RNA–Protein interactions for RNA: ENST00000462553.2

CDC42BPA-210, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 430 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-210ENST00000462553 A0A1W2PPC4 97 aa8.19□□□□□ -1.1
CDC42BPA-210ENST00000462553 A0A1W2PR77 199 aa8.19□□□□□ -1.1
CDC42BPA-210ENST00000462553 WNT9AO14904 365 aa8.19□□□□□ -1.1
CDC42BPA-210ENST00000462553 VILLO15195 856 aa8.19□□□□□ -1.1
CDC42BPA-210ENST00000462553 TBL1XO60907 577 aa8.19□□□□□ -1.1
CDC42BPA-210ENST00000462553 SIN3BO75182 1162 aa8.19□□□□□ -1.1
CDC42BPA-210ENST00000462553 IGLV3-25P01717 112 aa8.19□□□□□ -1.1
CDC42BPA-210ENST00000462553 DNTTP04053 509 aa8.19□□□□□ -1.1
CDC42BPA-210ENST00000462553 ERBB2P04626 1255 aa8.19□□□□□ -1.1
CDC42BPA-210ENST00000462553 CYP11B1P15538 503 aa8.19□□□□□ -1.1
CDC42BPA-210ENST00000462553 CHRNB2P17787 502 aa8.19□□□□□ -1.1
CDC42BPA-210ENST00000462553 PTMSP20962 102 aa8.19□□□□□ -1.1
CDC42BPA-210ENST00000462553 CSKP41240 450 aa8.19□□□□□ -1.1
CDC42BPA-210ENST00000462553 CTSOP43234 321 aaPredicted RBP8.19□□□□□ -1.1
CDC42BPA-210ENST00000462553 ACADSBP45954 432 aa8.19□□□□□ -1.1
CDC42BPA-210ENST00000462553 ZNF165P49910 485 aa8.19□□□□□ -1.1
CDC42BPA-210ENST00000462553 POLR2FP61218 127 aaKnown RBP8.19□□□□□ -1.1
CDC42BPA-210ENST00000462553 RACK1P63244 317 aaKnown RBP8.19□□□□□ -1.1
CDC42BPA-210ENST00000462553 PITX1P78337 314 aaPredicted RBP8.19□□□□□ -1.1
CDC42BPA-210ENST00000462553 PTK2Q05397 1052 aa8.19□□□□□ -1.1
CDC42BPA-210ENST00000462553 ARID5BQ14865 1188 aa8.19□□□□□ -1.1
CDC42BPA-210ENST00000462553 SUZ12Q15022 739 aaKnown RBP8.19□□□□□ -1.1
CDC42BPA-210ENST00000462553 TAF5Q15542 800 aa8.19□□□□□ -1.1
CDC42BPA-210ENST00000462553 HNRNPA1L2Q32P51 320 aaKnown RBP8.19□□□□□ -1.1
CDC42BPA-210ENST00000462553 ZSCAN23Q3MJ62 389 aa8.19□□□□□ -1.1
CDC42BPA-210ENST00000462553 TTC31Q49AM3 519 aaPredicted RBP8.19□□□□□ -1.1
CDC42BPA-210ENST00000462553 FSCBQ5H9T9 825 aa8.19□□□□□ -1.1
CDC42BPA-210ENST00000462553 FKBP15Q5T1M5 1219 aa8.19□□□□□ -1.1
CDC42BPA-210ENST00000462553 ZNF776Q68DI1 518 aaPredicted RBP8.19□□□□□ -1.1
CDC42BPA-210ENST00000462553 DHRS13Q6UX07 377 aa8.19□□□□□ -1.1
CDC42BPA-210ENST00000462553 MMS22LQ6ZRQ5 1243 aa8.19□□□□□ -1.1
CDC42BPA-210ENST00000462553 FAM183BPQ6ZVS7 135 aa8.19□□□□□ -1.1
CDC42BPA-210ENST00000462553 USP30Q70CQ3 517 aa8.19□□□□□ -1.1
CDC42BPA-210ENST00000462553 RNF139Q8WU17 664 aa8.19□□□□□ -1.1
CDC42BPA-210ENST00000462553 SLC20A1Q8WUM9 679 aa8.19□□□□□ -1.1
CDC42BPA-210ENST00000462553 GOLGA1Q92805 767 aa8.19□□□□□ -1.1
CDC42BPA-210ENST00000462553 FCRL2Q96LA5 508 aaPredicted RBP8.19□□□□□ -1.1
CDC42BPA-210ENST00000462553 IRX2Q9BZI1 471 aaPredicted RBP8.19□□□□□ -1.1
CDC42BPA-210ENST00000462553 MIS12Q9H081 205 aa8.19□□□□□ -1.1
CDC42BPA-210ENST00000462553 CBX8Q9HC52 389 aa8.19□□□□□ -1.1
CDC42BPA-210ENST00000462553 NLRC4Q9NPP4 1024 aa8.19□□□□□ -1.1
CDC42BPA-210ENST00000462553 RTN4Q9NQC3 1192 aaKnown RBP8.19□□□□□ -1.1
CDC42BPA-210ENST00000462553 ABCC13Q9NSE7 274 aa8.19□□□□□ -1.1
CDC42BPA-210ENST00000462553 FTSJ1Q9UET6 329 aa8.19□□□□□ -1.1
CDC42BPA-210ENST00000462553 NOCTQ9UK39 431 aaKnown RBP8.19□□□□□ -1.1
CDC42BPA-210ENST00000462553 PLA2G4CQ9UP65 541 aa8.19□□□□□ -1.1
CDC42BPA-210ENST00000462553 RP1P56715 2156 aa8.19□□□□□ -1.1
CDC42BPA-210ENST00000462553 ITIH6Q6UXX5 1313 aa8.19□□□□□ -1.1
CDC42BPA-210ENST00000462553 COL12A1Q99715 3063 aa8.18□□□□□ -1.1
CDC42BPA-210ENST00000462553 A0A1B0GTH6 734 aa8.18□□□□□ -1.1
CDC42BPA-210ENST00000462553 A0A1W2PP55 124 aa8.18□□□□□ -1.1
CDC42BPA-210ENST00000462553 SMTNL1A8MU46 457 aa8.18□□□□□ -1.1
CDC42BPA-210ENST00000462553 PLK4O00444 970 aa8.18□□□□□ -1.1
CDC42BPA-210ENST00000462553 MID1O15344 667 aa8.18□□□□□ -1.1
CDC42BPA-210ENST00000462553 IRAK2O43187 625 aa8.18□□□□□ -1.1
CDC42BPA-210ENST00000462553 TLX3O43711 291 aaPredicted RBP8.18□□□□□ -1.1
CDC42BPA-210ENST00000462553 ACSL4O60488 711 aa8.18□□□□□ -1.1
CDC42BPA-210ENST00000462553 GFPT2O94808 682 aa8.18□□□□□ -1.1
CDC42BPA-210ENST00000462553 ATP5BP06576 529 aaKnown RBP8.18□□□□□ -1.1
CDC42BPA-210ENST00000462553 MMEP08473 750 aa8.18□□□□□ -1.1
CDC42BPA-210ENST00000462553 POLR2EP19388 210 aaKnown RBP8.18□□□□□ -1.1
CDC42BPA-210ENST00000462553 SOX5P35711 763 aa8.18□□□□□ -1.1
CDC42BPA-210ENST00000462553 ACADVLP49748 655 aa8.18□□□□□ -1.1
CDC42BPA-210ENST00000462553 GALCP54803 685 aa8.18□□□□□ -1.1
CDC42BPA-210ENST00000462553 RPS24P62847 133 aaKnown RBP8.18□□□□□ -1.1
CDC42BPA-210ENST00000462553 NOMO3P69849 1222 aa8.18□□□□□ -1.1
CDC42BPA-210ENST00000462553 FMO1Q01740 532 aa8.18□□□□□ -1.1
CDC42BPA-210ENST00000462553 UBXN1Q04323 297 aa8.18□□□□□ -1.1
CDC42BPA-210ENST00000462553 DNAJC3Q13217 504 aa8.18□□□□□ -1.1
CDC42BPA-210ENST00000462553 EIF4EBP2Q13542 120 aaPredicted RBP8.18□□□□□ -1.1
CDC42BPA-210ENST00000462553 CST6Q15828 149 aa8.18□□□□□ -1.1
CDC42BPA-210ENST00000462553 CCDC157Q569K6 752 aa8.18□□□□□ -1.1
CDC42BPA-210ENST00000462553 PRAMEF14Q5SWL7 426 aa8.18□□□□□ -1.1
CDC42BPA-210ENST00000462553 C9orf64Q5T6V5 341 aa8.18□□□□□ -1.1
CDC42BPA-210ENST00000462553 OTUD1Q5VV17 481 aaPredicted RBP8.18□□□□□ -1.1
CDC42BPA-210ENST00000462553 TAF3Q5VWG9 929 aa8.18□□□□□ -1.1
CDC42BPA-210ENST00000462553 SYPL2Q5VXT5 272 aa8.18□□□□□ -1.1
CDC42BPA-210ENST00000462553 NUGGCQ68CJ6 796 aa8.18□□□□□ -1.1
CDC42BPA-210ENST00000462553 NCEH1Q6PIU2 408 aa8.18□□□□□ -1.1
CDC42BPA-210ENST00000462553 OLFML1Q6UWY5 402 aa8.18□□□□□ -1.1
CDC42BPA-210ENST00000462553 BEND5Q7L4P6 421 aa8.18□□□□□ -1.1
CDC42BPA-210ENST00000462553 KANSL1Q7Z3B3 1105 aa8.18□□□□□ -1.1
CDC42BPA-210ENST00000462553 TAC4Q86UU9 113 aa8.18□□□□□ -1.1
CDC42BPA-210ENST00000462553 LUZP1Q86V48 1076 aa8.18□□□□□ -1.1
CDC42BPA-210ENST00000462553 GATAD2AQ86YP4 633 aa8.18□□□□□ -1.1
CDC42BPA-210ENST00000462553 MFN1Q8IWA4 741 aa8.18□□□□□ -1.1
CDC42BPA-210ENST00000462553 AADATQ8N5Z0 425 aa8.18□□□□□ -1.1
CDC42BPA-210ENST00000462553 HJURPQ8NCD3 748 aaPredicted RBP8.18□□□□□ -1.1
CDC42BPA-210ENST00000462553 FIBINQ8TAL6 211 aa8.18□□□□□ -1.1
CDC42BPA-210ENST00000462553 DQX1Q8TE96 717 aaKnown RBP8.18□□□□□ -1.1
CDC42BPA-210ENST00000462553 SAP25Q8TEE9 199 aa8.18□□□□□ -1.1
CDC42BPA-210ENST00000462553 BAP1Q92560 729 aa8.18□□□□□ -1.1
CDC42BPA-210ENST00000462553 AZIN2Q96A70 460 aa8.18□□□□□ -1.1
CDC42BPA-210ENST00000462553 SLC39A13Q96H72 371 aa8.18□□□□□ -1.1
CDC42BPA-210ENST00000462553 PPP1R13BQ96KQ4 1090 aa8.18□□□□□ -1.1
CDC42BPA-210ENST00000462553 NAP1L5Q96NT1 182 aaPredicted RBP8.18□□□□□ -1.1
CDC42BPA-210ENST00000462553 SLC2A13Q96QE2 648 aa8.18□□□□□ -1.1
CDC42BPA-210ENST00000462553 ELF4Q99607 663 aaPredicted RBP8.18□□□□□ -1.1
CDC42BPA-210ENST00000462553 ACE2Q9BYF1 805 aaPredicted RBP8.18□□□□□ -1.1
CDC42BPA-210ENST00000462553 TTYH3Q9C0H2 523 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms