RNA–Protein interactions for RNA: ENST00000471193.1

FN1-217, Transcript of fibronectin 1, humanhuman

TSL 3

Gene FN1, Length 496 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-217ENST00000471193 CCDC33Q8N5R6 958 aa11.9□□□□□ -0.5
FN1-217ENST00000471193 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.9□□□□□ -0.5
FN1-217ENST00000471193 CEP112Q8N8E3 955 aa11.9□□□□□ -0.5
FN1-217ENST00000471193 MNS1Q8NEH6 495 aa11.9□□□□□ -0.5
FN1-217ENST00000471193 OR7D4Q8NG98 312 aa11.9□□□□□ -0.5
FN1-217ENST00000471193 DNASE1L2Q92874 299 aa11.9□□□□□ -0.5
FN1-217ENST00000471193 CHFRQ96EP1 664 aa11.9□□□□□ -0.5
FN1-217ENST00000471193 ALG14Q96F25 216 aa11.9□□□□□ -0.5
FN1-217ENST00000471193 XPO6Q96QU8 1125 aaKnown RBP11.9□□□□□ -0.5
FN1-217ENST00000471193 CARD6Q9BX69 1037 aa11.9□□□□□ -0.5
FN1-217ENST00000471193 BRD8Q9H0E9 1235 aa11.9□□□□□ -0.5
FN1-217ENST00000471193 TRPV5Q9NQA5 729 aa11.9□□□□□ -0.5
FN1-217ENST00000471193 GTSE1Q9NYZ3 720 aa11.9□□□□□ -0.5
FN1-217ENST00000471193 NYNRINQ9P2P1 1898 aaKnown RBP11.9□□□□□ -0.5
FN1-217ENST00000471193 DNPEPQ9ULA0 475 aa11.9□□□□□ -0.5
FN1-217ENST00000471193 OR51B4Q9Y5P0 310 aa11.9□□□□□ -0.5
FN1-217ENST00000471193 CHD5Q8TDI0 1954 aa11.89□□□□□ -0.51
FN1-217ENST00000471193 CTAGE15A4D2H0 777 aa11.89□□□□□ -0.51
FN1-217ENST00000471193 CTAGE8P0CG41 777 aa11.89□□□□□ -0.51
FN1-217ENST00000471193 RBP3P10745 1247 aa11.89□□□□□ -0.51
FN1-217ENST00000471193 VAV1P15498 845 aa11.89□□□□□ -0.51
FN1-217ENST00000471193 MZF1P28698 734 aaPredicted RBP11.89□□□□□ -0.51
FN1-217ENST00000471193 HLA-FP30511 346 aa11.89□□□□□ -0.51
FN1-217ENST00000471193 CHRNA3P32297 505 aa11.89□□□□□ -0.51
FN1-217ENST00000471193 CD70P32970 193 aa11.89□□□□□ -0.51
FN1-217ENST00000471193 GJA4P35212 333 aa11.89□□□□□ -0.51
FN1-217ENST00000471193 ACVRL1P37023 503 aa11.89□□□□□ -0.51
FN1-217ENST00000471193 COILP38432 576 aaPredicted RBP11.89□□□□□ -0.51
FN1-217ENST00000471193 OPRD1P41143 372 aa11.89□□□□□ -0.51
FN1-217ENST00000471193 EIF2DP41214 584 aaKnown RBP11.89□□□□□ -0.51
FN1-217ENST00000471193 PAPOLAP51003 745 aaKnown RBP11.89□□□□□ -0.51
FN1-217ENST00000471193 ZNF33AQ06730 810 aa11.89□□□□□ -0.51
FN1-217ENST00000471193 SERINC3Q13530 473 aa11.89□□□□□ -0.51
FN1-217ENST00000471193 SNX1Q13596 522 aa11.89□□□□□ -0.51
FN1-217ENST00000471193 SLC12A1Q13621 1099 aa11.89□□□□□ -0.51
FN1-217ENST00000471193 BYSLQ13895 437 aaKnown RBP11.89□□□□□ -0.51
FN1-217ENST00000471193 PLEKHG6Q3KR16 790 aa11.89□□□□□ -0.51
FN1-217ENST00000471193 FUT11Q495W5 492 aa11.89□□□□□ -0.51
FN1-217ENST00000471193 SLC45A4Q5BKX6 768 aa11.89□□□□□ -0.51
FN1-217ENST00000471193 RNF219Q5W0B1 726 aaPredicted RBP11.89□□□□□ -0.51
FN1-217ENST00000471193 ARHGAP36Q6ZRI8 547 aa11.89□□□□□ -0.51
FN1-217ENST00000471193 KIAA0907Q7Z7F0 614 aaPredicted RBP11.89□□□□□ -0.51
FN1-217ENST00000471193 CTAGE6Q86UF2 777 aa11.89□□□□□ -0.51
FN1-217ENST00000471193 ZC3H18Q86VM9 953 aaKnown RBP11.89□□□□□ -0.51
FN1-217ENST00000471193 CTAGE4Q8IX94 777 aa11.89□□□□□ -0.51
FN1-217ENST00000471193 DCAF4L2Q8NA75 395 aa11.89□□□□□ -0.51
FN1-217ENST00000471193 TFB1MQ8WVM0 346 aaKnown RBP11.89□□□□□ -0.51
FN1-217ENST00000471193 MAGOHBQ96A72 148 aaKnown RBP11.89□□□□□ -0.51
FN1-217ENST00000471193 TSGA13Q96PP4 275 aa11.89□□□□□ -0.51
FN1-217ENST00000471193 LGMNQ99538 433 aa11.89□□□□□ -0.51
FN1-217ENST00000471193 FEM1AQ9BSK4 669 aa11.89□□□□□ -0.51
FN1-217ENST00000471193 ACE2Q9BYF1 805 aaPredicted RBP11.89□□□□□ -0.51
FN1-217ENST00000471193 DDX47Q9H0S4 455 aaKnown RBP11.89□□□□□ -0.51
FN1-217ENST00000471193 MUC3BQ9H195 1237 aa11.89□□□□□ -0.51
FN1-217ENST00000471193 ATP13A1Q9HD20 1204 aa11.89□□□□□ -0.51
FN1-217ENST00000471193 ABCB8Q9NUT2 735 aa11.89□□□□□ -0.51
FN1-217ENST00000471193 DNAJC17Q9NVM6 304 aaKnown RBP11.89□□□□□ -0.51
FN1-217ENST00000471193 KIAA1522Q9P206 1035 aaPredicted RBP11.89□□□□□ -0.51
FN1-217ENST00000471193 GGA2Q9UJY4 613 aa11.89□□□□□ -0.51
FN1-217ENST00000471193 SLC27A6Q9Y2P4 619 aa11.89□□□□□ -0.51
FN1-217ENST00000471193 TICRRQ7Z2Z1 1910 aa11.89□□□□□ -0.51
FN1-217ENST00000471193 PRUNE2Q8WUY3 3088 aa11.88□□□□□ -0.51
FN1-217ENST00000471193 BCLAF3A2AJT9 711 aaKnown RBP11.88□□□□□ -0.51
FN1-217ENST00000471193 C19orf67A6NJJ6 358 aa11.88□□□□□ -0.51
FN1-217ENST00000471193 H7C0C1 242 aa11.88□□□□□ -0.51
FN1-217ENST00000471193 MAFKO60675 156 aa11.88□□□□□ -0.51
FN1-217ENST00000471193 PRAMEF11O60813 436 aa11.88□□□□□ -0.51
FN1-217ENST00000471193 TULP3O75386 442 aa11.88□□□□□ -0.51
FN1-217ENST00000471193 ZNF189O75820 626 aaPredicted RBP11.88□□□□□ -0.51
FN1-217ENST00000471193 ITGAVP06756 1048 aa11.88□□□□□ -0.51
FN1-217ENST00000471193 CISD3P0C7P0 127 aa11.88□□□□□ -0.51
FN1-217ENST00000471193 PABPC1P11940 636 aaKnown RBP11.88□□□□□ -0.51
FN1-217ENST00000471193 ATP5OP48047 213 aa11.88□□□□□ -0.51
FN1-217ENST00000471193 DGKGP49619 791 aa11.88□□□□□ -0.51
FN1-217ENST00000471193 PLK1P53350 603 aa11.88□□□□□ -0.51
FN1-217ENST00000471193 TDGQ13569 410 aa11.88□□□□□ -0.51
FN1-217ENST00000471193 PITRM1Q5JRX3 1037 aa11.88□□□□□ -0.51
FN1-217ENST00000471193 CCDC137Q6PK04 289 aaKnown RBP11.88□□□□□ -0.51
FN1-217ENST00000471193 KLHL7Q8IXQ5 586 aa11.88□□□□□ -0.51
FN1-217ENST00000471193 CCDC13Q8IYE1 715 aa11.88□□□□□ -0.51
FN1-217ENST00000471193 AHI1Q8N157 1196 aa11.88□□□□□ -0.51
FN1-217ENST00000471193 PHTF2Q8N3S3 785 aa11.88□□□□□ -0.51
FN1-217ENST00000471193 NAT16Q8N8M0 369 aa11.88□□□□□ -0.51
FN1-217ENST00000471193 TTC8Q8TAM2 541 aa11.88□□□□□ -0.51
FN1-217ENST00000471193 CSGALNACT1Q8TDX6 532 aa11.88□□□□□ -0.51
FN1-217ENST00000471193 WFIKKN2Q8TEU8 576 aa11.88□□□□□ -0.51
FN1-217ENST00000471193 LRRN4Q8WUT4 740 aa11.88□□□□□ -0.51
FN1-217ENST00000471193 ATXN2LQ8WWM7 1075 aaKnown RBP11.88□□□□□ -0.51
FN1-217ENST00000471193 FATE1Q969F0 183 aa11.88□□□□□ -0.51
FN1-217ENST00000471193 RUNDC3BQ96NL0 473 aa11.88□□□□□ -0.51
FN1-217ENST00000471193 PDFQ9HBH1 243 aa11.88□□□□□ -0.51
FN1-217ENST00000471193 SLC2A4RGQ9NR83 387 aa11.88□□□□□ -0.51
FN1-217ENST00000471193 IPO11Q9UI26 975 aaKnown RBP11.88□□□□□ -0.51
FN1-217ENST00000471193 VPS28Q9UK41 221 aa11.88□□□□□ -0.51
FN1-217ENST00000471193 INTS6Q9UL03 887 aaKnown RBP11.88□□□□□ -0.51
FN1-217ENST00000471193 CFAP69A5D8W1 941 aa11.87□□□□□ -0.51
FN1-217ENST00000471193 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.87□□□□□ -0.51
FN1-217ENST00000471193 TRIM24O15164 1050 aa11.87□□□□□ -0.51
FN1-217ENST00000471193 KDELR3O43731 214 aa11.87□□□□□ -0.51
FN1-217ENST00000471193 NARSO43776 548 aaKnown RBP11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms