RNA–Protein interactions for RNA: ENST00000463684.1

SMC1A-204, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 2

Gene SMC1A, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-204ENST00000463684 TJP2Q9UDY2 1190 aa14.93□□□□□ -0.02
SMC1A-204ENST00000463684 MYLKQ15746 1914 aa14.93□□□□□ -0.02
SMC1A-204ENST00000463684 A0A1B0GVM2 712 aa14.92□□□□□ -0.02
SMC1A-204ENST00000463684 NEMP2A6NFY4 417 aa14.92□□□□□ -0.02
SMC1A-204ENST00000463684 C1QTNF3-AMACRE9PGA6 284 aa14.92□□□□□ -0.02
SMC1A-204ENST00000463684 PYCARD-AS1I3L0S3 204 aa14.92□□□□□ -0.02
SMC1A-204ENST00000463684 SLC28A2O43868 658 aa14.92□□□□□ -0.02
SMC1A-204ENST00000463684 WISP1O95388 367 aa14.92□□□□□ -0.02
SMC1A-204ENST00000463684 APOEP02649 317 aa14.92□□□□□ -0.02
SMC1A-204ENST00000463684 RBMS1P29558 406 aaKnown RBP14.92□□□□□ -0.02
SMC1A-204ENST00000463684 METAP1P53582 386 aa14.92□□□□□ -0.02
SMC1A-204ENST00000463684 CNTN1Q12860 1018 aa14.92□□□□□ -0.02
SMC1A-204ENST00000463684 NNTQ13423 1086 aa14.92□□□□□ -0.02
SMC1A-204ENST00000463684 TCERG1LQ5VWI1 586 aa14.92□□□□□ -0.02
SMC1A-204ENST00000463684 RAP1GAP2Q684P5 730 aa14.92□□□□□ -0.02
SMC1A-204ENST00000463684 DQX1Q8TE96 717 aaKnown RBP14.92□□□□□ -0.02
SMC1A-204ENST00000463684 CLEC4CQ8WTT0 213 aa14.92□□□□□ -0.02
SMC1A-204ENST00000463684 CCDC97Q96F63 343 aaPredicted RBP14.92□□□□□ -0.02
SMC1A-204ENST00000463684 VCPIP1Q96JH7 1222 aa14.92□□□□□ -0.02
SMC1A-204ENST00000463684 HSFY1Q96LI6 401 aa14.92□□□□□ -0.02
SMC1A-204ENST00000463684 PPP1R9BQ96SB3 815 aa14.92□□□□□ -0.02
SMC1A-204ENST00000463684 MIS12Q9H081 205 aa14.92□□□□□ -0.02
SMC1A-204ENST00000463684 USP29Q9HBJ7 922 aa14.92□□□□□ -0.02
SMC1A-204ENST00000463684 PREBQ9HCU5 417 aa14.92□□□□□ -0.02
SMC1A-204ENST00000463684 CA5BQ9Y2D0 317 aa14.92□□□□□ -0.02
SMC1A-204ENST00000463684 A0A1B0GVL5 298 aa14.91□□□□□ -0.02
SMC1A-204ENST00000463684 K7ELQ4 463 aaPredicted RBP14.91□□□□□ -0.02
SMC1A-204ENST00000463684 M0QYV0 167 aa14.91□□□□□ -0.02
SMC1A-204ENST00000463684 CETN3O15182 167 aa14.91□□□□□ -0.02
SMC1A-204ENST00000463684 SLC31A1O15431 190 aa14.91□□□□□ -0.02
SMC1A-204ENST00000463684 GABBR2O75899 941 aa14.91□□□□□ -0.02
SMC1A-204ENST00000463684 PAEPP09466 180 aa14.91□□□□□ -0.02
SMC1A-204ENST00000463684 PFKFB1P16118 471 aa14.91□□□□□ -0.02
SMC1A-204ENST00000463684 PDGFRAP16234 1089 aa14.91□□□□□ -0.02
SMC1A-204ENST00000463684 TACR2P21452 398 aa14.91□□□□□ -0.02
SMC1A-204ENST00000463684 TBXAS1P24557 533 aaPredicted RBP14.91□□□□□ -0.02
SMC1A-204ENST00000463684 NUMBP49757 651 aa14.91□□□□□ -0.02
SMC1A-204ENST00000463684 OXCT1P55809 520 aa14.91□□□□□ -0.02
SMC1A-204ENST00000463684 CCDC15Q0P6D6 951 aa14.91□□□□□ -0.02
SMC1A-204ENST00000463684 STILQ15468 1287 aa14.91□□□□□ -0.02
SMC1A-204ENST00000463684 CNGA2Q16280 664 aa14.91□□□□□ -0.02
SMC1A-204ENST00000463684 EDRF1Q3B7T1 1238 aa14.91□□□□□ -0.02
SMC1A-204ENST00000463684 DCAF17Q5H9S7 520 aaPredicted RBP14.91□□□□□ -0.02
SMC1A-204ENST00000463684 AGBL4Q5VU57 503 aa14.91□□□□□ -0.02
SMC1A-204ENST00000463684 CHSY1Q86X52 802 aa14.91□□□□□ -0.02
SMC1A-204ENST00000463684 MAPK15Q8TD08 544 aa14.91□□□□□ -0.02
SMC1A-204ENST00000463684 FRS2Q8WU20 508 aa14.91□□□□□ -0.02
SMC1A-204ENST00000463684 FAM149B1Q96BN6 582 aa14.91□□□□□ -0.02
SMC1A-204ENST00000463684 SLC39A13Q96H72 371 aa14.91□□□□□ -0.02
SMC1A-204ENST00000463684 APOLD1Q96LR9 279 aa14.91□□□□□ -0.02
SMC1A-204ENST00000463684 MYOCQ99972 504 aa14.91□□□□□ -0.02
SMC1A-204ENST00000463684 DUSP23Q9BVJ7 150 aa14.91□□□□□ -0.02
SMC1A-204ENST00000463684 CALN1Q9BXU9 219 aa14.91□□□□□ -0.02
SMC1A-204ENST00000463684 ASCL3Q9NQ33 180 aa14.91□□□□□ -0.02
SMC1A-204ENST00000463684 NLGN3Q9NZ94 848 aa14.91□□□□□ -0.02
SMC1A-204ENST00000463684 SLC25A13Q9UJS0 675 aa14.91□□□□□ -0.02
SMC1A-204ENST00000463684 RCOR1Q9UKL0 485 aa14.91□□□□□ -0.02
SMC1A-204ENST00000463684 SARDHQ9UL12 918 aa14.91□□□□□ -0.02
SMC1A-204ENST00000463684 PPM1HQ9ULR3 514 aa14.91□□□□□ -0.02
SMC1A-204ENST00000463684 NAALADL1Q9UQQ1 740 aa14.91□□□□□ -0.02
SMC1A-204ENST00000463684 COQ4Q9Y3A0 265 aa14.91□□□□□ -0.02
SMC1A-204ENST00000463684 TP53BP1Q12888 1972 aaPredicted RBP14.91□□□□□ -0.02
SMC1A-204ENST00000463684 MAST4O15021 2626 aa14.9□□□□□ -0.02
SMC1A-204ENST00000463684 F5H5T6 163 aa14.9□□□□□ -0.02
SMC1A-204ENST00000463684 SART1O43290 800 aaKnown RBP14.9□□□□□ -0.02
SMC1A-204ENST00000463684 PIAS2O75928 621 aa14.9□□□□□ -0.02
SMC1A-204ENST00000463684 ZSCAN22P10073 491 aaPredicted RBP14.9□□□□□ -0.02
SMC1A-204ENST00000463684 CMA1P23946 247 aa14.9□□□□□ -0.02
SMC1A-204ENST00000463684 AKT2P31751 481 aa14.9□□□□□ -0.02
SMC1A-204ENST00000463684 LRMPQ12912 555 aa14.9□□□□□ -0.02
SMC1A-204ENST00000463684 CBWD6Q4V339 395 aa14.9□□□□□ -0.02
SMC1A-204ENST00000463684 CBWD3Q5JTY5 395 aa14.9□□□□□ -0.02
SMC1A-204ENST00000463684 CBWD5Q5RIA9 395 aa14.9□□□□□ -0.02
SMC1A-204ENST00000463684 TMEM270Q6UE05 265 aa14.9□□□□□ -0.02
SMC1A-204ENST00000463684 TMEM145Q8NBT3 493 aa14.9□□□□□ -0.02
SMC1A-204ENST00000463684 TFAP2BQ92481 460 aa14.9□□□□□ -0.02
SMC1A-204ENST00000463684 KLK6Q92876 244 aa14.9□□□□□ -0.02
SMC1A-204ENST00000463684 ERCC4Q92889 916 aaPredicted RBP14.9□□□□□ -0.02
SMC1A-204ENST00000463684 RNF34Q969K3 372 aa14.9□□□□□ -0.02
SMC1A-204ENST00000463684 GRAMD1AQ96CP6 724 aa14.9□□□□□ -0.02
SMC1A-204ENST00000463684 BTN2A3PQ96KV6 586 aa14.9□□□□□ -0.02
SMC1A-204ENST00000463684 TRIM62Q9BVG3 475 aa14.9□□□□□ -0.02
SMC1A-204ENST00000463684 SLC12A6Q9UHW9 1150 aa14.9□□□□□ -0.02
SMC1A-204ENST00000463684 XPO7Q9UIA9 1087 aaKnown RBP14.9□□□□□ -0.02
SMC1A-204ENST00000463684 SATB2Q9UPW6 733 aa14.9□□□□□ -0.02
SMC1A-204ENST00000463684 FARP1Q9Y4F1 1045 aaPredicted RBP14.9□□□□□ -0.02
SMC1A-204ENST00000463684 K7ENP7 123 aa14.89□□□□□ -0.03
SMC1A-204ENST00000463684 MCF2LO15068 1137 aa14.89□□□□□ -0.03
SMC1A-204ENST00000463684 SCAMP1O15126 338 aa14.89□□□□□ -0.03
SMC1A-204ENST00000463684 ALOX15BO15296 676 aa14.89□□□□□ -0.03
SMC1A-204ENST00000463684 F13A1P00488 732 aa14.89□□□□□ -0.03
SMC1A-204ENST00000463684 FYNP06241 537 aa14.89□□□□□ -0.03
SMC1A-204ENST00000463684 MYF5P13349 255 aa14.89□□□□□ -0.03
SMC1A-204ENST00000463684 PRLRP16471 622 aa14.89□□□□□ -0.03
SMC1A-204ENST00000463684 PLK1P53350 603 aa14.89□□□□□ -0.03
SMC1A-204ENST00000463684 DLG2Q15700 870 aa14.89□□□□□ -0.03
SMC1A-204ENST00000463684 ISXQ2M1V0 245 aa14.89□□□□□ -0.03
SMC1A-204ENST00000463684 ZCWPW2Q504Y3 356 aa14.89□□□□□ -0.03
SMC1A-204ENST00000463684 ZC3H12AQ5D1E8 599 aaKnown RBP14.89□□□□□ -0.03
SMC1A-204ENST00000463684 C3orf38Q5JPI3 329 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms