RNA–Protein interactions for RNA: ENST00000469852.5

COL9A3-209, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 901 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-209ENST00000469852 KIF5CO60282 957 aa15.16■□□□□ 0.02
COL9A3-209ENST00000469852 SNAP91O60641 907 aa15.16■□□□□ 0.02
COL9A3-209ENST00000469852 MAP3K6O95382 1288 aa15.16■□□□□ 0.02
COL9A3-209ENST00000469852 ATP1A1P05023 1023 aaKnown RBP15.16■□□□□ 0.02
COL9A3-209ENST00000469852 CHRNB1P11230 501 aa15.16■□□□□ 0.02
COL9A3-209ENST00000469852 GNA12Q03113 381 aa15.16■□□□□ 0.02
COL9A3-209ENST00000469852 GRSF1Q12849 480 aaKnown RBP eCLIP15.16■□□□□ 0.02
COL9A3-209ENST00000469852 C6orf118Q5T5N4 469 aa15.16■□□□□ 0.02
COL9A3-209ENST00000469852 AFMIDQ63HM1 303 aa15.16■□□□□ 0.02
COL9A3-209ENST00000469852 KAZNQ674X7 775 aa15.16■□□□□ 0.02
COL9A3-209ENST00000469852 MBLAC2Q68D91 279 aa15.16■□□□□ 0.02
COL9A3-209ENST00000469852 PKN3Q6P5Z2 889 aa15.16■□□□□ 0.02
COL9A3-209ENST00000469852 Q6ZS52 159 aa15.16■□□□□ 0.02
COL9A3-209ENST00000469852 CCDC50Q8IVM0 306 aa15.16■□□□□ 0.02
COL9A3-209ENST00000469852 CCDC117Q8IWD4 279 aaPredicted RBP15.16■□□□□ 0.02
COL9A3-209ENST00000469852 CCDC105Q8IYK2 499 aa15.16■□□□□ 0.02
COL9A3-209ENST00000469852 RCOR2Q8IZ40 523 aa15.16■□□□□ 0.02
COL9A3-209ENST00000469852 AHI1Q8N157 1196 aa15.16■□□□□ 0.02
COL9A3-209ENST00000469852 UMODL1-AS1Q8N2C9 162 aa15.16■□□□□ 0.02
COL9A3-209ENST00000469852 UBL4BQ8N7F7 174 aa15.16■□□□□ 0.02
COL9A3-209ENST00000469852 PLD5Q8N7P1 536 aa15.16■□□□□ 0.02
COL9A3-209ENST00000469852 FLCNQ8NFG4 579 aa15.16■□□□□ 0.02
COL9A3-209ENST00000469852 CYB5D2Q8WUJ1 264 aa15.16■□□□□ 0.02
COL9A3-209ENST00000469852 ARHGEF2Q92974 986 aaKnown RBP15.16■□□□□ 0.02
COL9A3-209ENST00000469852 HMCESQ96FZ2 354 aa15.16■□□□□ 0.02
COL9A3-209ENST00000469852 RBM41Q96IZ5 413 aaKnown RBP15.16■□□□□ 0.02
COL9A3-209ENST00000469852 WDR24Q96S15 920 aa15.16■□□□□ 0.02
COL9A3-209ENST00000469852 SLC39A8Q9C0K1 460 aa15.16■□□□□ 0.02
COL9A3-209ENST00000469852 MUC3BQ9H195 1237 aa15.16■□□□□ 0.02
COL9A3-209ENST00000469852 LRRC19Q9H756 370 aa15.16■□□□□ 0.02
COL9A3-209ENST00000469852 ACTL7AQ9Y615 435 aa15.16■□□□□ 0.02
COL9A3-209ENST00000469852 WDFY4Q6ZS81 3184 aa15.16■□□□□ 0.02
COL9A3-209ENST00000469852 ZNF318Q5VUA4 2279 aa15.15■□□□□ 0.02
COL9A3-209ENST00000469852 FAM170BA6NMN3 283 aa15.15■□□□□ 0.02
COL9A3-209ENST00000469852 ZNF487B1APH4 448 aa15.15■□□□□ 0.02
COL9A3-209ENST00000469852 RASA4BC9J798 803 aa15.15■□□□□ 0.02
COL9A3-209ENST00000469852 RASA4O43374 803 aa15.15■□□□□ 0.02
COL9A3-209ENST00000469852 PI15O43692 258 aa15.15■□□□□ 0.02
COL9A3-209ENST00000469852 RAMP2O60895 175 aa15.15■□□□□ 0.02
COL9A3-209ENST00000469852 DRD1P21728 446 aa15.15■□□□□ 0.02
COL9A3-209ENST00000469852 KIR2DL1P43626 348 aaPredicted RBP15.15■□□□□ 0.02
COL9A3-209ENST00000469852 PLK1P53350 603 aa15.15■□□□□ 0.02
COL9A3-209ENST00000469852 DYNLT1P63172 113 aa15.15■□□□□ 0.02
COL9A3-209ENST00000469852 NHLH1Q02575 133 aa15.15■□□□□ 0.02
COL9A3-209ENST00000469852 GBE1Q04446 702 aa15.15■□□□□ 0.02
COL9A3-209ENST00000469852 SLC10A2Q12908 348 aaPredicted RBP15.15■□□□□ 0.02
COL9A3-209ENST00000469852 PAFAH1B3Q15102 231 aaKnown RBP15.15■□□□□ 0.02
COL9A3-209ENST00000469852 RPS6KA1Q15418 735 aa15.15■□□□□ 0.02
COL9A3-209ENST00000469852 TFDP3Q5H9I0 405 aa15.15■□□□□ 0.02
COL9A3-209ENST00000469852 EGFLAMQ63HQ2 1017 aa15.15■□□□□ 0.02
COL9A3-209ENST00000469852 SLC9A4Q6AI14 798 aa15.15■□□□□ 0.02
COL9A3-209ENST00000469852 TMCO3Q6UWJ1 677 aa15.15■□□□□ 0.02
COL9A3-209ENST00000469852 NPNTQ6UXI9 565 aa15.15■□□□□ 0.02
COL9A3-209ENST00000469852 ARHGAP36Q6ZRI8 547 aa15.15■□□□□ 0.02
COL9A3-209ENST00000469852 VSIG1Q86XK7 387 aa15.15■□□□□ 0.02
COL9A3-209ENST00000469852 RFX6Q8HWS3 928 aa15.15■□□□□ 0.02
COL9A3-209ENST00000469852 SUGP1Q8IWZ8 645 aaKnown RBP15.15■□□□□ 0.02
COL9A3-209ENST00000469852 PJA1Q8NG27 643 aa15.15■□□□□ 0.02
COL9A3-209ENST00000469852 WFIKKN2Q8TEU8 576 aa15.15■□□□□ 0.02
COL9A3-209ENST00000469852 ACOX2Q99424 681 aa15.15■□□□□ 0.02
COL9A3-209ENST00000469852 HEMGNQ9BXL5 484 aa15.15■□□□□ 0.02
COL9A3-209ENST00000469852 CIPCQ9C0C6 399 aa15.15■□□□□ 0.02
COL9A3-209ENST00000469852 KCNH6Q9H252 994 aa15.15■□□□□ 0.02
COL9A3-209ENST00000469852 RETREG1Q9H6L5 497 aa15.15■□□□□ 0.02
COL9A3-209ENST00000469852 POLR3BQ9NW08 1133 aaPredicted RBP15.15■□□□□ 0.02
COL9A3-209ENST00000469852 ELOVL2Q9NXB9 296 aa15.15■□□□□ 0.02
COL9A3-209ENST00000469852 VPS28Q9UK41 221 aa15.15■□□□□ 0.02
COL9A3-209ENST00000469852 MYO18AQ92614 2054 aaKnown RBP15.15■□□□□ 0.02
COL9A3-209ENST00000469852 STK25O00506 426 aa15.14■□□□□ 0.01
COL9A3-209ENST00000469852 RNF40O75150 1001 aa15.14■□□□□ 0.01
COL9A3-209ENST00000469852 ZMPSTE24O75844 475 aa15.14■□□□□ 0.01
COL9A3-209ENST00000469852 TIE1P35590 1138 aa15.14■□□□□ 0.01
COL9A3-209ENST00000469852 TNFRSF4P43489 277 aa15.14■□□□□ 0.01
COL9A3-209ENST00000469852 STK19P49842 368 aaPredicted RBP15.14■□□□□ 0.01
COL9A3-209ENST00000469852 PAPOLAP51003 745 aaKnown RBP15.14■□□□□ 0.01
COL9A3-209ENST00000469852 GNG11P61952 73 aa15.14■□□□□ 0.01
COL9A3-209ENST00000469852 SLC12A1Q13621 1099 aa15.14■□□□□ 0.01
COL9A3-209ENST00000469852 GAS6Q14393 721 aa15.14■□□□□ 0.01
COL9A3-209ENST00000469852 POLD3Q15054 466 aaPredicted RBP15.14■□□□□ 0.01
COL9A3-209ENST00000469852 PPP2R5EQ16537 467 aa15.14■□□□□ 0.01
COL9A3-209ENST00000469852 PTPRNQ16849 979 aa15.14■□□□□ 0.01
COL9A3-209ENST00000469852 ODF2Q5BJF6 829 aa15.14■□□□□ 0.01
COL9A3-209ENST00000469852 C1orf228Q6PIY5 440 aa15.14■□□□□ 0.01
COL9A3-209ENST00000469852 ZNF783Q6ZMS7 281 aa15.14■□□□□ 0.01
COL9A3-209ENST00000469852 LEKR1Q6ZMV7 388 aa15.14■□□□□ 0.01
COL9A3-209ENST00000469852 ZNF557Q8N988 423 aaPredicted RBP15.14■□□□□ 0.01
COL9A3-209ENST00000469852 LRRN4Q8WUT4 740 aa15.14■□□□□ 0.01
COL9A3-209ENST00000469852 TTC17Q96AE7 1141 aa15.14■□□□□ 0.01
COL9A3-209ENST00000469852 MYO19Q96H55 970 aa15.14■□□□□ 0.01
COL9A3-209ENST00000469852 MRGPRX3Q96LB0 322 aa15.14■□□□□ 0.01
COL9A3-209ENST00000469852 SPON2Q9BUD6 331 aa15.14■□□□□ 0.01
COL9A3-209ENST00000469852 ACE2Q9BYF1 805 aaPredicted RBP15.14■□□□□ 0.01
COL9A3-209ENST00000469852 MAGEH1Q9H213 219 aa15.14■□□□□ 0.01
COL9A3-209ENST00000469852 MFSD1Q9H3U5 465 aa15.14■□□□□ 0.01
COL9A3-209ENST00000469852 LMAN1LQ9HAT1 526 aa15.14■□□□□ 0.01
COL9A3-209ENST00000469852 ATP13A1Q9HD20 1204 aa15.14■□□□□ 0.01
COL9A3-209ENST00000469852 SAE1Q9UBE0 346 aaPredicted RBP15.14■□□□□ 0.01
COL9A3-209ENST00000469852 VPS51Q9UID3 782 aa15.14■□□□□ 0.01
COL9A3-209ENST00000469852 JRKLQ9Y4A0 524 aa15.14■□□□□ 0.01
COL9A3-209ENST00000469852 TCRBV7S2A1N4TA0A589 114 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms