RNA–Protein interactions for RNA: ENST00000464867.1

APP-213, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 816 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-213ENST00000464867 GOT1P17174 413 aa9.78□□□□□ -0.84
APP-213ENST00000464867 POLR2EP19388 210 aaKnown RBP9.78□□□□□ -0.84
APP-213ENST00000464867 SLC8A1P32418 973 aa9.78□□□□□ -0.84
APP-213ENST00000464867 ATP1A2P50993 1020 aa9.78□□□□□ -0.84
APP-213ENST00000464867 EIF3IQ13347 325 aaKnown RBP9.78□□□□□ -0.84
APP-213ENST00000464867 ZNF177Q13360 481 aaPredicted RBP9.78□□□□□ -0.84
APP-213ENST00000464867 DHX8Q14562 1220 aaKnown RBP9.78□□□□□ -0.84
APP-213ENST00000464867 CST6Q15828 149 aa9.78□□□□□ -0.84
APP-213ENST00000464867 DUOXA2Q1HG44 320 aa9.78□□□□□ -0.84
APP-213ENST00000464867 MPPE1Q53F39 396 aa9.78□□□□□ -0.84
APP-213ENST00000464867 AHI1Q8N157 1196 aa9.78□□□□□ -0.84
APP-213ENST00000464867 FBXO39Q8N4B4 442 aa9.78□□□□□ -0.84
APP-213ENST00000464867 SSC4DQ8WTU2 575 aa9.78□□□□□ -0.84
APP-213ENST00000464867 MOCOSQ96EN8 888 aa9.78□□□□□ -0.84
APP-213ENST00000464867 SAAL1Q96ER3 474 aa9.78□□□□□ -0.84
APP-213ENST00000464867 CDK5RAP1Q96SZ6 601 aaKnown RBP9.78□□□□□ -0.84
APP-213ENST00000464867 FOXP1Q9H334 677 aaPredicted RBP9.78□□□□□ -0.84
APP-213ENST00000464867 DPEP3Q9H4B8 488 aa9.78□□□□□ -0.84
APP-213ENST00000464867 PDE11AQ9HCR9 933 aa9.78□□□□□ -0.84
APP-213ENST00000464867 KLHL11Q9NVR0 708 aa9.78□□□□□ -0.84
APP-213ENST00000464867 UCKL1Q9NWZ5 548 aa9.78□□□□□ -0.84
APP-213ENST00000464867 MED13Q9UHV7 2174 aa9.78□□□□□ -0.84
APP-213ENST00000464867 SLC12A8A0AV02 714 aa9.77□□□□□ -0.85
APP-213ENST00000464867 SERTM1A2A2V5 107 aa9.77□□□□□ -0.85
APP-213ENST00000464867 PRAMEF26H0Y7S4 382 aa9.77□□□□□ -0.85
APP-213ENST00000464867 TMX2-CTNND1H3BSU7 103 aa9.77□□□□□ -0.85
APP-213ENST00000464867 PLD2O14939 933 aa9.77□□□□□ -0.85
APP-213ENST00000464867 MDM4O15151 490 aa9.77□□□□□ -0.85
APP-213ENST00000464867 LATO43561 262 aa9.77□□□□□ -0.85
APP-213ENST00000464867 RALAP11233 206 aa9.77□□□□□ -0.85
APP-213ENST00000464867 CORO1AP31146 461 aaKnown RBP9.77□□□□□ -0.85
APP-213ENST00000464867 ZNF131P52739 623 aa9.77□□□□□ -0.85
APP-213ENST00000464867 ADPRHP54922 357 aa9.77□□□□□ -0.85
APP-213ENST00000464867 POLE2P56282 527 aa9.77□□□□□ -0.85
APP-213ENST00000464867 CYP4F2P78329 520 aa9.77□□□□□ -0.85
APP-213ENST00000464867 GUCY1B3Q02153 619 aa9.77□□□□□ -0.85
APP-213ENST00000464867 ANKRD1Q15327 319 aa9.77□□□□□ -0.85
APP-213ENST00000464867 SURF1Q15526 300 aa9.77□□□□□ -0.85
APP-213ENST00000464867 CDKN3Q16667 212 aa9.77□□□□□ -0.85
APP-213ENST00000464867 HYIQ5T013 277 aa9.77□□□□□ -0.85
APP-213ENST00000464867 ZNF468Q5VIY5 522 aaPredicted RBP9.77□□□□□ -0.85
APP-213ENST00000464867 SCARA3Q6AZY7 606 aa9.77□□□□□ -0.85
APP-213ENST00000464867 ZCCHC8Q6NZY4 707 aaKnown RBP9.77□□□□□ -0.85
APP-213ENST00000464867 EFL1Q7Z2Z2 1120 aaKnown RBP9.77□□□□□ -0.85
APP-213ENST00000464867 FAM35AQ86V20 835 aa9.77□□□□□ -0.85
APP-213ENST00000464867 TICAM1Q8IUC6 712 aa9.77□□□□□ -0.85
APP-213ENST00000464867 DENND1CQ8IV53 801 aa9.77□□□□□ -0.85
APP-213ENST00000464867 MMAAQ8IVH4 418 aaKnown RBP9.77□□□□□ -0.85
APP-213ENST00000464867 SRRM1Q8IYB3 904 aaKnown RBP9.77□□□□□ -0.85
APP-213ENST00000464867 CPXM2Q8N436 756 aa9.77□□□□□ -0.85
APP-213ENST00000464867 GLMNQ92990 594 aa9.77□□□□□ -0.85
APP-213ENST00000464867 HVCN1Q96D96 273 aa9.77□□□□□ -0.85
APP-213ENST00000464867 P2RY11Q96G91 374 aa9.77□□□□□ -0.85
APP-213ENST00000464867 TNIP3Q96KP6 325 aa9.77□□□□□ -0.85
APP-213ENST00000464867 FUCA2Q9BTY2 467 aa9.77□□□□□ -0.85
APP-213ENST00000464867 MMTAG2Q9BU76 263 aaKnown RBP9.77□□□□□ -0.85
APP-213ENST00000464867 STRADBQ9C0K7 418 aa9.77□□□□□ -0.85
APP-213ENST00000464867 INTS13Q9NVM9 706 aa9.77□□□□□ -0.85
APP-213ENST00000464867 SERGEFQ9UGK8 458 aa9.77□□□□□ -0.85
APP-213ENST00000464867 NUDT5Q9UKK9 219 aa9.77□□□□□ -0.85
APP-213ENST00000464867 ACSL6Q9UKU0 697 aa9.77□□□□□ -0.85
APP-213ENST00000464867 AGO1Q9UL18 857 aaKnown RBP9.77□□□□□ -0.85
APP-213ENST00000464867 CLEC4EQ9ULY5 219 aa9.77□□□□□ -0.85
APP-213ENST00000464867 RP1P56715 2156 aa9.77□□□□□ -0.85
APP-213ENST00000464867 DOCK9Q9BZ29 2069 aa9.76□□□□□ -0.85
APP-213ENST00000464867 A0A087X0B3 334 aa9.76□□□□□ -0.85
APP-213ENST00000464867 A1L4Q6 167 aa9.76□□□□□ -0.85
APP-213ENST00000464867 PMS2P1A4D2B8 440 aa9.76□□□□□ -0.85
APP-213ENST00000464867 SCAMP1O15126 338 aa9.76□□□□□ -0.85
APP-213ENST00000464867 RTN2O75298 545 aa9.76□□□□□ -0.85
APP-213ENST00000464867 VPS4BO75351 444 aa9.76□□□□□ -0.85
APP-213ENST00000464867 PIAS2O75928 621 aa9.76□□□□□ -0.85
APP-213ENST00000464867 KLKB1P03952 638 aa9.76□□□□□ -0.85
APP-213ENST00000464867 HMBSP08397 361 aa9.76□□□□□ -0.85
APP-213ENST00000464867 TRIM21P19474 475 aaKnown RBP9.76□□□□□ -0.85
APP-213ENST00000464867 HLA-FP30511 346 aa9.76□□□□□ -0.85
APP-213ENST00000464867 PRPHP41219 470 aa9.76□□□□□ -0.85
APP-213ENST00000464867 PGFP49763 221 aa9.76□□□□□ -0.85
APP-213ENST00000464867 SRSF6Q13247 344 aaKnown RBP9.76□□□□□ -0.85
APP-213ENST00000464867 SPIDRQ14159 915 aa9.76□□□□□ -0.85
APP-213ENST00000464867 KRTAP21-3Q3LHN1 58 aa9.76□□□□□ -0.85
APP-213ENST00000464867 WDR72Q3MJ13 1102 aa9.76□□□□□ -0.85
APP-213ENST00000464867 SETMARQ53H47 684 aaPredicted RBP9.76□□□□□ -0.85
APP-213ENST00000464867 MBLAC2Q68D91 279 aa9.76□□□□□ -0.85
APP-213ENST00000464867 CHSY3Q70JA7 882 aa9.76□□□□□ -0.85
APP-213ENST00000464867 RAB11FIP2Q7L804 512 aa9.76□□□□□ -0.85
APP-213ENST00000464867 VASH2Q86V25 355 aa9.76□□□□□ -0.85
APP-213ENST00000464867 SYCP3Q8IZU3 236 aa9.76□□□□□ -0.85
APP-213ENST00000464867 TSEN2Q8NCE0 465 aaKnown RBP9.76□□□□□ -0.85
APP-213ENST00000464867 C9orf43Q8TAL5 461 aaPredicted RBP9.76□□□□□ -0.85
APP-213ENST00000464867 MIB2Q96AX9 1013 aa9.76□□□□□ -0.85
APP-213ENST00000464867 FAM84AQ96KN4 292 aa9.76□□□□□ -0.85
APP-213ENST00000464867 ST6GALNAC4Q9H4F1 302 aa9.76□□□□□ -0.85
APP-213ENST00000464867 ZNF768Q9H5H4 540 aaKnown RBP9.76□□□□□ -0.85
APP-213ENST00000464867 SYNDIG1Q9H7V2 258 aa9.76□□□□□ -0.85
APP-213ENST00000464867 KRT82Q9NSB4 513 aa9.76□□□□□ -0.85
APP-213ENST00000464867 ABCB8Q9NUT2 735 aa9.76□□□□□ -0.85
APP-213ENST00000464867 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.76□□□□□ -0.85
APP-213ENST00000464867 RASAL2Q9UJF2 1139 aa9.76□□□□□ -0.85
APP-213ENST00000464867 GGA2Q9UJY4 613 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms