RNA–Protein interactions for RNA: ENST00000471260.1

HMGN1-211, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 615 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-211ENST00000471260 VPS16Q9H269 839 aa13.89□□□□□ -0.19
HMGN1-211ENST00000471260 PIGVQ9NUD9 493 aa13.89□□□□□ -0.19
HMGN1-211ENST00000471260 FBXL12Q9NXK8 326 aa13.89□□□□□ -0.19
HMGN1-211ENST00000471260 VANGL2Q9ULK5 521 aa13.89□□□□□ -0.19
HMGN1-211ENST00000471260 TBC1D30Q9Y2I9 924 aa13.89□□□□□ -0.19
HMGN1-211ENST00000471260 ADAMTS9Q9P2N4 1935 aa13.89□□□□□ -0.19
HMGN1-211ENST00000471260 ACACBO00763 2458 aa13.89□□□□□ -0.19
HMGN1-211ENST00000471260 TRIM16O95361 564 aa13.88□□□□□ -0.19
HMGN1-211ENST00000471260 MMEP08473 750 aa13.88□□□□□ -0.19
HMGN1-211ENST00000471260 C5AR1P21730 350 aa13.88□□□□□ -0.19
HMGN1-211ENST00000471260 CD27P26842 260 aa13.88□□□□□ -0.19
HMGN1-211ENST00000471260 MZF1P28698 734 aaPredicted RBP13.88□□□□□ -0.19
HMGN1-211ENST00000471260 SLC8A1P32418 973 aa13.88□□□□□ -0.19
HMGN1-211ENST00000471260 GRIA4P48058 902 aa13.88□□□□□ -0.19
HMGN1-211ENST00000471260 SULT1E1P49888 294 aa13.88□□□□□ -0.19
HMGN1-211ENST00000471260 NOMO3P69849 1222 aa13.88□□□□□ -0.19
HMGN1-211ENST00000471260 MYL5Q02045 173 aa13.88□□□□□ -0.19
HMGN1-211ENST00000471260 DEUP1Q05D60 604 aa13.88□□□□□ -0.19
HMGN1-211ENST00000471260 OTUD1Q5VV17 481 aaPredicted RBP13.88□□□□□ -0.19
HMGN1-211ENST00000471260 TAF3Q5VWG9 929 aa13.88□□□□□ -0.19
HMGN1-211ENST00000471260 LRRC31Q6UY01 552 aa13.88□□□□□ -0.19
HMGN1-211ENST00000471260 TRIM72Q6ZMU5 477 aa13.88□□□□□ -0.19
HMGN1-211ENST00000471260 BNIPLQ7Z465 357 aa13.88□□□□□ -0.19
HMGN1-211ENST00000471260 DSG4Q86SJ6 1040 aa13.88□□□□□ -0.19
HMGN1-211ENST00000471260 SETD3Q86TU7 594 aaPredicted RBP13.88□□□□□ -0.19
HMGN1-211ENST00000471260 CCDC112Q8NEF3 446 aa13.88□□□□□ -0.19
HMGN1-211ENST00000471260 GANCQ8TET4 914 aa13.88□□□□□ -0.19
HMGN1-211ENST00000471260 FRS2Q8WU20 508 aa13.88□□□□□ -0.19
HMGN1-211ENST00000471260 ALG14Q96F25 216 aa13.88□□□□□ -0.19
HMGN1-211ENST00000471260 RPL10LQ96L21 214 aaKnown RBP13.88□□□□□ -0.19
HMGN1-211ENST00000471260 SPAG5Q96R06 1193 aa13.88□□□□□ -0.19
HMGN1-211ENST00000471260 HAPLN3Q96S86 360 aa13.88□□□□□ -0.19
HMGN1-211ENST00000471260 OMDQ99983 421 aa13.88□□□□□ -0.19
HMGN1-211ENST00000471260 MTG2Q9H4K7 406 aa13.88□□□□□ -0.19
HMGN1-211ENST00000471260 FANCLQ9NW38 375 aa13.88□□□□□ -0.19
HMGN1-211ENST00000471260 SLC25A13Q9UJS0 675 aa13.88□□□□□ -0.19
HMGN1-211ENST00000471260 TMEM59LQ9UK28 342 aa13.88□□□□□ -0.19
HMGN1-211ENST00000471260 OR51B4Q9Y5P0 310 aa13.88□□□□□ -0.19
HMGN1-211ENST00000471260 NUMA1Q14980 2115 aa13.88□□□□□ -0.19
HMGN1-211ENST00000471260 A0A1W2PP55 124 aa13.87□□□□□ -0.19
HMGN1-211ENST00000471260 LRRC72A6NJI9 287 aa13.87□□□□□ -0.19
HMGN1-211ENST00000471260 DRGXA6NNA5 263 aa13.87□□□□□ -0.19
HMGN1-211ENST00000471260 MID1O15344 667 aa13.87□□□□□ -0.19
HMGN1-211ENST00000471260 ATP9BO43861 1147 aa13.87□□□□□ -0.19
HMGN1-211ENST00000471260 CYP1A1P04798 512 aaPredicted RBP13.87□□□□□ -0.19
HMGN1-211ENST00000471260 GOT1P17174 413 aa13.87□□□□□ -0.19
HMGN1-211ENST00000471260 SOX5P35711 763 aa13.87□□□□□ -0.19
HMGN1-211ENST00000471260 STAT1P42224 750 aa13.87□□□□□ -0.19
HMGN1-211ENST00000471260 GALCP54803 685 aa13.87□□□□□ -0.19
HMGN1-211ENST00000471260 JAM2P57087 298 aa13.87□□□□□ -0.19
HMGN1-211ENST00000471260 POLR2FP61218 127 aaKnown RBP13.87□□□□□ -0.19
HMGN1-211ENST00000471260 KRT83P78385 493 aa13.87□□□□□ -0.19
HMGN1-211ENST00000471260 CDR2Q01850 454 aa13.87□□□□□ -0.19
HMGN1-211ENST00000471260 KIAA0895LQ68EN5 471 aa13.87□□□□□ -0.19
HMGN1-211ENST00000471260 CIR1Q86X95 450 aaPredicted RBP13.87□□□□□ -0.19
HMGN1-211ENST00000471260 MMAAQ8IVH4 418 aaKnown RBP13.87□□□□□ -0.19
HMGN1-211ENST00000471260 OR2T34Q8NGX1 318 aa13.87□□□□□ -0.19
HMGN1-211ENST00000471260 CPA5Q8WXQ8 436 aa13.87□□□□□ -0.19
HMGN1-211ENST00000471260 SNX19Q92543 992 aa13.87□□□□□ -0.19
HMGN1-211ENST00000471260 SKA1Q96BD8 255 aa13.87□□□□□ -0.19
HMGN1-211ENST00000471260 TBCBQ99426 244 aa13.87□□□□□ -0.19
HMGN1-211ENST00000471260 SIK2Q9H0K1 926 aa13.87□□□□□ -0.19
HMGN1-211ENST00000471260 NEUROG2Q9H2A3 272 aa13.87□□□□□ -0.19
HMGN1-211ENST00000471260 KDM4CQ9H3R0 1056 aa13.87□□□□□ -0.19
HMGN1-211ENST00000471260 RETREG1Q9H6L5 497 aa13.87□□□□□ -0.19
HMGN1-211ENST00000471260 GAREM1Q9H706 876 aa13.87□□□□□ -0.19
HMGN1-211ENST00000471260 TM9SF3Q9HD45 589 aa13.87□□□□□ -0.19
HMGN1-211ENST00000471260 FAM207AQ9NSI2 230 aaPredicted RBP13.87□□□□□ -0.19
HMGN1-211ENST00000471260 LIMA1Q9UHB6 759 aaKnown RBP13.87□□□□□ -0.19
HMGN1-211ENST00000471260 WASF3Q9UPY6 502 aa13.87□□□□□ -0.19
HMGN1-211ENST00000471260 SIK3Q9Y2K2 1263 aa13.87□□□□□ -0.19
HMGN1-211ENST00000471260 PCDHGB2Q9Y5G2 931 aa13.87□□□□□ -0.19
HMGN1-211ENST00000471260 IGLV3-10A0A075B6K4 115 aa13.86□□□□□ -0.19
HMGN1-211ENST00000471260 C10orf142B7Z368 130 aa13.86□□□□□ -0.19
HMGN1-211ENST00000471260 ALOX15BO15296 676 aa13.86□□□□□ -0.19
HMGN1-211ENST00000471260 SLC7A4O43246 635 aa13.86□□□□□ -0.19
HMGN1-211ENST00000471260 DFNA5O60443 496 aa13.86□□□□□ -0.19
HMGN1-211ENST00000471260 GFPT2O94808 682 aa13.86□□□□□ -0.19
HMGN1-211ENST00000471260 ENDOD1O94919 500 aa13.86□□□□□ -0.19
HMGN1-211ENST00000471260 FSBPO95073 299 aa13.86□□□□□ -0.19
HMGN1-211ENST00000471260 TFE3P19532 575 aaPredicted RBP13.86□□□□□ -0.19
HMGN1-211ENST00000471260 MMP8P22894 467 aa13.86□□□□□ -0.19
HMGN1-211ENST00000471260 FLT3P36888 993 aa13.86□□□□□ -0.19
HMGN1-211ENST00000471260 STK19P49842 368 aaPredicted RBP13.86□□□□□ -0.19
HMGN1-211ENST00000471260 COPB1P53618 953 aaKnown RBP13.86□□□□□ -0.19
HMGN1-211ENST00000471260 RACK1P63244 317 aaKnown RBP13.86□□□□□ -0.19
HMGN1-211ENST00000471260 SIM1P81133 766 aaPredicted RBP13.86□□□□□ -0.19
HMGN1-211ENST00000471260 CCZ1BP86790 482 aa13.86□□□□□ -0.19
HMGN1-211ENST00000471260 CCZ1P86791 482 aaPredicted RBP13.86□□□□□ -0.19
HMGN1-211ENST00000471260 CENPCQ03188 943 aa13.86□□□□□ -0.19
HMGN1-211ENST00000471260 SUZ12Q15022 739 aaKnown RBP13.86□□□□□ -0.19
HMGN1-211ENST00000471260 FAM46CQ5VWP2 391 aa13.86□□□□□ -0.19
HMGN1-211ENST00000471260 NAA35Q5VZE5 725 aa13.86□□□□□ -0.19
HMGN1-211ENST00000471260 DBX2Q6ZNG2 339 aa13.86□□□□□ -0.19
HMGN1-211ENST00000471260 C14orf80Q86SX3 495 aa13.86□□□□□ -0.19
HMGN1-211ENST00000471260 ZNF683Q8IZ20 524 aa13.86□□□□□ -0.19
HMGN1-211ENST00000471260 STK40Q8N2I9 435 aa13.86□□□□□ -0.19
HMGN1-211ENST00000471260 NEK11Q8NG66 645 aa13.86□□□□□ -0.19
HMGN1-211ENST00000471260 OR2I1PQ8NGU4 316 aa13.86□□□□□ -0.19
HMGN1-211ENST00000471260 FAM131CQ96AQ9 280 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms