aa17.93■□□□□ 0.46
HSPG2-208ENST00000471322 ANKRD22Q5VYY1 191 aa17.93■□□□□ 0.46
HSPG2-208ENST00000471322 KCTD16Q68DU8 428 aa17.93■□□□□ 0.46
HSPG2-208ENST00000471322 PARM1Q6UWI2 310 aa17.93■□□□□ 0.46
HSPG2-208ENST00000471322 ARHGEF18Q6ZSZ5 1173 aa17.93■□□□□ 0.46
HSPG2-208ENST00000471322 TADA2BQ86TJ2 420 aa17.93■□□□□ 0.46
HSPG2-208ENST00000471322 PLCD3Q8N3E9 789 aa17.93■□□□□ 0.46
HSPG2-208ENST00000471322 ZNF276Q8N554 614 aa17.93■□□□□ 0.46
HSPG2-208ENST00000471322 LZTR1Q8N653 840 aa17.93■□□□□ 0.46
HSPG2-208ENST00000471322 SPATA13Q96N96 652 aa17.93■□□□□ 0.46
HSPG2-208ENST00000471322 RPP25Q9BUL9 199 aaKnown RBP17.93■□□□□ 0.46
HSPG2-208ENST00000471322 TTLL2Q9BWV7 592 aa17.93■□□□□ 0.46
HSPG2-208ENST00000471322 CATSPERBQ9H7T0 1116 aa17.93■□□□□ 0.46
HSPG2-208ENST00000471322 KCNK12Q9HB15 430 aa17.93■□□□□ 0.46
HSPG2-208ENST00000471322 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.93■□□□□ 0.46
HSPG2-208ENST00000471322 OSER1Q9NX31 292 aa17.93■□□□□ 0.46
HSPG2-208ENST00000471322 BCCIPQ9P287 314 aaKnown RBP eCLIP17.93■□□□□ 0.46
HSPG2-208ENST00000471322 RGS16O15492 202 aaPredicted RBP17.92■□□□□ 0.46
HSPG2-208ENST00000471322 PAGE1O75459 146 aa17.92■□□□□ 0.46
HSPG2-208ENST00000471322 TBX4P57082 545 aa17.92■□□□□ 0.46
HSPG2-208ENST00000471322 COG7P83436 770 aa17.92■□□□□ 0.46
HSPG2-208ENST00000471322 ZNF33AQ06730 810 aa17.92■□□□□ 0.46
HSPG2-208ENST00000471322 AP1B1Q10567 949 aa17.92■□□□□ 0.46
HSPG2-208ENST00000471322 TMEM150AQ86TG1 271 aa17.92■□□□□ 0.46
HSPG2-208ENST00000471322 CCNYQ8ND76 341 aa17.92■□□□□ 0.46
HSPG2-208ENST00000471322 MCUQ8NE86 351 aa17.92■□□□□ 0.46
HSPG2-208ENST00000471322 PDZD8Q8NEN9 1154 aa17.92■□□□□ 0.46
HSPG2-208ENST00000471322 CCDC110Q8TBZ0 833 aa17.92■□□□□ 0.46
HSPG2-208ENST00000471322 OVCA2Q8WZ82 227 aa17.92■□□□□ 0.46
HSPG2-208ENST00000471322 SLC39A13Q96H72 371 aa17.92■□□□□ 0.46
HSPG2-208ENST00000471322 C9orf72Q96LT7 481 aa17.92■□□□□ 0.46
HSPG2-208ENST00000471322 PPCSQ9HAB8 311 aa17.92■□□□□ 0.46
HSPG2-208ENST00000471322 DONSONQ9NYP3 566 aa17.92■□□□□ 0.46
HSPG2-208ENST00000471322 EPS15L1Q9UBC2 864 aa17.92■□□□□ 0.46
HSPG2-208ENST00000471322 MFHAS1Q9Y4C4 1052 aa17.92■□□□□ 0.46
HSPG2-208ENST00000471322 AGTP01019 485 aa17.91■□□□□ 0.46
HSPG2-208ENST00000471322 APOEP02649 317 aa17.91■□□□□ 0.46
HSPG2-208ENST00000471322 ZDHHC11BP0C7U3 371 aa17.91■□□□□ 0.46
HSPG2-208ENST00000471322 NR1D1P20393 614 aa17.91■□□□□ 0.46
HSPG2-208ENST00000471322 HOXC13P31276 330 aa17.91■□□□□ 0.46
HSPG2-208ENST00000471322 SARNPP82979 210 aaKnown RBP17.91■□□□□ 0.46
HSPG2-208ENST00000471322 CDK16Q00536 496 aa17.91■□□□□ 0.46
HSPG2-208ENST00000471322 TRIP4Q15650 581 aaPredicted RBP17.91■□□□□ 0.46
HSPG2-208ENST00000471322 GPR158Q5T848 1215 aa17.91■□□□□ 0.46
HSPG2-208ENST00000471322 KDM7AQ6ZMT4 941 aa17.91■□□□□ 0.46
HSPG2-208ENST00000471322 ZBED8Q8IZ13 594 aa17.91■□□□□ 0.46
HSPG2-208ENST00000471322 LEMD2Q8NC56 503 aa17.91■□□□□ 0.46
HSPG2-208ENST00000471322 PYROXD1Q8WU10 500 aa17.91■□□□□ 0.46
HSPG2-208ENST00000471322 TBC1D31Q96DN5 1066 aa17.91■□□□□ 0.46
HSPG2-208ENST00000471322 P2RY11Q96G91 374 aa17.91■□□□□ 0.46
HSPG2-208ENST00000471322 FCRL2Q96LA5 508 aaPredicted RBP17.91■□□□□ 0.46
HSPG2-208ENST00000471322 LGMNQ99538 433 aa17.91■□□□□ 0.46
HSPG2-208ENST00000471322 KXD1Q9BQD3 176 aa17.91■□□□□ 0.46
HSPG2-208ENST00000471322 SIK2Q9H0K1 926 aa17.91■□□□□ 0.46
HSPG2-208ENST00000471322 ETNK1Q9HBU6 452 aa17.91■□□□□ 0.46
HSPG2-208ENST00000471322 NUMBLQ9Y6R0 609 aa17.91■□□□□ 0.46
HSPG2-208ENST00000471322 TLDC2A0PJX2 215 aa17.9■□□□□ 0.46
HSPG2-208ENST00000471322 GOLGA8MH3BSY2 632 aa17.9■□□□□ 0.46
HSPG2-208ENST00000471322 MSI1O43347 362 aaKnown RBP17.9■□□□□ 0.46
HSPG2-208ENST00000471322 TMEM63AO94886 807 aa17.9■□□□□ 0.46
HSPG2-208ENST00000471322 F11P03951 625 aa17.9■□□□□ 0.46
HSPG2-208ENST00000471322 TPSB2P20231 275 aa17.9■□□□□ 0.46
HSPG2-208ENST00000471322 ATP5DP30049 168 aa17.9■□□□□ 0.46
HSPG2-208ENST00000471322 PHBP35232 272 aa17.9■□□□□ 0.46
HSPG2-208ENST00000471322 NRLP54845 237 aa17.9■□□□□ 0.46
HSPG2-208ENST00000471322 MLLT6P55198 1093 aaPredicted RBP17.9■□□□□ 0.46
HSPG2-208ENST00000471322 SKOR1P84550 965 aa17.9■□□□□ 0.46
HSPG2-208ENST00000471322 PPIDQ08752 370 aaKnown RBP17.9■□□□□ 0.46
HSPG2-208ENST00000471322 GALNT2Q10471 571 aa17.9■□□□□ 0.46
HSPG2-208ENST00000471322 TPSAB1Q15661 275 aa17.9■□□□□ 0.46
HSPG2-208ENST00000471322 FAM78AQ5JUQ0 283 aa17.9■□□□□ 0.46
HSPG2-208ENST00000471322 ANKRD20A2Q5SQ80 823 aa17.9■□□□□ 0.46
HSPG2-208ENST00000471322 ANKRD20A1Q5TYW2 823 aa17.9■□□□□ 0.46
HSPG2-208ENST00000471322 ANKRD20A3Q5VUR7 823 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms